RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 PAGE4O60829 102 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 DAD1P61803 113 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 BLOC1S1P78537 153 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 CD300CQ08708 224 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 BTN1A1Q13410 526 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 PRNTQ86SH4 94 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 EIF4E3Q8N5X7 224 aaKnown RBP12.6□□□□□ -0.39
CD9-211ENST00000546073 TMEM75Q8N9X5 138 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 PHLDA1Q8WV24 401 aaPredicted RBP12.6□□□□□ -0.39
CD9-211ENST00000546073 FAM19A4Q96LR4 140 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 PSG8Q9UQ74 426 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 TRAV10A0A0B4J240 114 aa12.59□□□□□ -0.39
CD9-211ENST00000546073 TRAV21A0A0B4J279 112 aa12.59□□□□□ -0.39
CD9-211ENST00000546073 PEX7O00628 323 aa12.59□□□□□ -0.39
CD9-211ENST00000546073 S100A9P06702 114 aaKnown RBP12.59□□□□□ -0.39
CD9-211ENST00000546073 FAM222AQ5U5X8 452 aa12.59□□□□□ -0.39
CD9-211ENST00000546073 CEMP1Q6PRD7 247 aaPredicted RBP12.59□□□□□ -0.39
CD9-211ENST00000546073 TXNDC17Q9BRA2 123 aa12.59□□□□□ -0.39
CD9-211ENST00000546073 GNG13Q9P2W3 67 aa12.59□□□□□ -0.39
CD9-211ENST00000546073 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.4
CD9-211ENST00000546073 TAGLN2P37802 199 aaKnown RBP12.58□□□□□ -0.4
CD9-211ENST00000546073 AKR1C3P42330 323 aa12.58□□□□□ -0.4
CD9-211ENST00000546073 SMUG1Q53HV7 270 aa12.58□□□□□ -0.4
CD9-211ENST00000546073 ZFAND2AQ8N6M9 145 aa12.58□□□□□ -0.4
CD9-211ENST00000546073 FMC1Q96HJ9 113 aa12.58□□□□□ -0.4
CD9-211ENST00000546073 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
CD9-211ENST00000546073 TRAV8-1A0A0A6YYK1 113 aa12.57□□□□□ -0.4
CD9-211ENST00000546073 NKX2-5P52952 324 aaPredicted RBP12.57□□□□□ -0.4
CD9-211ENST00000546073 KIR3DS1Q14943 382 aa12.57□□□□□ -0.4
CD9-211ENST00000546073 C2CD4CQ8TF44 421 aa12.57□□□□□ -0.4
CD9-211ENST00000546073 KCNS1Q96KK3 526 aa12.57□□□□□ -0.4
CD9-211ENST00000546073 SGK494Q96LW2 274 aa12.57□□□□□ -0.4
CD9-211ENST00000546073 DKK2Q9UBU2 259 aa12.57□□□□□ -0.4
CD9-211ENST00000546073 NAGKQ9UJ70 344 aa12.57□□□□□ -0.4
CD9-211ENST00000546073 TRGV11A0A075B6L2 103 aa12.56□□□□□ -0.4
CD9-211ENST00000546073 ALKAL2Q6UX46 152 aa12.56□□□□□ -0.4
CD9-211ENST00000546073 LINC00467Q9BRT7 94 aa12.56□□□□□ -0.4
CD9-211ENST00000546073 PLA2G2EQ9NZK7 142 aa12.56□□□□□ -0.4
CD9-211ENST00000546073 ZFP30Q9Y2G7 519 aa12.56□□□□□ -0.4
CD9-211ENST00000546073 DNAH9Q9NYC9 4486 aa12.55□□□□□ -0.4
CD9-211ENST00000546073 ZNF324O75467 553 aaPredicted RBP12.55□□□□□ -0.4
CD9-211ENST00000546073 DEFB130BP0DP73 79 aa12.55□□□□□ -0.4
CD9-211ENST00000546073 DEFB130AP0DP74 79 aa12.55□□□□□ -0.4
CD9-211ENST00000546073 AZU1P20160 251 aa12.55□□□□□ -0.4
CD9-211ENST00000546073 ZNF415Q09FC8 603 aa12.55□□□□□ -0.4
CD9-211ENST00000546073 ANXA2RQ3ZCQ2 193 aa12.55□□□□□ -0.4
CD9-211ENST00000546073 Q6AWC8 147 aa12.55□□□□□ -0.4
CD9-211ENST00000546073 STAB2Q8WWQ8 2551 aa12.55□□□□□ -0.4
CD9-211ENST00000546073 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
CD9-211ENST00000546073 TCTAP57738 103 aa12.54□□□□□ -0.4
CD9-211ENST00000546073 SDF2L1Q9HCN8 221 aa12.54□□□□□ -0.4
CD9-211ENST00000546073 NOP10Q9NPE3 64 aaKnown RBP12.54□□□□□ -0.4
CD9-211ENST00000546073 TRAV34A0A0B4J273 112 aa12.53□□□□□ -0.4
CD9-211ENST00000546073 GCGP01275 180 aa12.53□□□□□ -0.4
CD9-211ENST00000546073 HTN3P15516 51 aa12.53□□□□□ -0.4
CD9-211ENST00000546073 ATP5G3P48201 142 aa12.53□□□□□ -0.4
CD9-211ENST00000546073 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
CD9-211ENST00000546073 MUC21Q5SSG8 566 aa12.53□□□□□ -0.4
CD9-211ENST00000546073 IBA57Q5T440 356 aaKnown RBP12.53□□□□□ -0.4
CD9-211ENST00000546073 Q6ZTC4 211 aa12.53□□□□□ -0.4
CD9-211ENST00000546073 RNASE8Q8TDE3 154 aaKnown RBP12.53□□□□□ -0.4
CD9-211ENST00000546073 CELA1Q9UNI1 258 aa12.53□□□□□ -0.4
CD9-211ENST00000546073 IGLL5B9A064 214 aa12.52□□□□□ -0.41
CD9-211ENST00000546073 PDE6DO43924 150 aa12.52□□□□□ -0.41
CD9-211ENST00000546073 PRM2P04554 102 aa12.52□□□□□ -0.41
CD9-211ENST00000546073 ZNF767PQ75MW2 155 aa12.52□□□□□ -0.41
CD9-211ENST00000546073 FABP5P3A8MUU1 101 aa12.51□□□□□ -0.41
CD9-211ENST00000546073 PFN1P07737 140 aaKnown RBP12.51□□□□□ -0.41
CD9-211ENST00000546073 TMEM183BQ1AE95 376 aa12.51□□□□□ -0.41
CD9-211ENST00000546073 VAX2Q9UIW0 290 aa12.51□□□□□ -0.41
CD9-211ENST00000546073 TENM3Q9P273 2699 aa12.5□□□□□ -0.41
CD9-211ENST00000546073 TRGV2A0A075B6R0 118 aa12.5□□□□□ -0.41
CD9-211ENST00000546073 ATP5G1P05496 136 aa12.5□□□□□ -0.41
CD9-211ENST00000546073 DAZ2Q13117 558 aaKnown RBP12.5□□□□□ -0.41
CD9-211ENST00000546073 PRR9Q5T870 116 aa12.5□□□□□ -0.41
CD9-211ENST00000546073 TMEM183AQ8IXX5 376 aa12.5□□□□□ -0.41
CD9-211ENST00000546073 FAM210BQ96KR6 192 aa12.5□□□□□ -0.41
CD9-211ENST00000546073 LINC00479Q96M42 142 aa12.5□□□□□ -0.41
CD9-211ENST00000546073 SPXQ9BT56 116 aa12.5□□□□□ -0.41
CD9-211ENST00000546073 GSN-AS1Q9NRJ2 163 aa12.5□□□□□ -0.41
CD9-211ENST00000546073 BOLA1Q9Y3E2 137 aa12.5□□□□□ -0.41
CD9-211ENST00000546073 TRBV6-1A0A0K0K1D8 114 aa12.49□□□□□ -0.41
CD9-211ENST00000546073 TCL1AP56279 114 aa12.49□□□□□ -0.41
CD9-211ENST00000546073 MEF2BQ02080 365 aaPredicted RBP12.49□□□□□ -0.41
CD9-211ENST00000546073 Q86TA4 180 aa12.49□□□□□ -0.41
CD9-211ENST00000546073 C8orf49Q96NF6 230 aa12.49□□□□□ -0.41
CD9-211ENST00000546073 TRGV1A0A0A0MS02 117 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 GAGE12BA1L429 117 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 GAGE7O76087 117 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 IGLV2-11P01706 119 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 BCL2P10415 239 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 S100A4P26447 101 aaKnown RBP12.48□□□□□ -0.41
CD9-211ENST00000546073 CCL20P78556 96 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 BAGE2Q86Y30 109 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 TVP23CQ96ET8 276 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 NDUFAF3Q9BU61 184 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 MED9Q9NWA0 146 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms