RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 E9PLD3 99 aa6.74□□□□□ -1.33
TDP1-204ENST00000545686 GTSCR1Q86UQ5 136 aa6.74□□□□□ -1.33
TDP1-204ENST00000545686 MRAP2Q96G30 205 aa6.74□□□□□ -1.33
TDP1-204ENST00000545686 TACC2O95359 2948 aa6.74□□□□□ -1.33
TDP1-204ENST00000545686 IGHV7-4-1A0A0J9YVY3 117 aa6.74□□□□□ -1.33
TDP1-204ENST00000545686 GATA1P15976 413 aaPredicted RBP6.74□□□□□ -1.33
TDP1-204ENST00000545686 TMEM78Q5T7P6 136 aa6.74□□□□□ -1.33
TDP1-204ENST00000545686 C9orf47Q6ZRZ4 202 aa6.74□□□□□ -1.33
TDP1-204ENST00000545686 MRPL35Q9NZE8 188 aaKnown RBP6.74□□□□□ -1.33
TDP1-204ENST00000545686 ANKHD1Q8IWZ3 2542 aaKnown RBP6.73□□□□□ -1.33
TDP1-204ENST00000545686 AKAP13Q12802 2813 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 F8W1H4 67 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 K7EMI3 77 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 ZNF207O43670 478 aaKnown RBP6.73□□□□□ -1.33
TDP1-204ENST00000545686 TRGV3P03979 118 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 SCGB1A1P11684 91 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 SLC25A16P16260 332 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 C15orf32Q32M92 178 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 Q8N9W7 124 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 LINC01560Q8TB33 94 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 NHP2Q9NX24 153 aaKnown RBP6.73□□□□□ -1.33
TDP1-204ENST00000545686 TRAV40A0A0B4J280 105 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 K7ERJ3 54 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 PRR30Q53SZ7 412 aaPredicted RBP6.73□□□□□ -1.33
TDP1-204ENST00000545686 RNF182Q8N6D2 247 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 TTTY13Q9BZ97 58 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 AGPAT4-IT1Q9H0P7 198 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 TMEM160Q9NX00 188 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 C11orf21Q9P2W6 132 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 LENEPQ9Y5L5 61 aa6.73□□□□□ -1.33
TDP1-204ENST00000545686 TEX48A0A1B0GUV7 120 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 CLPSL1A2RUU4 121 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 IGLL5B9A064 214 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 PPIFP30405 207 aaKnown RBP6.72□□□□□ -1.33
TDP1-204ENST00000545686 FOXI2Q6ZQN5 318 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 ATP6V0BQ99437 205 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 MSRB2Q9Y3D2 182 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 ZNF292O60281 2723 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 ATMQ13315 3056 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 TRAV8-2A0A0B4J237 113 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 F8VRH5 84 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.72□□□□□ -1.33
TDP1-204ENST00000545686 H7C1H1 209 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 J3QR89 54 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 ZNF479Q96JC4 524 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 METTL26Q96S19 204 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 SMIM2Q9BVW6 85 aa6.72□□□□□ -1.33
TDP1-204ENST00000545686 LAMA5O15230 3695 aa6.71□□□□□ -1.33
TDP1-204ENST00000545686 A0A1B0GWB2 263 aa6.71□□□□□ -1.33
TDP1-204ENST00000545686 CLEC3BP05452 202 aa6.71□□□□□ -1.33
TDP1-204ENST00000545686 RPL24P83731 157 aaKnown RBP6.71□□□□□ -1.33
TDP1-204ENST00000545686 ORMDL2Q53FV1 153 aa6.71□□□□□ -1.33
TDP1-204ENST00000545686 C11orf71Q6IPW1 123 aa6.71□□□□□ -1.33
TDP1-204ENST00000545686 C8orf86Q6ZUL3 223 aa6.71□□□□□ -1.33
TDP1-204ENST00000545686 EEF1AKMT3Q96AZ1 226 aa6.71□□□□□ -1.33
TDP1-204ENST00000545686 UFC1Q9Y3C8 167 aa6.71□□□□□ -1.33
TDP1-204ENST00000545686 U3KQE9 123 aa6.71□□□□□ -1.33
TDP1-204ENST00000545686 DCHS1Q96JQ0 3298 aa6.71□□□□□ -1.34
TDP1-204ENST00000545686 TRBV7-3A0A075B6L6 115 aa6.71□□□□□ -1.34
TDP1-204ENST00000545686 TRBV7-1A0A0A6YYK4 115 aa6.71□□□□□ -1.34
TDP1-204ENST00000545686 C12orf74Q32Q52 190 aa6.71□□□□□ -1.34
TDP1-204ENST00000545686 SPANXN1Q5VSR9 72 aa6.71□□□□□ -1.34
TDP1-204ENST00000545686 CCDC140Q96MF4 163 aa6.71□□□□□ -1.34
TDP1-204ENST00000545686 SELENOKQ9Y6D0 94 aa6.71□□□□□ -1.34
TDP1-204ENST00000545686 IGHV3OR16-8A0A075B7F1 116 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 IGHV3-35A0A0C4DH35 117 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 FAM90A27PA6NNH2 459 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 ATP6V0E1O15342 81 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 ECSCRQ19T08 205 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 SAMD13Q5VXD3 122 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 MAPKAPK5-AS1Q8N8E1 139 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 C20orf78Q9BR46 151 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 SIRPDQ9H106 197 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 SPANXB1Q9NS25 103 aaPredicted RBP6.7□□□□□ -1.34
TDP1-204ENST00000545686 WNK2Q9Y3S1 2297 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 CENPVL3A0A0U1RRI6 287 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 LY6HO94772 140 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 RRN3P1Q2M238 152 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 C9orf139Q6ZV77 190 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 TOMM6Q96B49 74 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
TDP1-204ENST00000545686 DCHS2Q6V1P9 2916 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 ABCA4P78363 2273 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 TRAV26-2A0A0B4J265 109 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 MYMXA0A1B0GTQ4 84 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 OR11H12B2RN74 326 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 M0R381 172 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 OR11H1Q8NG94 326 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 OR11H2Q8NH07 326 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 GRNP28799 593 aaKnown RBP6.69□□□□□ -1.34
TDP1-204ENST00000545686 UBE2E1P51965 193 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 EFNA4P52798 201 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 CD300EQ496F6 205 aaPredicted RBP6.69□□□□□ -1.34
TDP1-204ENST00000545686 CLEC19AQ6UXS0 136 aa6.69□□□□□ -1.34
TDP1-204ENST00000545686 CHTOPQ9Y3Y2 248 aaKnown RBP6.69□□□□□ -1.34
TDP1-204ENST00000545686 H3BVH4 76 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 SUMO2P61956 95 aaKnown RBP6.68□□□□□ -1.34
TDP1-204ENST00000545686 NEXN-AS1Q8NBZ9 246 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 ITLN2Q8WWU7 325 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms