RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 NTN5Q8WTR8 489 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-216ENST00000545663 TMEM37Q8WXS4 190 aa10.32□□□□□ -0.76
CLSTN3-216ENST00000545663 RSG1Q9BU20 258 aa10.32□□□□□ -0.76
CLSTN3-216ENST00000545663 ZNF471Q9BX82 626 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-216ENST00000545663 A0A1W2PPV4 95 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 GAGE12BA1L429 117 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 GAGE7O76087 117 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 GAGE12FP0CL80 117 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 GAGE12GP0CL81 117 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 GAGE12IP0CL82 117 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 GUK1Q16774 197 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 PATE2Q6UY27 113 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 SLC51BQ86UW2 128 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 OR10J6PQ8NGY7 276 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 SLC25A22Q9H936 323 aa10.31□□□□□ -0.76
CLSTN3-216ENST00000545663 UMAD1C9J7I0 102 aa10.3□□□□□ -0.76
CLSTN3-216ENST00000545663 SEC11BP0C7V7 166 aa10.3□□□□□ -0.76
CLSTN3-216ENST00000545663 CNN1P51911 297 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-216ENST00000545663 HNRNPA3P51991 378 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-216ENST00000545663 LGALSLQ3ZCW2 172 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-216ENST00000545663 AKR1C8PQ5T2L2 129 aa10.3□□□□□ -0.76
CLSTN3-216ENST00000545663 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
CLSTN3-216ENST00000545663 STOML3Q8TAV4 291 aa10.3□□□□□ -0.76
CLSTN3-216ENST00000545663 CYTL1Q9NRR1 136 aa10.3□□□□□ -0.76
CLSTN3-216ENST00000545663 FUT9Q9Y231 359 aa10.3□□□□□ -0.76
CLSTN3-216ENST00000545663 SCXQ7RTU7 201 aa10.29□□□□□ -0.76
CLSTN3-216ENST00000545663 Q8N814 137 aa10.29□□□□□ -0.76
CLSTN3-216ENST00000545663 C16orf74Q96GX8 76 aa10.29□□□□□ -0.76
CLSTN3-216ENST00000545663 SLC25A32Q9H2D1 315 aa10.29□□□□□ -0.76
CLSTN3-216ENST00000545663 TMPRSS5Q9H3S3 457 aa10.29□□□□□ -0.76
CLSTN3-216ENST00000545663 RPRMQ9NS64 109 aa10.29□□□□□ -0.76
CLSTN3-216ENST00000545663 TMEM14CQ9P0S9 112 aa10.29□□□□□ -0.76
CLSTN3-216ENST00000545663 FAT4Q6V0I7 4981 aa10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 A0A087X0K7 114 aa10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 ISLRO14498 428 aa10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 GAS8-AS1O95177 125 aa10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 TAS2R60P59551 318 aa10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 KHDC3LQ587J8 217 aa10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 PQLC2Q6ZP29 291 aa10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 OR10G4Q8NGN3 311 aa10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 OR10G9Q8NGN4 311 aa10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 OR10G7Q8NGN6 311 aa10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 RNASE8Q8TDE3 154 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 ACTR3CQ9C0K3 210 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-216ENST00000545663 RAB5CP51148 216 aa10.27□□□□□ -0.77
CLSTN3-216ENST00000545663 PDE6HQ13956 83 aa10.27□□□□□ -0.77
CLSTN3-216ENST00000545663 LCN15Q6UWW0 184 aa10.27□□□□□ -0.77
CLSTN3-216ENST00000545663 DPPA3Q6W0C5 159 aa10.27□□□□□ -0.77
CLSTN3-216ENST00000545663 C9orf62Q8N4C0 152 aa10.27□□□□□ -0.77
CLSTN3-216ENST00000545663 LRRC20Q8TCA0 184 aa10.27□□□□□ -0.77
CLSTN3-216ENST00000545663 SLC50A1Q9BRV3 221 aa10.27□□□□□ -0.77
CLSTN3-216ENST00000545663 TRAV9-2A0A087WT02 112 aa10.26□□□□□ -0.77
CLSTN3-216ENST00000545663 ZNF253O75346 499 aa10.26□□□□□ -0.77
CLSTN3-216ENST00000545663 HIST1H1EP10412 219 aaKnown RBP10.26□□□□□ -0.77
CLSTN3-216ENST00000545663 CDC34P49427 236 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-216ENST00000545663 IGFL4Q6B9Z1 124 aa10.26□□□□□ -0.77
CLSTN3-216ENST00000545663 PHYHIPLQ96FC7 376 aa10.26□□□□□ -0.77
CLSTN3-216ENST00000545663 LY96Q9Y6Y9 160 aa10.26□□□□□ -0.77
CLSTN3-216ENST00000545663 CD300CQ08708 224 aa10.25□□□□□ -0.77
CLSTN3-216ENST00000545663 GCSAMLQ5JQS6 135 aa10.25□□□□□ -0.77
CLSTN3-216ENST00000545663 C16orf92Q96LL3 132 aa10.25□□□□□ -0.77
CLSTN3-216ENST00000545663 SH3BGRL3Q9H299 93 aa10.25□□□□□ -0.77
CLSTN3-216ENST00000545663 OR51M1Q9H341 326 aa10.25□□□□□ -0.77
CLSTN3-216ENST00000545663 CTXND1A0A1B0GTU2 59 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 PSCAO43653 123 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 OR7C2O60412 319 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 IGLC2P0DOY2 106 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 RAB2AP61019 212 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 LINC01620Q4KN68 170 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 FAM122CQ6P4D5 195 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 LYPD5Q6UWN5 251 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 MIR17HGQ75NE6 70 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 WFDC10BQ8IUB3 73 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 TMEM263Q8WUH6 116 aaKnown RBP10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 PAXXQ9BUH6 204 aa10.24□□□□□ -0.77
CLSTN3-216ENST00000545663 TEX46H3BTG2 121 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 MRPS12O15235 138 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 CXorf1O96002 111 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 KIR3DS1Q14943 382 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 ZNF493Q6ZR52 646 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 RAB24Q969Q5 203 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 DAZAP1Q96EP5 407 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 FAM167A-AS1Q96KT0 104 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 LINC00467Q9BRT7 94 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 SLC25A2Q9BXI2 301 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 TMEM167BQ9NRX6 74 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 PRELID1Q9Y255 219 aa10.23□□□□□ -0.77
CLSTN3-216ENST00000545663 BOLA2-SMG1P6H3BVE0 249 aa10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 RS1O15537 224 aa10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 DUSP14O95147 198 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 NBEAP1P0C6P0 100 aa10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 STAG3L2P0CL84 134 aa10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 STAG3L3P0CL85 134 aa10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 UBE2L3P68036 154 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 MORN5Q5VZ52 161 aa10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 Q6ZTI0 123 aa10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 TMEM256Q8N2U0 113 aa10.22□□□□□ -0.77
CLSTN3-216ENST00000545663 RNF182Q8N6D2 247 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms