RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PFDN5Q99471 154 aa9.68□□□□□ -0.86
RTN3-214ENST00000545432 Q9HAA7 133 aa9.68□□□□□ -0.86
RTN3-214ENST00000545432 WDR83OSQ9Y284 106 aa9.68□□□□□ -0.86
RTN3-214ENST00000545432 VWC2Q2TAL6 325 aa9.67□□□□□ -0.86
RTN3-214ENST00000545432 Q6AWC8 147 aa9.67□□□□□ -0.86
RTN3-214ENST00000545432 NRARPQ7Z6K4 114 aa9.67□□□□□ -0.86
RTN3-214ENST00000545432 EXOC3-AS1Q8N2X6 119 aa9.67□□□□□ -0.86
RTN3-214ENST00000545432 TOMM5Q8N4H5 51 aa9.67□□□□□ -0.86
RTN3-214ENST00000545432 CIRBP-AS1Q8TBR5 109 aa9.67□□□□□ -0.86
RTN3-214ENST00000545432 MRPS26Q9BYN8 205 aaKnown RBP9.67□□□□□ -0.86
RTN3-214ENST00000545432 IGKV2-40A0A087WW87 121 aaPredicted RBP9.66□□□□□ -0.86
RTN3-214ENST00000545432 TRAV8-6A0A0B4J262 113 aa9.66□□□□□ -0.86
RTN3-214ENST00000545432 IGKV2D-40P01614 121 aaPredicted RBP9.66□□□□□ -0.86
RTN3-214ENST00000545432 IGLV2-8P01709 118 aa9.66□□□□□ -0.86
RTN3-214ENST00000545432 PFN1P07737 140 aaKnown RBP9.66□□□□□ -0.86
RTN3-214ENST00000545432 MT1HL1P0DM35 61 aa9.66□□□□□ -0.86
RTN3-214ENST00000545432 ZNF138P52744 262 aa9.66□□□□□ -0.86
RTN3-214ENST00000545432 RAB31Q13636 194 aa9.66□□□□□ -0.86
RTN3-214ENST00000545432 LELP1Q5T871 98 aa9.66□□□□□ -0.86
RTN3-214ENST00000545432 MCFD2Q8NI22 146 aa9.66□□□□□ -0.86
RTN3-214ENST00000545432 SLIRPQ9GZT3 109 aaKnown RBP9.66□□□□□ -0.86
RTN3-214ENST00000545432 TNXBP22105 4242 aa9.65□□□□□ -0.86
RTN3-214ENST00000545432 OR4C5Q8NGB2 326 aa9.65□□□□□ -0.86
RTN3-214ENST00000545432 C11orf1Q9H5F2 150 aa9.65□□□□□ -0.86
RTN3-214ENST00000545432 SLC39A9Q9NUM3 307 aa9.65□□□□□ -0.86
RTN3-214ENST00000545432 TIMM9Q9Y5J7 89 aa9.65□□□□□ -0.86
RTN3-214ENST00000545432 TRGV11A0A075B6L2 103 aa9.64□□□□□ -0.87
RTN3-214ENST00000545432 RBAKDNA6NC62 111 aa9.64□□□□□ -0.87
RTN3-214ENST00000545432 MBPP02686 304 aaPredicted RBP9.64□□□□□ -0.87
RTN3-214ENST00000545432 PYYP10082 97 aa9.64□□□□□ -0.87
RTN3-214ENST00000545432 BCL7BQ9BQE9 202 aa9.64□□□□□ -0.87
RTN3-214ENST00000545432 AAMDCQ9H7C9 122 aa9.64□□□□□ -0.87
RTN3-214ENST00000545432 LENEPQ9Y5L5 61 aa9.64□□□□□ -0.87
RTN3-214ENST00000545432 RNF222A6NCQ9 220 aa9.63□□□□□ -0.87
RTN3-214ENST00000545432 M0R2P5 195 aa9.63□□□□□ -0.87
RTN3-214ENST00000545432 PPT1P50897 306 aa9.63□□□□□ -0.87
RTN3-214ENST00000545432 IAH1Q2TAA2 248 aaPredicted RBP9.63□□□□□ -0.87
RTN3-214ENST00000545432 ACOT6Q3I5F7 207 aaPredicted RBP9.63□□□□□ -0.87
RTN3-214ENST00000545432 MUC21Q5SSG8 566 aa9.63□□□□□ -0.87
RTN3-214ENST00000545432 FAM167A-AS1Q96KT0 104 aa9.63□□□□□ -0.87
RTN3-214ENST00000545432 V9GYH0 126 aa9.63□□□□□ -0.87
RTN3-214ENST00000545432 TRAV8-3A0A0A6YYJ7 113 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 TRBV6-4A0A1B0GX49 114 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 CIDEAO60543 219 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 NOL3O60936 208 aaKnown RBP9.62□□□□□ -0.87
RTN3-214ENST00000545432 IGHV3-30P01768 117 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 IGHV3-30-5P0DP03 117 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 TMEM183BQ1AE95 376 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 LINC01620Q4KN68 170 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 OR10J3Q5JRS4 329 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 TMEM183AQ8IXX5 376 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 NHLRC2Q8NBF2 726 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 DAZAP1Q96EP5 407 aaKnown RBP9.62□□□□□ -0.87
RTN3-214ENST00000545432 C20orf85Q9H1P6 137 aa9.62□□□□□ -0.87
RTN3-214ENST00000545432 IGHV3-16A0A0C4DH30 117 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 RS1O15537 224 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 NDUFB6O95139 128 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 SCGB1D2O95969 90 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 IGLV2-11P01706 119 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 NBEAP1P0C6P0 100 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
RTN3-214ENST00000545432 BAK1Q16611 211 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 FAM122CQ6P4D5 195 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 FAM159AQ6UWV7 190 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 SLC25A29Q8N8R3 303 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 SLC25A2Q9BXI2 301 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 GTSF1LQ9H1H1 148 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 UQCC1Q9NVA1 299 aa9.61□□□□□ -0.87
RTN3-214ENST00000545432 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.6□□□□□ -0.87
RTN3-214ENST00000545432 TMBIM6P55061 237 aa9.6□□□□□ -0.87
RTN3-214ENST00000545432 Q8N976 141 aa9.6□□□□□ -0.87
RTN3-214ENST00000545432 Q8TAT8 98 aa9.6□□□□□ -0.87
RTN3-214ENST00000545432 MITD1Q8WV92 249 aa9.6□□□□□ -0.87
RTN3-214ENST00000545432 COX11Q9Y6N1 276 aa9.6□□□□□ -0.87
RTN3-214ENST00000545432 LECT2O14960 151 aa9.59□□□□□ -0.87
RTN3-214ENST00000545432 GNRH2O43555 120 aa9.59□□□□□ -0.87
RTN3-214ENST00000545432 TMED6Q8WW62 240 aa9.59□□□□□ -0.87
RTN3-214ENST00000545432 BAALCQ8WXS3 180 aa9.59□□□□□ -0.87
RTN3-214ENST00000545432 GSKIPQ9P0R6 139 aa9.59□□□□□ -0.87
RTN3-214ENST00000545432 FLVCR2Q9UPI3 526 aa9.59□□□□□ -0.87
RTN3-214ENST00000545432 RBFOX3A6NFN3 312 aa9.58□□□□□ -0.88
RTN3-214ENST00000545432 S100A11P31949 105 aa9.58□□□□□ -0.88
RTN3-214ENST00000545432 RHOHQ15669 191 aa9.58□□□□□ -0.88
RTN3-214ENST00000545432 PYDC2Q56P42 97 aa9.58□□□□□ -0.88
RTN3-214ENST00000545432 GCSAMLQ5JQS6 135 aa9.58□□□□□ -0.88
RTN3-214ENST00000545432 TOR2AQ5JU69 321 aa9.58□□□□□ -0.88
RTN3-214ENST00000545432 Q8N3U1 123 aa9.58□□□□□ -0.88
RTN3-214ENST00000545432 PRADC1Q9BSG0 188 aa9.58□□□□□ -0.88
RTN3-214ENST00000545432 OR51M1Q9H341 326 aa9.58□□□□□ -0.88
RTN3-214ENST00000545432 GPN1Q9HCN4 374 aaPredicted RBP9.58□□□□□ -0.88
RTN3-214ENST00000545432 FAM24AA6NFZ4 105 aa9.57□□□□□ -0.88
RTN3-214ENST00000545432 FBLL1A6NHQ2 334 aaKnown RBP9.57□□□□□ -0.88
RTN3-214ENST00000545432 CST7O76096 145 aa9.57□□□□□ -0.88
RTN3-214ENST00000545432 ATP6V0E2Q8NHE4 81 aa9.57□□□□□ -0.88
RTN3-214ENST00000545432 FXYD5Q96DB9 178 aa9.57□□□□□ -0.88
RTN3-214ENST00000545432 PAXXQ9BUH6 204 aa9.57□□□□□ -0.88
RTN3-214ENST00000545432 NAP1L6A6NFF2 107 aa9.56□□□□□ -0.88
RTN3-214ENST00000545432 LINC00694P0DN24 101 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms