RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ADCYAP1P18509 176 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 EGFEM1PQ0D2K5 195 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 ERCC8Q13216 396 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 ADIRFQ15847 76 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 OR4B1Q8NGF8 309 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 DAZAP1Q96EP5 407 aaKnown RBP7.05□□□□□ -1.28
YBX3-215ENST00000544504 ASCL2Q99929 193 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 MLST8Q9BVC4 326 aa7.05□□□□□ -1.28
YBX3-215ENST00000544504 RYR1P21817 5038 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 STAB2Q8WWQ8 2551 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 HUWE1Q7Z6Z7 4374 aaKnown RBP7.04□□□□□ -1.28
YBX3-215ENST00000544504 F6UB75 175 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 GCGP01275 180 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 MT-ND4LP03901 98 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 CD7P09564 240 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 RPL23P62829 140 aaKnown RBP7.04□□□□□ -1.28
YBX3-215ENST00000544504 RHEBQ15382 184 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 CASC10Q5T4H9 136 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 MORN3Q6PF18 240 aaPredicted RBP7.04□□□□□ -1.28
YBX3-215ENST00000544504 LINC01551Q86U37 167 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 C15orf54Q8N8G6 183 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 OCC1Q8TAD7 63 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 SGK494Q96LW2 274 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 SORL1Q92673 2214 aa7.04□□□□□ -1.28
YBX3-215ENST00000544504 STARD9Q9P2P6 4700 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 KNCNA6PVL3 124 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 FABP5P3A8MUU1 101 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 GPX1P07203 203 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 ZNF705DP0CH99 300 aaPredicted RBP7.03□□□□□ -1.28
YBX3-215ENST00000544504 ZNF705BP0CI00 300 aaPredicted RBP7.03□□□□□ -1.28
YBX3-215ENST00000544504 CDKN1BP46527 198 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 KRTAP10-11P60412 298 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 FAM162BQ5T6X4 162 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 CLRN3Q8NCR9 226 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 Q8TAT8 98 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 ANAPC16Q96DE5 110 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 FAM19A4Q96LR4 140 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 C20orf144Q9BQM9 153 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 C1QTNF4Q9BXJ3 329 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 CTDSP1Q9GZU7 261 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 OSTCQ9NRP0 149 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 C19orf73Q9NVV2 129 aa7.03□□□□□ -1.28
YBX3-215ENST00000544504 TRAV21A0A0B4J279 112 aa7.02□□□□□ -1.29
YBX3-215ENST00000544504 LCE6AA0A183 80 aa7.02□□□□□ -1.29
YBX3-215ENST00000544504 XKRY2A2RUG3 117 aa7.02□□□□□ -1.29
YBX3-215ENST00000544504 IGLV2-8P01709 118 aa7.02□□□□□ -1.29
YBX3-215ENST00000544504 IBA57Q5T440 356 aaKnown RBP7.02□□□□□ -1.29
YBX3-215ENST00000544504 GDF5OSQ5U4N7 250 aa7.02□□□□□ -1.29
YBX3-215ENST00000544504 FAM231DQ6ZW35 169 aa7.02□□□□□ -1.29
YBX3-215ENST00000544504 TRPT1Q86TN4 253 aaKnown RBP7.02□□□□□ -1.29
YBX3-215ENST00000544504 ISOC2Q96AB3 205 aa7.02□□□□□ -1.29
YBX3-215ENST00000544504 ZC2HC1AQ96GY0 325 aa7.02□□□□□ -1.29
YBX3-215ENST00000544504 A0A087WWC5 75 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 C7orf71A4D174 169 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 PGPEP1LA6NFU8 196 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 KLLNB2CW77 178 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 IGKV3-20P01619 116 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 P01737 135 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 PFN1P07737 140 aaKnown RBP7.01□□□□□ -1.29
YBX3-215ENST00000544504 DEFB1P60022 68 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 ERVFC1-1P60608 527 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 RPS20P60866 119 aaKnown RBP7.01□□□□□ -1.29
YBX3-215ENST00000544504 CT83Q5H943 113 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 PRR27Q6MZM9 219 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 AMTNQ6UX39 209 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 ZFAND2AQ8N6M9 145 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 NHLRC2Q8NBF2 726 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 OR10G8Q8NGN5 311 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 MUC7Q8TAX7 377 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 SFRP2Q96HF1 295 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 TUBA4BQ9H853 241 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 TMEM242Q9NWH2 141 aa7.01□□□□□ -1.29
YBX3-215ENST00000544504 KIR2DL5BA0A0G2JN68 375 aa7□□□□□ -1.29
YBX3-215ENST00000544504 KIR2DL5BA0A0G2JPC4 375 aa7□□□□□ -1.29
YBX3-215ENST00000544504 C7orf77A4D0Y5 90 aa7□□□□□ -1.29
YBX3-215ENST00000544504 H7BYZ3 331 aa7□□□□□ -1.29
YBX3-215ENST00000544504 K7EN84 100 aa7□□□□□ -1.29
YBX3-215ENST00000544504 GATCO43716 136 aaKnown RBP7□□□□□ -1.29
YBX3-215ENST00000544504 INSP01308 110 aa7□□□□□ -1.29
YBX3-215ENST00000544504 APOC4P55056 127 aa7□□□□□ -1.29
YBX3-215ENST00000544504 OR5I1Q13606 314 aa7□□□□□ -1.29
YBX3-215ENST00000544504 Q6AWC8 147 aa7□□□□□ -1.29
YBX3-215ENST00000544504 KIR2DL5AQ8N109 375 aa7□□□□□ -1.29
YBX3-215ENST00000544504 DEFB125Q8N687 156 aa7□□□□□ -1.29
YBX3-215ENST00000544504 KIR2DL5BQ8NHK3 375 aa7□□□□□ -1.29
YBX3-215ENST00000544504 KCNS1Q96KK3 526 aa7□□□□□ -1.29
YBX3-215ENST00000544504 C8orf49Q96NF6 230 aa7□□□□□ -1.29
YBX3-215ENST00000544504 SRD5A3Q9H8P0 318 aa7□□□□□ -1.29
YBX3-215ENST00000544504 RPS10P5Q9NQ39 176 aa7□□□□□ -1.29
YBX3-215ENST00000544504 PLECQ15149 4684 aaKnown RBP7□□□□□ -1.29
YBX3-215ENST00000544504 LOC102724200A0A096LPH7 203 aaPredicted RBP6.99□□□□□ -1.29
YBX3-215ENST00000544504 C19orf71A6NCJ1 209 aa6.99□□□□□ -1.29
YBX3-215ENST00000544504 CXorf65A6NEN9 183 aa6.99□□□□□ -1.29
YBX3-215ENST00000544504 ZNF705GA8MUZ8 300 aaPredicted RBP6.99□□□□□ -1.29
YBX3-215ENST00000544504 A8MWL6 223 aa6.99□□□□□ -1.29
YBX3-215ENST00000544504 SH2D1AO60880 128 aa6.99□□□□□ -1.29
YBX3-215ENST00000544504 PRB4P10163 310 aaPredicted RBP6.99□□□□□ -1.29
YBX3-215ENST00000544504 RNASE4P34096 147 aaKnown RBP6.99□□□□□ -1.29
YBX3-215ENST00000544504 RPL19P84098 196 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms