RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 Q6ZTC4 211 aa13.63□□□□□ -0.23
DDX55-211ENST00000544429 SFT2D1Q8WV19 159 aa13.63□□□□□ -0.23
DDX55-211ENST00000544429 ATG101Q9BSB4 218 aa13.63□□□□□ -0.23
DDX55-211ENST00000544429 RPH3ALQ9UNE2 315 aa13.63□□□□□ -0.23
DDX55-211ENST00000544429 TRAV1-1A0A0B4J248 108 aa13.62□□□□□ -0.23
DDX55-211ENST00000544429 UBE2G2P60604 165 aa13.62□□□□□ -0.23
DDX55-211ENST00000544429 Q6AWC8 147 aa13.62□□□□□ -0.23
DDX55-211ENST00000544429 CYB561D1Q8N8Q1 229 aa13.62□□□□□ -0.23
DDX55-211ENST00000544429 PLECQ15149 4684 aaKnown RBP13.62□□□□□ -0.23
DDX55-211ENST00000544429 LYSTQ99698 3801 aa13.62□□□□□ -0.23
DDX55-211ENST00000544429 LYRM9A8MSI8 78 aa13.61□□□□□ -0.23
DDX55-211ENST00000544429 C11orf94C9JXX5 98 aa13.61□□□□□ -0.23
DDX55-211ENST00000544429 H2AFB1P0C5Y9 115 aa13.61□□□□□ -0.23
DDX55-211ENST00000544429 TMEM75Q8N9X5 138 aa13.61□□□□□ -0.23
DDX55-211ENST00000544429 FBLL1A6NHQ2 334 aaKnown RBP13.6□□□□□ -0.23
DDX55-211ENST00000544429 HTN1P15515 57 aa13.6□□□□□ -0.23
DDX55-211ENST00000544429 ANXA2RQ3ZCQ2 193 aa13.6□□□□□ -0.23
DDX55-211ENST00000544429 ZNF767PQ75MW2 155 aa13.6□□□□□ -0.23
DDX55-211ENST00000544429 C11orf72Q8NBR9 251 aa13.6□□□□□ -0.23
DDX55-211ENST00000544429 TCEAL7Q9BRU2 100 aa13.6□□□□□ -0.23
DDX55-211ENST00000544429 SACSQ9NZJ4 4579 aa13.59□□□□□ -0.23
DDX55-211ENST00000544429 HIST1H2BAQ96A08 127 aa13.59□□□□□ -0.23
DDX55-211ENST00000544429 PSG8Q9UQ74 426 aa13.59□□□□□ -0.23
DDX55-211ENST00000544429 DNAH1Q9P2D7 4330 aa13.59□□□□□ -0.23
DDX55-211ENST00000544429 TRAV10A0A0B4J240 114 aa13.58□□□□□ -0.24
DDX55-211ENST00000544429 K7EQM0 130 aa13.58□□□□□ -0.24
DDX55-211ENST00000544429 PEX7O00628 323 aa13.58□□□□□ -0.24
DDX55-211ENST00000544429 NKX2-5P52952 324 aaPredicted RBP13.58□□□□□ -0.24
DDX55-211ENST00000544429 FLI1Q01543 452 aaPredicted RBP13.58□□□□□ -0.24
DDX55-211ENST00000544429 EIF4E3Q8N5X7 224 aaKnown RBP13.58□□□□□ -0.24
DDX55-211ENST00000544429 LINC00612Q8N6U2 182 aa13.58□□□□□ -0.24
DDX55-211ENST00000544429 SGK494Q96LW2 274 aa13.58□□□□□ -0.24
DDX55-211ENST00000544429 LINC00479Q96M42 142 aa13.58□□□□□ -0.24
DDX55-211ENST00000544429 TREM1Q9NP99 234 aa13.58□□□□□ -0.24
DDX55-211ENST00000544429 KLK5Q9Y337 293 aaPredicted RBP13.58□□□□□ -0.24
DDX55-211ENST00000544429 KLF12Q9Y4X4 402 aa13.58□□□□□ -0.24
DDX55-211ENST00000544429 TIMM8BQ9Y5J9 83 aaPredicted RBP13.58□□□□□ -0.24
DDX55-211ENST00000544429 PAGE4O60829 102 aa13.57□□□□□ -0.24
DDX55-211ENST00000544429 ATP5G3P48201 142 aa13.57□□□□□ -0.24
DDX55-211ENST00000544429 TDRG1Q3Y452 100 aa13.57□□□□□ -0.24
DDX55-211ENST00000544429 IGHV1OR15-1A0A075B7D0 117 aa13.56□□□□□ -0.24
DDX55-211ENST00000544429 IFNA7P01567 189 aa13.56□□□□□ -0.24
DDX55-211ENST00000544429 PPT1P50897 306 aa13.56□□□□□ -0.24
DDX55-211ENST00000544429 CCL20P78556 96 aa13.56□□□□□ -0.24
DDX55-211ENST00000544429 DAZ2Q13117 558 aaKnown RBP13.56□□□□□ -0.24
DDX55-211ENST00000544429 IBA57Q5T440 356 aaKnown RBP13.56□□□□□ -0.24
DDX55-211ENST00000544429 ZNF680Q8NEM1 530 aa13.56□□□□□ -0.24
DDX55-211ENST00000544429 LCE6AA0A183 80 aa13.55□□□□□ -0.24
DDX55-211ENST00000544429 A0A1B0GV50 99 aa13.55□□□□□ -0.24
DDX55-211ENST00000544429 C2CD4CQ8TF44 421 aa13.55□□□□□ -0.24
DDX55-211ENST00000544429 NOP10Q9NPE3 64 aaKnown RBP13.55□□□□□ -0.24
DDX55-211ENST00000544429 TP53TG3Q9ULZ0 132 aa13.55□□□□□ -0.24
DDX55-211ENST00000544429 BOLA1Q9Y3E2 137 aa13.55□□□□□ -0.24
DDX55-211ENST00000544429 ALMS1Q8TCU4 4167 aa13.55□□□□□ -0.24
DDX55-211ENST00000544429 DEFB131BA0A096LNP1 70 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 TRAV34A0A0B4J273 112 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 TRBV6-1A0A0K0K1D8 114 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 F6UZH7 168 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 ZNF80P51504 273 aaPredicted RBP13.54□□□□□ -0.24
DDX55-211ENST00000544429 TCL1AP56279 114 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 DAD1P61803 113 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 CST9LP1Q5W188 147 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 COX8CQ7Z4L0 72 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 PRNTQ86SH4 94 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 C8orf49Q96NF6 230 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 NDFIP1Q9BT67 221 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 GSN-AS1Q9NRJ2 163 aa13.54□□□□□ -0.24
DDX55-211ENST00000544429 TRAV21A0A0B4J279 112 aa13.53□□□□□ -0.24
DDX55-211ENST00000544429 CBY3A6NI87 242 aa13.53□□□□□ -0.24
DDX55-211ENST00000544429 RGS13O14921 159 aa13.53□□□□□ -0.24
DDX55-211ENST00000544429 TCTAP57738 103 aa13.53□□□□□ -0.24
DDX55-211ENST00000544429 SAPCD1Q5SSQ6 148 aa13.53□□□□□ -0.24
DDX55-211ENST00000544429 Q86TA4 180 aa13.53□□□□□ -0.24
DDX55-211ENST00000544429 ALKAL2Q6UX46 152 aa13.52□□□□□ -0.25
DDX55-211ENST00000544429 FMC1Q96HJ9 113 aa13.52□□□□□ -0.25
DDX55-211ENST00000544429 MANBALQ9NQG1 85 aa13.52□□□□□ -0.25
DDX55-211ENST00000544429 APLNQ9ULZ1 77 aa13.52□□□□□ -0.25
DDX55-211ENST00000544429 SNURFLB1AK76 121 aa13.51□□□□□ -0.25
DDX55-211ENST00000544429 TMEM183BQ1AE95 376 aa13.51□□□□□ -0.25
DDX55-211ENST00000544429 MUC21Q5SSG8 566 aa13.51□□□□□ -0.25
DDX55-211ENST00000544429 C18orf15Q96N68 181 aa13.51□□□□□ -0.25
DDX55-211ENST00000544429 C11orf21Q9P2W6 132 aa13.51□□□□□ -0.25
DDX55-211ENST00000544429 TEX46H3BTG2 121 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 GCGP01275 180 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 LTAP01374 205 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 PFN1P07737 140 aaKnown RBP13.5□□□□□ -0.25
DDX55-211ENST00000544429 DEFB130BP0DP73 79 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 DEFB130AP0DP74 79 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 SMUG1Q53HV7 270 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 FAM159AQ6UWV7 190 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 LYPD6BQ8NI32 183 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 FAM210BQ96KR6 192 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 GNG13Q9P2W3 67 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 ZFP30Q9Y2G7 519 aa13.5□□□□□ -0.25
DDX55-211ENST00000544429 IGHV4-4A0A075B6R2 117 aa13.49□□□□□ -0.25
DDX55-211ENST00000544429 SCO2A0A1W2PP80 73 aa13.49□□□□□ -0.25
DDX55-211ENST00000544429 IGLL5B9A064 214 aa13.49□□□□□ -0.25
DDX55-211ENST00000544429 SPINK4O60575 86 aa13.49□□□□□ -0.25
DDX55-211ENST00000544429 Q6ZTI0 123 aa13.49□□□□□ -0.25
DDX55-211ENST00000544429 C11orf52Q96A22 123 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms