RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 PLAC8L1A1L4L8 177 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 RBAKDNA6NC62 111 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 MAP1LC3B2A6NCE7 125 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 K7EQM0 130 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 BCL2L11O43521 198 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 ZNF324O75467 553 aaPredicted RBP7.84□□□□□ -1.15
DDB1-222ENST00000543627 CRISP2P16562 243 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 FHITP49789 147 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 ZNF345Q14585 488 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 TMEM88Q6PEY1 159 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 PRNTQ86SH4 94 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 STOML3Q8TAV4 291 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 FAM213BQ8TBF2 198 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 MAP1LC3BQ9GZQ8 125 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 TREM1Q9NP99 234 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 LYSTQ99698 3801 aa7.84□□□□□ -1.15
DDB1-222ENST00000543627 TRGV1A0A0A0MS02 117 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 NUDT3O95989 172 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 ATP5G1P05496 136 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 NMBP08949 121 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 ATP5G3P48201 142 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 TCTAP57738 103 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 EIF5AP63241 154 aaKnown RBP7.83□□□□□ -1.16
DDB1-222ENST00000543627 CST9LP1Q5W188 147 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 LGALS9CQ6DKI2 356 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 FAM159AQ6UWV7 190 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 Q6ZNX1 250 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 UBE2DNLQ8IWF7 75 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 C5orf17Q8NAS9 161 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 NDFIP1Q9BT67 221 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 EPDR1Q9UM22 224 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 KLF12Q9Y4X4 402 aa7.83□□□□□ -1.16
DDB1-222ENST00000543627 TRGV2A0A075B6R0 118 aa7.82□□□□□ -1.16
DDB1-222ENST00000543627 TRAV34A0A0B4J273 112 aa7.82□□□□□ -1.16
DDB1-222ENST00000543627 TCRAP04437 139 aa7.82□□□□□ -1.16
DDB1-222ENST00000543627 Q6ZTI0 123 aa7.82□□□□□ -1.16
DDB1-222ENST00000543627 ZNF680Q8NEM1 530 aa7.82□□□□□ -1.16
DDB1-222ENST00000543627 SFT2D1Q8WV19 159 aa7.82□□□□□ -1.16
DDB1-222ENST00000543627 TMED6Q8WW62 240 aa7.82□□□□□ -1.16
DDB1-222ENST00000543627 PSG8Q9UQ74 426 aa7.82□□□□□ -1.16
DDB1-222ENST00000543627 A0A0J9YY99 117 aa7.81□□□□□ -1.16
DDB1-222ENST00000543627 GGTLC3B5MD39 225 aa7.81□□□□□ -1.16
DDB1-222ENST00000543627 IGHV3-53P01767 116 aa7.81□□□□□ -1.16
DDB1-222ENST00000543627 SEC11BP0C7V7 166 aa7.81□□□□□ -1.16
DDB1-222ENST00000543627 TPT1P13693 172 aaKnown RBP7.81□□□□□ -1.16
DDB1-222ENST00000543627 TMEM183BQ1AE95 376 aa7.81□□□□□ -1.16
DDB1-222ENST00000543627 AKAP14Q86UN6 197 aa7.81□□□□□ -1.16
DDB1-222ENST00000543627 TMEM183AQ8IXX5 376 aa7.81□□□□□ -1.16
DDB1-222ENST00000543627 TVP23CQ96ET8 276 aa7.81□□□□□ -1.16
DDB1-222ENST00000543627 LINC00479Q96M42 142 aa7.81□□□□□ -1.16
DDB1-222ENST00000543627 C8orf49Q96NF6 230 aa7.81□□□□□ -1.16
DDB1-222ENST00000543627 MRPL16Q9NX20 251 aaKnown RBP7.81□□□□□ -1.16
DDB1-222ENST00000543627 RYR2Q92736 4967 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 TRAV21A0A0B4J279 112 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 A0A1W2PRE2 83 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 GNRH2O43555 120 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 FLI1Q01543 452 aaPredicted RBP7.8□□□□□ -1.16
DDB1-222ENST00000543627 ZNF415Q09FC8 603 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 ANXA2RQ3ZCQ2 193 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 LGALSLQ3ZCW2 172 aaPredicted RBP7.8□□□□□ -1.16
DDB1-222ENST00000543627 ZFP69Q49AA0 526 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 TCTE3Q8IZS6 198 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 CYB561D1Q8N8Q1 229 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 SUN5Q8TC36 379 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 ATG101Q9BSB4 218 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 LENEPQ9Y5L5 61 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 ALMS1Q8TCU4 4167 aa7.8□□□□□ -1.16
DDB1-222ENST00000543627 HYDINQ4G0P3 5121 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 TRBV7-9A0A0J9YWB2 115 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 SERTM2A0A1B0GWG4 89 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 FAM74A7A6NL05 159 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 UMAD1C9J7I0 102 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 M0R2N4 97 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 PEX7O00628 323 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 PAGE4O60829 102 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 GCGP01275 180 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 H2AFB1P0C5Y9 115 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 P0DMU3 169 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 FAM231AP0DMU4 169 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 FAM231CP0DMU5 169 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 PPT1P50897 306 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 ARL6IP6Q8N6S5 226 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 C11orf72Q8NBR9 251 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 MDFICQ9P1T7 246 aa7.79□□□□□ -1.16
DDB1-222ENST00000543627 TRGV11A0A075B6L2 103 aa7.78□□□□□ -1.16
DDB1-222ENST00000543627 TRAV26-1A0A087WT03 109 aa7.78□□□□□ -1.16
DDB1-222ENST00000543627 C1QBP02746 253 aa7.78□□□□□ -1.16
DDB1-222ENST00000543627 TCL1AP56279 114 aa7.78□□□□□ -1.16
DDB1-222ENST00000543627 UBE2G1P62253 170 aa7.78□□□□□ -1.16
DDB1-222ENST00000543627 DAZ2Q13117 558 aaKnown RBP7.78□□□□□ -1.16
DDB1-222ENST00000543627 SMUG1Q53HV7 270 aa7.78□□□□□ -1.16
DDB1-222ENST00000543627 Q6AWC8 147 aa7.78□□□□□ -1.16
DDB1-222ENST00000543627 FAM210BQ96KR6 192 aa7.78□□□□□ -1.16
DDB1-222ENST00000543627 LINC00467Q9BRT7 94 aa7.78□□□□□ -1.16
DDB1-222ENST00000543627 DNAH1Q9P2D7 4330 aa7.77□□□□□ -1.17
DDB1-222ENST00000543627 IGLV2-18A0A075B6J9 118 aa7.77□□□□□ -1.17
DDB1-222ENST00000543627 A0A1B0GVG6 124 aa7.77□□□□□ -1.17
DDB1-222ENST00000543627 HOXA5P20719 270 aa7.77□□□□□ -1.17
DDB1-222ENST00000543627 ZNF80P51504 273 aaPredicted RBP7.77□□□□□ -1.17
DDB1-222ENST00000543627 SAPCD1Q5SSQ6 148 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms