RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 IBA57Q5T440 356 aaKnown RBP10.52□□□□□ -0.73
RTN3-211ENST00000542238 LYPD5Q6UWN5 251 aa10.52□□□□□ -0.73
RTN3-211ENST00000542238 TIMM9Q9Y5J7 89 aa10.52□□□□□ -0.73
RTN3-211ENST00000542238 LY96Q9Y6Y9 160 aa10.52□□□□□ -0.73
RTN3-211ENST00000542238 A0A087WTM6 91 aa10.51□□□□□ -0.73
RTN3-211ENST00000542238 CAV2P51636 162 aa10.51□□□□□ -0.73
RTN3-211ENST00000542238 NEGR1Q7Z3B1 354 aa10.51□□□□□ -0.73
RTN3-211ENST00000542238 AGPAT4-IT1Q9H0P7 198 aa10.51□□□□□ -0.73
RTN3-211ENST00000542238 UQCC1Q9NVA1 299 aa10.51□□□□□ -0.73
RTN3-211ENST00000542238 HHLA3Q9XRX5 114 aa10.51□□□□□ -0.73
RTN3-211ENST00000542238 KRBOX1C9JBD0 128 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 K7EP13 123 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 DNAH10OSP0CZ25 163 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 CRYBA4P53673 196 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 H2BFSP57053 126 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 KRTAP10-1P60331 282 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 ICAM4Q14773 271 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 SLC51BQ86UW2 128 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 FAM19A4Q96LR4 140 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 C8orf49Q96NF6 230 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 VGLL1Q99990 258 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 ARPC5LQ9BPX5 153 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 AAMDCQ9H7C9 122 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 SLC39A9Q9NUM3 307 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 MRPL16Q9NX20 251 aaKnown RBP10.5□□□□□ -0.73
RTN3-211ENST00000542238 MSRB1Q9NZV6 116 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 TMEM14CQ9P0S9 112 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 WDR83OSQ9Y284 106 aa10.5□□□□□ -0.73
RTN3-211ENST00000542238 LSM5Q9Y4Y9 91 aaKnown RBP10.5□□□□□ -0.73
RTN3-211ENST00000542238 FXYD6-FXYD2A0A087WZ82 144 aa10.49□□□□□ -0.73
RTN3-211ENST00000542238 C5orf51A6NDU8 294 aa10.49□□□□□ -0.73
RTN3-211ENST00000542238 ARPC5O15511 151 aa10.49□□□□□ -0.73
RTN3-211ENST00000542238 CST7O76096 145 aa10.49□□□□□ -0.73
RTN3-211ENST00000542238 HIST1H1EP10412 219 aaKnown RBP10.49□□□□□ -0.73
RTN3-211ENST00000542238 CRISP2P16562 243 aa10.49□□□□□ -0.73
RTN3-211ENST00000542238 EVI2AP22794 236 aa10.49□□□□□ -0.73
RTN3-211ENST00000542238 RPL29P47914 159 aaKnown RBP10.49□□□□□ -0.73
RTN3-211ENST00000542238 PDE6HQ13956 83 aa10.49□□□□□ -0.73
RTN3-211ENST00000542238 SMUG1Q53HV7 270 aa10.49□□□□□ -0.73
RTN3-211ENST00000542238 TMEM78Q5T7P6 136 aa10.49□□□□□ -0.73
RTN3-211ENST00000542238 PCNPQ8WW12 178 aaKnown RBP10.49□□□□□ -0.73
RTN3-211ENST00000542238 SRRM2Q9UQ35 2752 aaKnown RBP10.48□□□□□ -0.73
RTN3-211ENST00000542238 IGHV1OR15-1A0A075B7D0 117 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 TRGV4A0A0C4DH28 118 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 A0A0D9SG52 128 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 SCO1O75880 301 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 NDUFB4O95168 129 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 SIX6O95475 246 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 GCSHP23434 173 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 BAXQ07812 192 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 FHL2Q14192 279 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 C9orf47Q6ZRZ4 202 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 EXOC3-AS1Q8N2X6 119 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 BLNKQ8WV28 456 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 TP53TG3Q9ULZ0 132 aa10.48□□□□□ -0.73
RTN3-211ENST00000542238 FLG2Q5D862 2391 aaPredicted RBP10.47□□□□□ -0.73
RTN3-211ENST00000542238 UBE2L5PA0A1B0GUS4 154 aa10.47□□□□□ -0.73
RTN3-211ENST00000542238 FAM25EA8MYX2 175 aa10.47□□□□□ -0.73
RTN3-211ENST00000542238 FAM229AH3BQW9 127 aa10.47□□□□□ -0.73
RTN3-211ENST00000542238 CCSO14618 274 aa10.47□□□□□ -0.73
RTN3-211ENST00000542238 SMR3BP02814 79 aaPredicted RBP10.47□□□□□ -0.73
RTN3-211ENST00000542238 PET100P0DJ07 73 aa10.47□□□□□ -0.73
RTN3-211ENST00000542238 PVALBP20472 110 aaPredicted RBP10.47□□□□□ -0.73
RTN3-211ENST00000542238 SRIP30626 198 aa10.47□□□□□ -0.73
RTN3-211ENST00000542238 ZNF415Q09FC8 603 aa10.47□□□□□ -0.73
RTN3-211ENST00000542238 ZNF345Q14585 488 aa10.47□□□□□ -0.73
RTN3-211ENST00000542238 VWC2Q2TAL6 325 aa10.47□□□□□ -0.73
RTN3-211ENST00000542238 MRPL32Q9BYC8 188 aaKnown RBP10.47□□□□□ -0.73
RTN3-211ENST00000542238 C11orf1Q9H5F2 150 aa10.47□□□□□ -0.73
RTN3-211ENST00000542238 FAM24AA6NFZ4 105 aa10.46□□□□□ -0.73
RTN3-211ENST00000542238 E5RGE8 158 aa10.46□□□□□ -0.73
RTN3-211ENST00000542238 PYYP10082 97 aa10.46□□□□□ -0.73
RTN3-211ENST00000542238 HBG1P69891 147 aa10.46□□□□□ -0.73
RTN3-211ENST00000542238 HBG2P69892 147 aa10.46□□□□□ -0.73
RTN3-211ENST00000542238 KCNRGQ8N5I3 272 aa10.46□□□□□ -0.73
RTN3-211ENST00000542238 ZFAND2AQ8N6M9 145 aa10.46□□□□□ -0.73
RTN3-211ENST00000542238 IGKV2-40A0A087WW87 121 aaPredicted RBP10.45□□□□□ -0.74
RTN3-211ENST00000542238 IGKV2D-40P01614 121 aaPredicted RBP10.45□□□□□ -0.74
RTN3-211ENST00000542238 SULT1A1P50225 295 aa10.45□□□□□ -0.74
RTN3-211ENST00000542238 PRR9Q5T870 116 aa10.45□□□□□ -0.74
RTN3-211ENST00000542238 FAM122CQ6P4D5 195 aa10.45□□□□□ -0.74
RTN3-211ENST00000542238 ALKAL2Q6UX46 152 aa10.45□□□□□ -0.74
RTN3-211ENST00000542238 STX12Q86Y82 276 aa10.45□□□□□ -0.74
RTN3-211ENST00000542238 WFDC10BQ8IUB3 73 aa10.45□□□□□ -0.74
RTN3-211ENST00000542238 C10orf126Q8N4M7 172 aa10.45□□□□□ -0.74
RTN3-211ENST00000542238 ZNF492Q9P255 531 aa10.45□□□□□ -0.74
RTN3-211ENST00000542238 K7EQD1 137 aa10.44□□□□□ -0.74
RTN3-211ENST00000542238 BCL2L11O43521 198 aa10.44□□□□□ -0.74
RTN3-211ENST00000542238 ORM1P02763 201 aa10.44□□□□□ -0.74
RTN3-211ENST00000542238 FGF7P21781 194 aa10.44□□□□□ -0.74
RTN3-211ENST00000542238 RAB32Q13637 225 aa10.44□□□□□ -0.74
RTN3-211ENST00000542238 IQCF2Q8IXL9 164 aa10.44□□□□□ -0.74
RTN3-211ENST00000542238 PPP1R1CQ8WVI7 109 aa10.44□□□□□ -0.74
RTN3-211ENST00000542238 PHYHIPLQ96FC7 376 aa10.44□□□□□ -0.74
RTN3-211ENST00000542238 LYRM2Q9NU23 88 aaPredicted RBP10.44□□□□□ -0.74
RTN3-211ENST00000542238 MDFICQ9P1T7 246 aa10.44□□□□□ -0.74
RTN3-211ENST00000542238 TRBV7-9A0A0J9YWB2 115 aa10.43□□□□□ -0.74
RTN3-211ENST00000542238 CRYGDP07320 174 aa10.43□□□□□ -0.74
RTN3-211ENST00000542238 GYPEP15421 78 aa10.43□□□□□ -0.74
RTN3-211ENST00000542238 ZNF138P52744 262 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms