RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 TMEM183AQ8IXX5 376 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 TUBA4BQ9H853 241 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 DNAH7Q8WXX0 4024 aa7.69□□□□□ -1.18
VPS33A-204ENST00000540669 AMBPP02760 352 aa7.69□□□□□ -1.18
VPS33A-204ENST00000540669 FAM74A3Q4VXF1 159 aa7.69□□□□□ -1.18
VPS33A-204ENST00000540669 STHQ8IWL8 128 aa7.69□□□□□ -1.18
VPS33A-204ENST00000540669 ZC2HC1AQ96GY0 325 aa7.69□□□□□ -1.18
VPS33A-204ENST00000540669 B9D2Q9BPU9 175 aa7.69□□□□□ -1.18
VPS33A-204ENST00000540669 C20orf144Q9BQM9 153 aa7.69□□□□□ -1.18
VPS33A-204ENST00000540669 ZMAT4Q9H898 229 aa7.69□□□□□ -1.18
VPS33A-204ENST00000540669 RPH3ALQ9UNE2 315 aa7.69□□□□□ -1.18
VPS33A-204ENST00000540669 LOC102724200A0A096LPH7 203 aaPredicted RBP7.68□□□□□ -1.18
VPS33A-204ENST00000540669 TMEM218A2RU14 115 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 K7EN84 100 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 M0R2Z0 102 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 ZNF324O75467 553 aaPredicted RBP7.68□□□□□ -1.18
VPS33A-204ENST00000540669 SFTA3P0C7M3 94 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 FRMD6-AS1P0C7T7 363 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 NHLRC4P0CG21 123 aaPredicted RBP7.68□□□□□ -1.18
VPS33A-204ENST00000540669 LEPP41159 167 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 CDKN1BP46527 198 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 CRIP1P50238 77 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 ZNF80P51504 273 aaPredicted RBP7.68□□□□□ -1.18
VPS33A-204ENST00000540669 SAPCD1Q5SSQ6 148 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 ZNF705AQ6ZN79 300 aaPredicted RBP7.68□□□□□ -1.18
VPS33A-204ENST00000540669 ZNF575Q86XF7 245 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 SGK494Q96LW2 274 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 C8orf49Q96NF6 230 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 LINC00467Q9BRT7 94 aa7.68□□□□□ -1.18
VPS33A-204ENST00000540669 CARHSP1Q9Y2V2 147 aaKnown RBP7.68□□□□□ -1.18
VPS33A-204ENST00000540669 C19orf71A6NCJ1 209 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 TSPOP30536 169 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 UBE2G1P62253 170 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 NDUFA5Q16718 116 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 SPINK13Q1W4C9 94 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 ZNF674Q2M3X9 581 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 TDRG1Q3Y452 100 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 PRNTQ86SH4 94 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 LINC01551Q86U37 167 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 C1orf158Q8N1D5 194 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 OR4B1Q8NGF8 309 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 ASCL2Q99929 193 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 C11orf21Q9P2W6 132 aa7.67□□□□□ -1.18
VPS33A-204ENST00000540669 C7orf71A4D174 169 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 PGPEP1LA6NFU8 196 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 UBE2CO00762 179 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 GCGP01275 180 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 GNG4P50150 75 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 BTN1A1Q13410 526 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 SOHLH1Q5JUK2 328 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 Q6ZQT7 251 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 Q6ZWC4 215 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 BAGE2Q86Y30 109 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 C1QTNF4Q9BXJ3 329 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 SEC11CQ9BY50 192 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 CSTL1Q9H114 145 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 TREM1Q9NP99 234 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 TP53TG1Q9Y2A0 90 aa7.66□□□□□ -1.18
VPS33A-204ENST00000540669 DYNC2H1Q8NCM8 4307 aaKnown RBP7.66□□□□□ -1.18
VPS33A-204ENST00000540669 ZNF727A8MUV8 499 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 INSP01308 110 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 IGKV3-20P01619 116 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 PFN1P07737 140 aaKnown RBP7.65□□□□□ -1.18
VPS33A-204ENST00000540669 RPL35AP18077 110 aaKnown RBP7.65□□□□□ -1.18
VPS33A-204ENST00000540669 APOC4P55056 127 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 NUTF2P61970 127 aaKnown RBP7.65□□□□□ -1.18
VPS33A-204ENST00000540669 RPL23P62829 140 aaKnown RBP7.65□□□□□ -1.18
VPS33A-204ENST00000540669 SMUG1Q53HV7 270 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 FAM231DQ6ZW35 169 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 IL17DQ8TAD2 202 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 OCC1Q8TAD7 63 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 TM2D3Q9BRN9 247 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 NDFIP1Q9BT67 221 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 SDF2L1Q9HCN8 221 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 NAT8Q9UHE5 227 aa7.65□□□□□ -1.18
VPS33A-204ENST00000540669 TRAV12-2A0A075B6T6 113 aa7.64□□□□□ -1.19
VPS33A-204ENST00000540669 CA1P00915 261 aaPredicted RBP7.64□□□□□ -1.19
VPS33A-204ENST00000540669 CXCL1P09341 107 aa7.64□□□□□ -1.19
VPS33A-204ENST00000540669 DNLZQ5SXM8 178 aa7.64□□□□□ -1.19
VPS33A-204ENST00000540669 SLC7A5P1Q8MH63 180 aa7.64□□□□□ -1.19
VPS33A-204ENST00000540669 TMEM256Q8N2U0 113 aa7.64□□□□□ -1.19
VPS33A-204ENST00000540669 NHLRC2Q8NBF2 726 aa7.64□□□□□ -1.19
VPS33A-204ENST00000540669 ISOC2Q96AB3 205 aa7.64□□□□□ -1.19
VPS33A-204ENST00000540669 NEU1Q99519 415 aa7.64□□□□□ -1.19
VPS33A-204ENST00000540669 TP53TG3Q9ULZ0 132 aa7.64□□□□□ -1.19
VPS33A-204ENST00000540669 X6R8D5 127 aa7.64□□□□□ -1.19
VPS33A-204ENST00000540669 PLAC8L1A1L4L8 177 aa7.63□□□□□ -1.19
VPS33A-204ENST00000540669 SH2D1AO60880 128 aa7.63□□□□□ -1.19
VPS33A-204ENST00000540669 PNRC1Q12796 327 aaPredicted RBP7.63□□□□□ -1.19
VPS33A-204ENST00000540669 RNF183Q96D59 192 aa7.63□□□□□ -1.19
VPS33A-204ENST00000540669 XCL2Q9UBD3 114 aa7.63□□□□□ -1.19
VPS33A-204ENST00000540669 TRAV21A0A0B4J279 112 aa7.62□□□□□ -1.19
VPS33A-204ENST00000540669 IGKV3D-20A0A0C4DH25 116 aa7.62□□□□□ -1.19
VPS33A-204ENST00000540669 H7BYZ3 331 aa7.62□□□□□ -1.19
VPS33A-204ENST00000540669 GPX1P07203 203 aa7.62□□□□□ -1.19
VPS33A-204ENST00000540669 FXYD7P58549 80 aa7.62□□□□□ -1.19
VPS33A-204ENST00000540669 TMEM241Q24JQ0 296 aa7.62□□□□□ -1.19
VPS33A-204ENST00000540669 ANXA2RQ3ZCQ2 193 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms