RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ATP5G1P05496 136 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 ATP5G3P48201 142 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 ANXA2RQ3ZCQ2 193 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 FAM74A1Q5RGS3 127 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 Q6ZTI0 123 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 KCNRGQ8N5I3 272 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 SGK494Q96LW2 274 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 TMPRSS5Q9H3S3 457 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 KLF12Q9Y4X4 402 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 IGHV1OR15-1A0A075B7D0 117 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 CXorf1O96002 111 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 DAZ2Q13117 558 aaKnown RBP10.58□□□□□ -0.72
UBE3B-212ENST00000540230 MUC21Q5SSG8 566 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 ST6GAL2Q96JF0 529 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 FAT2Q9NYQ8 4349 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 CTXND1A0A1B0GTU2 59 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 F6UZH7 168 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 RGS13O14921 159 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 P0DMU3 169 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 FAM231AP0DMU4 169 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 FAM231CP0DMU5 169 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 FGF8P55075 233 aaPredicted RBP10.57□□□□□ -0.72
UBE3B-212ENST00000540230 ZNF345Q14585 488 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 Q6AWC8 147 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 ZNF680Q8NEM1 530 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 TMED6Q8WW62 240 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 ARPC5LQ9BPX5 153 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 TMEM167BQ9NRX6 74 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 LENEPQ9Y5L5 61 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
UBE3B-212ENST00000540230 HMSDA8MTL9 139 aa10.56□□□□□ -0.72
UBE3B-212ENST00000540230 TCRAP04437 139 aa10.56□□□□□ -0.72
UBE3B-212ENST00000540230 HOXA5P20719 270 aa10.56□□□□□ -0.72
UBE3B-212ENST00000540230 TCL1AP56279 114 aa10.56□□□□□ -0.72
UBE3B-212ENST00000540230 SUMO1P63165 101 aaKnown RBP10.56□□□□□ -0.72
UBE3B-212ENST00000540230 AKR1C8PQ5T2L2 129 aa10.56□□□□□ -0.72
UBE3B-212ENST00000540230 ARL6IP6Q8N6S5 226 aa10.56□□□□□ -0.72
UBE3B-212ENST00000540230 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
UBE3B-212ENST00000540230 C5orf17Q8NAS9 161 aa10.56□□□□□ -0.72
UBE3B-212ENST00000540230 FHITP49789 147 aa10.55□□□□□ -0.72
UBE3B-212ENST00000540230 IBA57Q5T440 356 aaKnown RBP10.55□□□□□ -0.72
UBE3B-212ENST00000540230 TRGV1A0A0A0MS02 117 aa10.54□□□□□ -0.72
UBE3B-212ENST00000540230 UBE2G2P60604 165 aa10.54□□□□□ -0.72
UBE3B-212ENST00000540230 C15orf53Q8NAA6 179 aa10.54□□□□□ -0.72
UBE3B-212ENST00000540230 MDFICQ9P1T7 246 aa10.54□□□□□ -0.72
UBE3B-212ENST00000540230 SPINK4O60575 86 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 NUDT3O95989 172 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 IGLV2-11P01706 119 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 OR5I1Q13606 314 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 C8orf49Q96NF6 230 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 TREM1Q9NP99 234 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 MRPL16Q9NX20 251 aaKnown RBP10.53□□□□□ -0.72
UBE3B-212ENST00000540230 EPDR1Q9UM22 224 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 DNAH17Q9UFH2 4485 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 A0A1W2PRE2 83 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 MAP1LC3B2A6NCE7 125 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 BCL2L11O43521 198 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 UBE2DNLQ8IWF7 75 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 LINC00479Q96M42 142 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 ZNF471Q9BX82 626 aaPredicted RBP10.53□□□□□ -0.72
UBE3B-212ENST00000540230 MAP1LC3BQ9GZQ8 125 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 NAGKQ9UJ70 344 aa10.53□□□□□ -0.72
UBE3B-212ENST00000540230 MUC4Q99102 2169 aa10.52□□□□□ -0.72
UBE3B-212ENST00000540230 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.73
UBE3B-212ENST00000540230 A0A0D9SG52 128 aa10.52□□□□□ -0.73
UBE3B-212ENST00000540230 A0A0J9YY99 117 aa10.52□□□□□ -0.73
UBE3B-212ENST00000540230 SERTM2A0A1B0GWG4 89 aa10.52□□□□□ -0.73
UBE3B-212ENST00000540230 ZNF80P51504 273 aaPredicted RBP10.52□□□□□ -0.73
UBE3B-212ENST00000540230 ZNF415Q09FC8 603 aa10.52□□□□□ -0.73
UBE3B-212ENST00000540230 TMEM183BQ1AE95 376 aa10.52□□□□□ -0.73
UBE3B-212ENST00000540230 TMEM183AQ8IXX5 376 aa10.52□□□□□ -0.73
UBE3B-212ENST00000540230 PSG8Q9UQ74 426 aa10.52□□□□□ -0.73
UBE3B-212ENST00000540230 HECTD4Q9Y4D8 3996 aa10.52□□□□□ -0.73
UBE3B-212ENST00000540230 TRGV2A0A075B6R0 118 aa10.51□□□□□ -0.73
UBE3B-212ENST00000540230 TRAV34A0A0B4J273 112 aa10.51□□□□□ -0.73
UBE3B-212ENST00000540230 KANTRA0A1W2PQU2 76 aa10.51□□□□□ -0.73
UBE3B-212ENST00000540230 FAM74A7A6NL05 159 aa10.51□□□□□ -0.73
UBE3B-212ENST00000540230 FAM159AQ6UWV7 190 aa10.51□□□□□ -0.73
UBE3B-212ENST00000540230 Q6ZNX1 250 aa10.51□□□□□ -0.73
UBE3B-212ENST00000540230 CYB561D1Q8N8Q1 229 aa10.51□□□□□ -0.73
UBE3B-212ENST00000540230 C18orf15Q96N68 181 aa10.51□□□□□ -0.73
UBE3B-212ENST00000540230 ATG101Q9BSB4 218 aa10.51□□□□□ -0.73
UBE3B-212ENST00000540230 IGLV2-18A0A075B6J9 118 aa10.5□□□□□ -0.73
UBE3B-212ENST00000540230 TRAV21A0A0B4J279 112 aa10.5□□□□□ -0.73
UBE3B-212ENST00000540230 M0R2N4 97 aa10.5□□□□□ -0.73
UBE3B-212ENST00000540230 GNRH2O43555 120 aa10.5□□□□□ -0.73
UBE3B-212ENST00000540230 SEC11BP0C7V7 166 aa10.5□□□□□ -0.73
UBE3B-212ENST00000540230 FLI1Q01543 452 aaPredicted RBP10.5□□□□□ -0.73
UBE3B-212ENST00000540230 TDRG1Q3Y452 100 aa10.5□□□□□ -0.73
UBE3B-212ENST00000540230 TMUB2Q71RG4 321 aa10.5□□□□□ -0.73
UBE3B-212ENST00000540230 PRNTQ86SH4 94 aa10.5□□□□□ -0.73
UBE3B-212ENST00000540230 TMEM75Q8N9X5 138 aa10.5□□□□□ -0.73
UBE3B-212ENST00000540230 C11orf21Q9P2W6 132 aa10.5□□□□□ -0.73
UBE3B-212ENST00000540230 IGHV3-53P01767 116 aa10.49□□□□□ -0.73
UBE3B-212ENST00000540230 TYMSP04818 313 aa10.49□□□□□ -0.73
UBE3B-212ENST00000540230 RNF212Q495C1 297 aa10.49□□□□□ -0.73
UBE3B-212ENST00000540230 LCE2DQ5TA82 110 aaPredicted RBP10.49□□□□□ -0.73
UBE3B-212ENST00000540230 VSIG2Q96IQ7 327 aa10.49□□□□□ -0.73
UBE3B-212ENST00000540230 NDFIP1Q9BT67 221 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms