RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 Q6AWC8 147 aa9.49□□□□□ -0.89
CCDC130-202ENST00000540216 LINC00612Q8N6U2 182 aa9.49□□□□□ -0.89
CCDC130-202ENST00000540216 ZNF471Q9BX82 626 aaPredicted RBP9.49□□□□□ -0.89
CCDC130-202ENST00000540216 NKX6-2Q9C056 277 aaPredicted RBP9.49□□□□□ -0.89
CCDC130-202ENST00000540216 DYNC2H1Q8NCM8 4307 aaKnown RBP9.48□□□□□ -0.89
CCDC130-202ENST00000540216 IGHV1OR15-1A0A075B7D0 117 aa9.48□□□□□ -0.89
CCDC130-202ENST00000540216 MAP1LC3B2A6NCE7 125 aa9.48□□□□□ -0.89
CCDC130-202ENST00000540216 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
CCDC130-202ENST00000540216 GGTLC3B5MD39 225 aa9.48□□□□□ -0.89
CCDC130-202ENST00000540216 TCRAP04437 139 aa9.48□□□□□ -0.89
CCDC130-202ENST00000540216 ATP5G1P05496 136 aa9.48□□□□□ -0.89
CCDC130-202ENST00000540216 ATP5G3P48201 142 aa9.48□□□□□ -0.89
CCDC130-202ENST00000540216 SUMO1P63165 101 aaKnown RBP9.48□□□□□ -0.89
CCDC130-202ENST00000540216 GNG5P63218 68 aa9.48□□□□□ -0.89
CCDC130-202ENST00000540216 IBA57Q5T440 356 aaKnown RBP9.48□□□□□ -0.89
CCDC130-202ENST00000540216 STOML3Q8TAV4 291 aa9.48□□□□□ -0.89
CCDC130-202ENST00000540216 NDFIP1Q9BT67 221 aa9.48□□□□□ -0.89
CCDC130-202ENST00000540216 MAP1LC3BQ9GZQ8 125 aa9.48□□□□□ -0.89
CCDC130-202ENST00000540216 TPT1P13693 172 aaKnown RBP9.47□□□□□ -0.89
CCDC130-202ENST00000540216 TCL1AP56279 114 aa9.47□□□□□ -0.89
CCDC130-202ENST00000540216 DPPA3Q6W0C5 159 aa9.47□□□□□ -0.89
CCDC130-202ENST00000540216 TMUB2Q71RG4 321 aa9.47□□□□□ -0.89
CCDC130-202ENST00000540216 CYB561D1Q8N8Q1 229 aa9.47□□□□□ -0.89
CCDC130-202ENST00000540216 C11orf72Q8NBR9 251 aa9.47□□□□□ -0.89
CCDC130-202ENST00000540216 ATG101Q9BSB4 218 aa9.47□□□□□ -0.89
CCDC130-202ENST00000540216 EPDR1Q9UM22 224 aa9.47□□□□□ -0.89
CCDC130-202ENST00000540216 TRAV8-1A0A0A6YYK1 113 aa9.46□□□□□ -0.9
CCDC130-202ENST00000540216 C1QBP02746 253 aa9.46□□□□□ -0.9
CCDC130-202ENST00000540216 P0DMU3 169 aa9.46□□□□□ -0.9
CCDC130-202ENST00000540216 FAM231AP0DMU4 169 aa9.46□□□□□ -0.9
CCDC130-202ENST00000540216 FAM231CP0DMU5 169 aa9.46□□□□□ -0.9
CCDC130-202ENST00000540216 C15orf53Q8NAA6 179 aa9.46□□□□□ -0.9
CCDC130-202ENST00000540216 TREM1Q9NP99 234 aa9.46□□□□□ -0.9
CCDC130-202ENST00000540216 GSN-AS1Q9NRJ2 163 aa9.46□□□□□ -0.9
CCDC130-202ENST00000540216 ARL2-SNX15V9GYD0 113 aa9.46□□□□□ -0.9
CCDC130-202ENST00000540216 FGF8P55075 233 aaPredicted RBP9.45□□□□□ -0.9
CCDC130-202ENST00000540216 ZNF415Q09FC8 603 aa9.45□□□□□ -0.9
CCDC130-202ENST00000540216 TDRG1Q3Y452 100 aa9.45□□□□□ -0.9
CCDC130-202ENST00000540216 EIF5AL1Q6IS14 154 aaKnown RBP9.45□□□□□ -0.9
CCDC130-202ENST00000540216 TMEM88Q6PEY1 159 aa9.45□□□□□ -0.9
CCDC130-202ENST00000540216 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
CCDC130-202ENST00000540216 AKAP14Q86UN6 197 aa9.45□□□□□ -0.9
CCDC130-202ENST00000540216 TMEM75Q8N9X5 138 aa9.45□□□□□ -0.9
CCDC130-202ENST00000540216 C18orf15Q96N68 181 aa9.45□□□□□ -0.9
CCDC130-202ENST00000540216 TCEAL7Q9BRU2 100 aa9.45□□□□□ -0.9
CCDC130-202ENST00000540216 TMPRSS5Q9H3S3 457 aa9.45□□□□□ -0.9
CCDC130-202ENST00000540216 TRGV11A0A075B6L2 103 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 TRAV21A0A0B4J279 112 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 FAM74A7A6NL05 159 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 F5H768 121 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 IFNA7P01567 189 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 FHITP49789 147 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 PPT1P50897 306 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 UBE2G2P60604 165 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 FLI1Q01543 452 aaPredicted RBP9.44□□□□□ -0.9
CCDC130-202ENST00000540216 LGALS9BQ3B8N2 356 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 LGALSLQ3ZCW2 172 aaPredicted RBP9.44□□□□□ -0.9
CCDC130-202ENST00000540216 SAPCD1Q5SSQ6 148 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 FAM213BQ8TBF2 198 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 MBD3L1Q8WWY6 194 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 HIST1H2BAQ96A08 127 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 TVP23CQ96ET8 276 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 PSG8Q9UQ74 426 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 KLF12Q9Y4X4 402 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 LYSTQ99698 3801 aa9.44□□□□□ -0.9
CCDC130-202ENST00000540216 ALMS1Q8TCU4 4167 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 GAGE12BA1L429 117 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 F6UZH7 168 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 SPINK4O60575 86 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 GAGE7O76087 117 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 IGLV2-11P01706 119 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 GAGE12FP0CL80 117 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 GAGE12GP0CL81 117 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 GAGE12IP0CL82 117 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 ZFP69Q49AA0 526 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 MUC21Q5SSG8 566 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 Q6ZQT7 251 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 Q6ZTI0 123 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 SFT2D1Q8WV19 159 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 TP53TG3Q9ULZ0 132 aa9.43□□□□□ -0.9
CCDC130-202ENST00000540216 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
CCDC130-202ENST00000540216 TRGV1A0A0A0MS02 117 aa9.42□□□□□ -0.9
CCDC130-202ENST00000540216 PEX7O00628 323 aa9.42□□□□□ -0.9
CCDC130-202ENST00000540216 RAB5CP51148 216 aa9.42□□□□□ -0.9
CCDC130-202ENST00000540216 POM121L12Q8N7R1 296 aa9.42□□□□□ -0.9
CCDC130-202ENST00000540216 KCNS1Q96KK3 526 aa9.42□□□□□ -0.9
CCDC130-202ENST00000540216 SGK494Q96LW2 274 aa9.42□□□□□ -0.9
CCDC130-202ENST00000540216 SPXQ9BT56 116 aa9.42□□□□□ -0.9
CCDC130-202ENST00000540216 hCG_2014768A0A024R1R8 64 aa9.41□□□□□ -0.9
CCDC130-202ENST00000540216 H2AFB1P0C5Y9 115 aa9.41□□□□□ -0.9
CCDC130-202ENST00000540216 TMEM183BQ1AE95 376 aa9.41□□□□□ -0.9
CCDC130-202ENST00000540216 SMUG1Q53HV7 270 aa9.41□□□□□ -0.9
CCDC130-202ENST00000540216 PRNTQ86SH4 94 aa9.41□□□□□ -0.9
CCDC130-202ENST00000540216 TMEM183AQ8IXX5 376 aa9.41□□□□□ -0.9
CCDC130-202ENST00000540216 C8orf49Q96NF6 230 aa9.41□□□□□ -0.9
CCDC130-202ENST00000540216 NAGKQ9UJ70 344 aa9.41□□□□□ -0.9
CCDC130-202ENST00000540216 RYR2Q92736 4967 aa9.4□□□□□ -0.9
CCDC130-202ENST00000540216 H3BNG1 76 aa9.4□□□□□ -0.9
CCDC130-202ENST00000540216 GCGP01275 180 aa9.4□□□□□ -0.9
CCDC130-202ENST00000540216 PFN1P07737 140 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms