RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 hADV29S1A0JD25 119 aa4.74□□□□□ -1.65
SNHG1-211ENST00000539921 H7C423 109 aa4.74□□□□□ -1.65
SNHG1-211ENST00000539921 BUB3O43684 328 aa4.74□□□□□ -1.65
SNHG1-211ENST00000539921 OXTP01178 125 aa4.74□□□□□ -1.65
SNHG1-211ENST00000539921 LCE2AQ5TA79 106 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-211ENST00000539921 MORN5Q5VZ52 161 aa4.74□□□□□ -1.65
SNHG1-211ENST00000539921 RNF152Q8N8N0 203 aa4.74□□□□□ -1.65
SNHG1-211ENST00000539921 DCANP1Q8TF63 244 aa4.74□□□□□ -1.65
SNHG1-211ENST00000539921 SCNM1Q9BWG6 230 aa4.74□□□□□ -1.65
SNHG1-211ENST00000539921 KLK5Q9Y337 293 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-211ENST00000539921 HEATR1Q9H583 2144 aaKnown RBP4.73□□□□□ -1.65
SNHG1-211ENST00000539921 USF3Q68DE3 2245 aa4.73□□□□□ -1.65
SNHG1-211ENST00000539921 IGHV4-4A0A075B6R2 117 aa4.73□□□□□ -1.65
SNHG1-211ENST00000539921 IGKV1D-37A0A075B6S9 117 aa4.73□□□□□ -1.65
SNHG1-211ENST00000539921 TMEM223A0PJW6 202 aa4.73□□□□□ -1.65
SNHG1-211ENST00000539921 TMEM178BH3BS89 294 aa4.73□□□□□ -1.65
SNHG1-211ENST00000539921 IGHG2P01859 326 aa4.73□□□□□ -1.65
SNHG1-211ENST00000539921 VMA21Q3ZAQ7 101 aa4.73□□□□□ -1.65
SNHG1-211ENST00000539921 GUSBP11Q6P575 273 aa4.73□□□□□ -1.65
SNHG1-211ENST00000539921 CEMP1Q6PRD7 247 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-211ENST00000539921 FAM216BQ8N7L0 139 aa4.73□□□□□ -1.65
SNHG1-211ENST00000539921 ADAMTS20P59510 1910 aa4.73□□□□□ -1.65
SNHG1-211ENST00000539921 ARID1BQ8NFD5 2236 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-211ENST00000539921 IGLV3-12A0A075B6K2 115 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 FAM236DA0A1B0GTK5 79 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 A0A1W2PPC4 97 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 F8W735 103 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-211ENST00000539921 M0R381 172 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 PROP1O75360 226 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 FAM236CP0DP71 79 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 CRIP2P52943 208 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-211ENST00000539921 CFHR3Q02985 330 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 CD164Q04900 197 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 DEFB110Q30KQ9 67 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 PRNTQ86SH4 94 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 SIRPDQ9H106 197 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 NDUFA4L2Q9NRX3 87 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 SLC25A15Q9Y619 301 aa4.72□□□□□ -1.65
SNHG1-211ENST00000539921 DYSFO75923 2080 aa4.71□□□□□ -1.65
SNHG1-211ENST00000539921 TRBV19A0A075B6N1 114 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 IGKV3D-15A0A087WSY6 115 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 TRBV7-1A0A0A6YYK4 115 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 A0A0J9YXY3 114 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 NDUFC1O43677 76 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 NDUFA3O95167 84 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 ZNF134P52741 427 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 SYNJ2BPP57105 145 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 ERCC8Q13216 396 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-211ENST00000539921 LINC00311Q8N616 119 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 CD177Q8N6Q3 437 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 C3orf56Q8N813 242 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 MBD3L2Q8NHZ7 208 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-211ENST00000539921 TMEM141Q96I45 108 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 DSCR8Q96T75 97 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 SLC50A1Q9BRV3 221 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 TIMM21Q9BVV7 248 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 SMIM2Q9BVW6 85 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 SRXN1Q9BYN0 137 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 ICOSQ9Y6W8 199 aa4.71□□□□□ -1.66
SNHG1-211ENST00000539921 TRAV3A0A0B4J244 114 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 TRBV10-3A0A0K0K1G6 114 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 KNCNA6PVL3 124 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 H0Y8X5 98 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 ZNF561-AS1K7EIQ3 104 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 TRIAP1O43715 76 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 ZFAND5O76080 213 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 ZNF883P0CG24 379 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 CRIP1P50238 77 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 TCF15Q12870 199 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 S100A7L2Q5SY68 101 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 NRACQ8N912 160 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 TMEM167AQ8TBQ9 72 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 PSMG3-AS1Q96PY0 264 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 SCGB3A1Q96QR1 104 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 AMELXQ99217 191 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 TIMM17AQ99595 171 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 VKORC1Q9BQB6 163 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 OVOL2Q9BRP0 275 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 C16orf95Q9H693 158 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 LINC00574Q9H8X3 128 aa4.7□□□□□ -1.66
SNHG1-211ENST00000539921 TRBV7-6A0A0J9YX20 115 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 C10orf142B7Z368 130 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 LEPROTO15243 131 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 PSPNO60542 156 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 TIMM17BO60830 172 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 SH2D1AO60880 128 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 CD59P13987 128 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 ZNF22P17026 224 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-211ENST00000539921 SSR4P51571 173 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 ASPHD1Q5U4P2 390 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 C16orf47Q6ZP98 133 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-211ENST00000539921 Q6ZRU5 148 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 FAM19A1Q7Z5A9 133 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 EXOC3-AS1Q8N2X6 119 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 GNG12Q9UBI6 72 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 RPUSD1Q9UJJ7 312 aaKnown RBP4.69□□□□□ -1.66
SNHG1-211ENST00000539921 MYO9BQ13459 2157 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 HTTP42858 3142 aa4.69□□□□□ -1.66
SNHG1-211ENST00000539921 A0A0U1RRA0 63 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms