RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 OR8A1Q8NGG7 326 aa9.48□□□□□ -0.89
CCDC42-202ENST00000539522 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
CCDC42-202ENST00000539522 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
CCDC42-202ENST00000539522 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
CCDC42-202ENST00000539522 CLUHP3Q96NS8 147 aa9.48□□□□□ -0.89
CCDC42-202ENST00000539522 TMEM242Q9NWH2 141 aa9.48□□□□□ -0.89
CCDC42-202ENST00000539522 KIR2DL5BA0A0G2JN68 375 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 KIR2DL5BA0A0G2JPC4 375 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 PGPEP1LA6NFU8 196 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 PPP1R2P9O14990 202 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 CRXO43186 299 aaPredicted RBP9.47□□□□□ -0.89
CCDC42-202ENST00000539522 FXYD7P58549 80 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 KIR3DS1Q14943 382 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 EBLN2Q6P2I7 272 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 C9orf47Q6ZRZ4 202 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 STHQ8IWL8 128 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 KIR2DL5AQ8N109 375 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 KIR2DL5BQ8NHK3 375 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 ISOC2Q96AB3 205 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 MLST8Q9BVC4 326 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 SMCO4Q9NRQ5 59 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 PPP1R14DQ9NXH3 145 aa9.47□□□□□ -0.89
CCDC42-202ENST00000539522 IGKV2-40A0A087WW87 121 aaPredicted RBP9.46□□□□□ -0.9
CCDC42-202ENST00000539522 TRAV8-1A0A0A6YYK1 113 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 NPIPB6E9PJ23 425 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 DUSP14O95147 198 aaKnown RBP9.46□□□□□ -0.9
CCDC42-202ENST00000539522 IGKV2D-40P01614 121 aaPredicted RBP9.46□□□□□ -0.9
CCDC42-202ENST00000539522 RBMY1A1P0DJD3 496 aaKnown RBP9.46□□□□□ -0.9
CCDC42-202ENST00000539522 RBMY1CP0DJD4 496 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 CT45A10P0DMU9 189 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 MGST1P10620 155 aaKnown RBP9.46□□□□□ -0.9
CCDC42-202ENST00000539522 ERCC8Q13216 396 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 RBMY1FQ15415 496 aaKnown RBP9.46□□□□□ -0.9
CCDC42-202ENST00000539522 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 FAM19A4Q96LR4 140 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 VGLL1Q99990 258 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 OVOL2Q9BRP0 275 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 AGPAT4-IT1Q9H0P7 198 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 CSTL1Q9H114 145 aa9.46□□□□□ -0.9
CCDC42-202ENST00000539522 CSMD3Q7Z407 3707 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 STAB2Q8WWQ8 2551 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 CXorf65A6NEN9 183 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 K7EN84 100 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 SCO1O75880 301 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 ZNF138P52744 262 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 HIST1H1AQ02539 215 aaPredicted RBP9.45□□□□□ -0.9
CCDC42-202ENST00000539522 BTN1A1Q13410 526 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 DEFB135Q30KP9 77 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 RNF212Q495C1 297 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 TMEM78Q5T7P6 136 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 COX8CQ7Z4L0 72 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 Q86TA4 180 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 C15orf54Q8N8G6 183 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 OR4B1Q8NGF8 309 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 OR10G8Q8NGN5 311 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 SFRP2Q96HF1 295 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 NDFIP1Q9BT67 221 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 OSTCQ9NRP0 149 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 LENEPQ9Y5L5 61 aa9.45□□□□□ -0.9
CCDC42-202ENST00000539522 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
CCDC42-202ENST00000539522 ERVFC1-1P60608 527 aa9.44□□□□□ -0.9
CCDC42-202ENST00000539522 OR5I1Q13606 314 aa9.44□□□□□ -0.9
CCDC42-202ENST00000539522 FAM231DQ6ZW35 169 aa9.44□□□□□ -0.9
CCDC42-202ENST00000539522 RNF183Q96D59 192 aa9.44□□□□□ -0.9
CCDC42-202ENST00000539522 DAZAP1Q96EP5 407 aaKnown RBP9.44□□□□□ -0.9
CCDC42-202ENST00000539522 ZNF492Q9P255 531 aa9.44□□□□□ -0.9
CCDC42-202ENST00000539522 H7BYZ3 331 aa9.43□□□□□ -0.9
CCDC42-202ENST00000539522 M0R2Z0 102 aa9.43□□□□□ -0.9
CCDC42-202ENST00000539522 APOC4P55056 127 aa9.43□□□□□ -0.9
CCDC42-202ENST00000539522 SPINK13Q1W4C9 94 aa9.43□□□□□ -0.9
CCDC42-202ENST00000539522 PRR9Q5T870 116 aa9.43□□□□□ -0.9
CCDC42-202ENST00000539522 Q6ZQT7 251 aa9.43□□□□□ -0.9
CCDC42-202ENST00000539522 Q6ZWC4 215 aa9.43□□□□□ -0.9
CCDC42-202ENST00000539522 C1orf158Q8N1D5 194 aa9.43□□□□□ -0.9
CCDC42-202ENST00000539522 NHLRC2Q8NBF2 726 aa9.43□□□□□ -0.9
CCDC42-202ENST00000539522 XCL2Q9UBD3 114 aa9.43□□□□□ -0.9
CCDC42-202ENST00000539522 DYNC2H1Q8NCM8 4307 aaKnown RBP9.42□□□□□ -0.9
CCDC42-202ENST00000539522 TRBV7-9A0A0J9YWB2 115 aa9.42□□□□□ -0.9
CCDC42-202ENST00000539522 UBE2CO00762 179 aa9.42□□□□□ -0.9
CCDC42-202ENST00000539522 SMUG1Q53HV7 270 aa9.42□□□□□ -0.9
CCDC42-202ENST00000539522 IBA57Q5T440 356 aaKnown RBP9.42□□□□□ -0.9
CCDC42-202ENST00000539522 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
CCDC42-202ENST00000539522 NUDT10Q8NFP7 164 aa9.42□□□□□ -0.9
CCDC42-202ENST00000539522 Q8TAT8 98 aa9.42□□□□□ -0.9
CCDC42-202ENST00000539522 NUDT11Q96G61 164 aa9.42□□□□□ -0.9
CCDC42-202ENST00000539522 ODF3Q96PU9 254 aa9.42□□□□□ -0.9
CCDC42-202ENST00000539522 IMMP2LQ96T52 175 aa9.42□□□□□ -0.9
CCDC42-202ENST00000539522 X6R8D5 127 aa9.42□□□□□ -0.9
CCDC42-202ENST00000539522 STARD9Q9P2P6 4700 aa9.42□□□□□ -0.9
CCDC42-202ENST00000539522 TRAV12-2A0A075B6T6 113 aa9.41□□□□□ -0.9
CCDC42-202ENST00000539522 GATCO43716 136 aaKnown RBP9.41□□□□□ -0.9
CCDC42-202ENST00000539522 PRM2P04554 102 aa9.41□□□□□ -0.9
CCDC42-202ENST00000539522 NHLRC4P0CG21 123 aaPredicted RBP9.41□□□□□ -0.9
CCDC42-202ENST00000539522 TMEM88Q6PEY1 159 aa9.41□□□□□ -0.9
CCDC42-202ENST00000539522 ZFAND2AQ8N6M9 145 aa9.41□□□□□ -0.9
CCDC42-202ENST00000539522 RCHY1Q96PM5 261 aa9.41□□□□□ -0.9
CCDC42-202ENST00000539522 SPATA25Q9BR10 227 aa9.41□□□□□ -0.9
CCDC42-202ENST00000539522 C19orf71A6NCJ1 209 aa9.4□□□□□ -0.9
CCDC42-202ENST00000539522 FABP5P3A8MUU1 101 aa9.4□□□□□ -0.9
CCDC42-202ENST00000539522 SPRY2O43597 315 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms