RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 H3BMM0 161 aa7.89□□□□□ -1.15
LEMD3-202ENST00000539442 CRISP2P16562 243 aa7.89□□□□□ -1.15
LEMD3-202ENST00000539442 LEPP41159 167 aa7.89□□□□□ -1.15
LEMD3-202ENST00000539442 SMUG1Q53HV7 270 aa7.89□□□□□ -1.15
LEMD3-202ENST00000539442 ACTL10Q5JWF8 245 aa7.89□□□□□ -1.15
LEMD3-202ENST00000539442 NHLRC2Q8NBF2 726 aa7.89□□□□□ -1.15
LEMD3-202ENST00000539442 VWFP04275 2813 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 ANK2Q01484 3957 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 PPP1R2P9O14990 202 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 TSPOP30536 169 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 EGFEM1PQ0D2K5 195 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 FAM231DQ6ZW35 169 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 APRG1Q8IVJ8 170 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 STHQ8IWL8 128 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 OR4B1Q8NGF8 309 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 ZC2HC1AQ96GY0 325 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 SFRP2Q96HF1 295 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 C8orf49Q96NF6 230 aa7.88□□□□□ -1.15
LEMD3-202ENST00000539442 AURKAIP1Q9NWT8 199 aaPredicted RBP7.88□□□□□ -1.15
LEMD3-202ENST00000539442 A0A087WWC5 75 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 C7orf77A4D0Y5 90 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 C19orf71A6NCJ1 209 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 KLLNB2CW77 178 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 MT-ND4LP03901 98 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 OR5I1Q13606 314 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 ZNF124Q15973 351 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 PRR27Q6MZM9 219 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 AMTNQ6UX39 209 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 ZFAND2AQ8N6M9 145 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 C15orf54Q8N8G6 183 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 ANAPC16Q96DE5 110 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 DAZAP1Q96EP5 407 aaKnown RBP7.87□□□□□ -1.15
LEMD3-202ENST00000539442 ASCL2Q99929 193 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 KRTAP17-1Q9BYP8 105 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 CTDSP1Q9GZU7 261 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 OSTCQ9NRP0 149 aa7.87□□□□□ -1.15
LEMD3-202ENST00000539442 AMBPP02760 352 aa7.86□□□□□ -1.15
LEMD3-202ENST00000539442 PFN1P07737 140 aaKnown RBP7.86□□□□□ -1.15
LEMD3-202ENST00000539442 CDKN1BP46527 198 aa7.86□□□□□ -1.15
LEMD3-202ENST00000539442 ERVFC1-1P60608 527 aa7.86□□□□□ -1.15
LEMD3-202ENST00000539442 IBA57Q5T440 356 aaKnown RBP7.86□□□□□ -1.15
LEMD3-202ENST00000539442 FAM162BQ5T6X4 162 aa7.86□□□□□ -1.15
LEMD3-202ENST00000539442 TRPT1Q86TN4 253 aaKnown RBP7.86□□□□□ -1.15
LEMD3-202ENST00000539442 OR10G8Q8NGN5 311 aa7.86□□□□□ -1.15
LEMD3-202ENST00000539442 RPS10P5Q9NQ39 176 aa7.86□□□□□ -1.15
LEMD3-202ENST00000539442 TMEM242Q9NWH2 141 aa7.86□□□□□ -1.15
LEMD3-202ENST00000539442 NOTCH3Q9UM47 2321 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 TRAV21A0A0B4J279 112 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 FABP5P3A8MUU1 101 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 IGKV3-20P01619 116 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 P01737 135 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 GPX1P07203 203 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 CRIP1P50238 77 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 NUTF2P61970 127 aaKnown RBP7.85□□□□□ -1.15
LEMD3-202ENST00000539442 RNF212Q495C1 297 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 CT83Q5H943 113 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 SAMD5Q5TGI4 173 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 Q6AWC8 147 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 ATRAIDQ6UW56 229 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 LINC00322Q6ZN03 302 aaPredicted RBP7.85□□□□□ -1.15
LEMD3-202ENST00000539442 NUDT10Q8NFP7 164 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 NUDT11Q96G61 164 aa7.85□□□□□ -1.15
LEMD3-202ENST00000539442 RNASE7Q9H1E1 156 aaKnown RBP7.85□□□□□ -1.15
LEMD3-202ENST00000539442 TRRAPQ9Y4A5 3859 aa7.84□□□□□ -1.15
LEMD3-202ENST00000539442 C7orf71A4D174 169 aa7.84□□□□□ -1.15
LEMD3-202ENST00000539442 RBMY1BA6NDE4 496 aaKnown RBP7.84□□□□□ -1.15
LEMD3-202ENST00000539442 RBMY1EA6NEQ0 496 aaKnown RBP7.84□□□□□ -1.15
LEMD3-202ENST00000539442 H7BYZ3 331 aa7.84□□□□□ -1.15
LEMD3-202ENST00000539442 GATCO43716 136 aaKnown RBP7.84□□□□□ -1.15
LEMD3-202ENST00000539442 SH2D1AO60880 128 aa7.84□□□□□ -1.15
LEMD3-202ENST00000539442 RBMY1DP0C7P1 496 aaKnown RBP7.84□□□□□ -1.15
LEMD3-202ENST00000539442 ZNF80P51504 273 aaPredicted RBP7.84□□□□□ -1.15
LEMD3-202ENST00000539442 SPINK13Q1W4C9 94 aa7.84□□□□□ -1.15
LEMD3-202ENST00000539442 PRR9Q5T870 116 aa7.84□□□□□ -1.15
LEMD3-202ENST00000539442 MORN3Q6PF18 240 aaPredicted RBP7.84□□□□□ -1.15
LEMD3-202ENST00000539442 Q8N1Y9 231 aa7.84□□□□□ -1.15
LEMD3-202ENST00000539442 DEFB125Q8N687 156 aa7.84□□□□□ -1.15
LEMD3-202ENST00000539442 WFDC10AQ9H1F0 79 aa7.84□□□□□ -1.15
LEMD3-202ENST00000539442 RPP21Q9H633 154 aaKnown RBP7.84□□□□□ -1.15
LEMD3-202ENST00000539442 V9GYV3 84 aa7.84□□□□□ -1.15
LEMD3-202ENST00000539442 SORL1Q92673 2214 aa7.83□□□□□ -1.16
LEMD3-202ENST00000539442 CXorf65A6NEN9 183 aa7.83□□□□□ -1.16
LEMD3-202ENST00000539442 A6NJY4 79 aa7.83□□□□□ -1.16
LEMD3-202ENST00000539442 ZNF705GA8MUZ8 300 aaPredicted RBP7.83□□□□□ -1.16
LEMD3-202ENST00000539442 M0R2Z0 102 aa7.83□□□□□ -1.16
LEMD3-202ENST00000539442 BTN1A1Q13410 526 aa7.83□□□□□ -1.16
LEMD3-202ENST00000539442 C20orf144Q9BQM9 153 aa7.83□□□□□ -1.16
LEMD3-202ENST00000539442 SRD5A3Q9H8P0 318 aa7.83□□□□□ -1.16
LEMD3-202ENST00000539442 XKRY2A2RUG3 117 aa7.82□□□□□ -1.16
LEMD3-202ENST00000539442 G3V4G9 280 aa7.82□□□□□ -1.16
LEMD3-202ENST00000539442 J3KRW8 73 aa7.82□□□□□ -1.16
LEMD3-202ENST00000539442 RNASE4P34096 147 aaKnown RBP7.82□□□□□ -1.16
LEMD3-202ENST00000539442 KRTAP10-11P60412 298 aa7.82□□□□□ -1.16
LEMD3-202ENST00000539442 RPS20P60866 119 aaKnown RBP7.82□□□□□ -1.16
LEMD3-202ENST00000539442 GFI1BQ5VTD9 330 aa7.82□□□□□ -1.16
LEMD3-202ENST00000539442 OR2D3Q8NGH3 330 aa7.82□□□□□ -1.16
LEMD3-202ENST00000539442 IMMP2LQ96T52 175 aa7.82□□□□□ -1.16
LEMD3-202ENST00000539442 C1QTNF4Q9BXJ3 329 aa7.82□□□□□ -1.16
LEMD3-202ENST00000539442 KRTAP4-11Q9BYQ6 195 aa7.82□□□□□ -1.16
LEMD3-202ENST00000539442 SMCO4Q9NRQ5 59 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms