RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 SLC35B3Q9H1N7 401 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 CDC42SE1Q9NRR8 79 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 MPC1Q9Y5U8 109 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 LAMB2P55268 1798 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 FREM3P0C091 2139 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 TRPM7Q96QT4 1865 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 USP54Q70EL1 1684 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 PRG4Q92954 1404 aaPredicted RBP1.32□□□□□ -2.2
SNHG1-210ENST00000539303 BAHCC1Q9P281 2608 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 IFITM5A6NNB3 132 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 BBIP1A8MTZ0 92 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 ZNF670-ZNF695F2Z2N8 137 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 YPEL1O60688 119 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 PLGLB1Q02325 96 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 ASB16-AS1Q495Z4 193 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 IZUMO2Q6UXV1 221 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 ZCCHC23Q6ZST2 131 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 C5orf17Q8NAS9 161 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 OR10AG1Q8NH19 301 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 PATE1Q8WXA2 126 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 LSM2Q9Y333 95 aaKnown RBP1.32□□□□□ -2.2
SNHG1-210ENST00000539303 CHD3Q12873 2000 aaKnown RBP1.32□□□□□ -2.2
SNHG1-210ENST00000539303 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.32□□□□□ -2.2
SNHG1-210ENST00000539303 ARHGAP31Q2M1Z3 1444 aa1.32□□□□□ -2.2
SNHG1-210ENST00000539303 TRBV20-1A0A075B6N2 111 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 FAM92AA1XBS5 289 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 LINC00587B1AMM8 73 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 DLEU1O43261 78 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 COX7CP15954 63 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 GUCA1AP43080 201 aaPredicted RBP1.31□□□□□ -2.2
SNHG1-210ENST00000539303 KRTAP12-1P59990 96 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 EMX2Q04743 252 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 SPCS2Q15005 226 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 KRTAP26-1Q6PEX3 210 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.31□□□□□ -2.2
SNHG1-210ENST00000539303 SAR1AQ9NR31 198 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 SNURFQ9Y675 71 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 HIVEP2P31629 2446 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 FGD6Q6ZV73 1430 aa1.31□□□□□ -2.2
SNHG1-210ENST00000539303 VWDEQ8N2E2 1590 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 NINQ8N4C6 2090 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 A0A0G2JMM0 328 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 TRBV6-4A0A1B0GX49 114 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 A0A1W2PPB8 328 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 A6NN06 94 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 KIR3DP1A8MWS1 328 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 CDC42EP2O14613 210 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 MRPS14O60783 128 aaKnown RBP1.3□□□□□ -2.2
SNHG1-210ENST00000539303 DNAL4O96015 105 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 IDO2Q6ZQW0 420 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 C3orf62Q6ZUJ4 267 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 SNX29P2Q8IUI4 249 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 ATOH7Q8N100 152 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 C2orf88Q9BSF0 95 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 PSMG3Q9BT73 122 aaPredicted RBP1.3□□□□□ -2.2
SNHG1-210ENST00000539303 TMEM191AQ9H0A3 160 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 MED9Q9NWA0 146 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 ROCK2O75116 1388 aaKnown RBP1.3□□□□□ -2.2
SNHG1-210ENST00000539303 TNRC6AQ8NDV7 1962 aaKnown RBP1.3□□□□□ -2.2
SNHG1-210ENST00000539303 EXPH5Q8NEV8 1989 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 ARFGEF3Q5TH69 2177 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 MUC4Q99102 2169 aa1.3□□□□□ -2.2
SNHG1-210ENST00000539303 SIP14410 1827 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 KIF13AQ9H1H9 1805 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 ANK1P16157 1881 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 MYH9P35579 1960 aaKnown RBP1.29□□□□□ -2.2
SNHG1-210ENST00000539303 APOC1P02654 83 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 PYYP10082 97 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 MPV17LQ2QL34 196 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 CCSMST1Q4G0I0 132 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 PCOTHQ58A44 107 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 SDF2Q99470 211 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 TMEM14CQ9P0S9 112 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 NOP16Q9Y3C1 178 aaKnown RBP1.29□□□□□ -2.2
SNHG1-210ENST00000539303 INTS1Q8N201 2190 aaKnown RBP1.29□□□□□ -2.2
SNHG1-210ENST00000539303 CACNA1GO43497 2377 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 WDR7Q9Y4E6 1490 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 PHLPP1O60346 1717 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 KIAA1549LQ6ZVL6 1849 aa1.29□□□□□ -2.2
SNHG1-210ENST00000539303 ALPK3Q96L96 1907 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 A0A1W2PRS3 328 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 M0R2P5 195 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 GEMIN2O14893 280 aaKnown RBP1.28□□□□□ -2.2
SNHG1-210ENST00000539303 CCL25O15444 150 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 NUPR1O60356 82 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 MIC13Q5XKP0 118 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 ATP11AUNQ6ZP68 121 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 SLC25A26Q70HW3 274 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 KCNRGQ8N5I3 272 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 TCTEX1D1Q8N7M0 179 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 ATP6V0E2Q8NHE4 81 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 ZNF563Q8TA94 476 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 CGREF1Q99674 301 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 CCDC167Q9P0B6 97 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 PTPRGP23470 1445 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 CECR2Q9BXF3 1484 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 FOCADQ5VW36 1801 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 SPEF2Q9C093 1822 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 EML5Q05BV3 1969 aa1.28□□□□□ -2.2
SNHG1-210ENST00000539303 CR1P17927 2039 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms