RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 HIST3H2BBQ8N257 126 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 C10orf126Q8N4M7 172 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TTC9CQ8N5M4 171 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF525Q8N782 197 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF709Q8N972 641 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF555Q8NEP9 628 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 DEFB108BQ8NET1 73 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 OR5AP2Q8NGF4 316 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 OR5AK2Q8NH90 309 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 CLDND2Q8NHS1 167 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 RFESDQ8TAC1 157 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 BRK1Q8WUW1 75 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 PHLDA1Q8WV24 401 aaPredicted RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 ITLN1Q8WWA0 313 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 IL1F10Q8WWZ1 152 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SRSF12Q8WXF0 261 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SPTSSAQ969W0 71 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM106AQ96A25 262 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM230Q96A57 120 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 PLEKHB2Q96CS7 222 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SLC25A38Q96DW6 304 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 FMC1Q96HJ9 113 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 C2orf48Q96LS8 159 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 GAFA1Q96PS6 74 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 OR4C12Q96R67 309 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 CCL19Q99731 98 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 GGTLC1Q9BX51 225 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TM2D1Q9BX74 207 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 GNB1LQ9BYB4 327 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 MRPL20Q9BYC9 149 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TTTY10Q9BZA0 68 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SELENOIQ9C0D9 397 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 COMMD5Q9GZQ3 224 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SLIRPQ9GZT3 109 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM106BQ9NUM4 274 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TXNL4BQ9NX01 149 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 EHFQ9NZC4 300 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF581Q9P0T4 197 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TAAR3PQ9P1P4 343 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SHPKQ9UHJ6 478 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 FUT9Q9Y231 359 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 NOP16Q9Y3C1 178 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TPRKBQ9Y3C4 175 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 YTHDF2Q9Y5A9 579 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TET2Q6N021 2002 aaPredicted RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 PLECQ15149 4684 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 NOTCH1P46531 2555 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 TRGV10A0A0A0MS01 117 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 IGHV1-69-2A0A0G2JMI3 117 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 A0A1W2PP11 408 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PLAC8L1A1L4L8 177 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 GGT3PA6NGU5 568 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 OR2T8A6NH00 312 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 C17orf98A8MV24 154 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 ODF3BA8MYP8 253 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 B4DEV8 164 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 GGTLC3B5MD39 225 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 LYNX1G3V0Z9 82 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 G3V3Q6 166 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 H3BQ15 152 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 J3QLW9 94 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 J3QQQ9 107 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 K7N7A8 449 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 OVOL1O14753 267 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 AGPAT2O15120 278 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 GSTZ1O43708 216 aaPredicted RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 ANGPTL7O43827 346 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CD5LO43866 347 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 NDUFS5O43920 106 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 SIX6O95475 246 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 NAPSAO96009 420 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CYB5AP00167 134 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 RBP4P02753 201 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 LYNX1P0DP58 116 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 BCL2P10415 239 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CA6P23280 308 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 GADD45AP24522 165 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PRSS3P35030 304 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PFN2P35080 140 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 SRP14P37108 136 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CTRLP40313 264 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 RPS10P46783 165 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 INPP1P49441 399 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PSMB2P49721 201 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF137PP52743 207 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 NDUFV3P56181 108 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CAV3P56539 151 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 TAS2R46P59540 309 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 FGF12P61328 243 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 DAD1P61803 113 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CCL8P80075 99 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PSG9Q00887 426 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PAX8Q06710 450 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 DAZ2Q13117 558 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 EIF4EBP1Q13541 118 aaPredicted RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 HMGN3Q15651 99 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 KISS1Q15726 138 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 C17orf58Q2M2W7 97 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 C12orf74Q32Q52 190 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms