RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 AMTNQ6UX39 209 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 C6orf223Q8N319 242 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 C9orf62Q8N4C0 152 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 FXYD5Q96DB9 178 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 FAM167A-AS1Q96KT0 104 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 LINC00477Q96M19 166 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 NDFIP1Q9BT67 221 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 KRTAP4-5Q9BYR2 181 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 Q9H3A6 140 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 RPH3ALQ9UNE2 315 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 SERTM2A0A1B0GWG4 89 aa7.81□□□□□ -1.16
LMO3-213ENST00000536172 MRPS12O15235 138 aaKnown RBP7.81□□□□□ -1.16
LMO3-213ENST00000536172 CNN1P51911 297 aaKnown RBP7.81□□□□□ -1.16
LMO3-213ENST00000536172 NKX2-5P52952 324 aaPredicted RBP7.81□□□□□ -1.16
LMO3-213ENST00000536172 TMEM256Q8N2U0 113 aa7.81□□□□□ -1.16
LMO3-213ENST00000536172 EXOC3-AS1Q8N2X6 119 aa7.81□□□□□ -1.16
LMO3-213ENST00000536172 ARL6IP6Q8N6S5 226 aa7.81□□□□□ -1.16
LMO3-213ENST00000536172 SAT2Q96F10 170 aaPredicted RBP7.81□□□□□ -1.16
LMO3-213ENST00000536172 TRAV8-2A0A0B4J237 113 aa7.8□□□□□ -1.16
LMO3-213ENST00000536172 SLC17A3O00476 420 aa7.8□□□□□ -1.16
LMO3-213ENST00000536172 ATP5G1P05496 136 aa7.8□□□□□ -1.16
LMO3-213ENST00000536172 ATP5G3P48201 142 aa7.8□□□□□ -1.16
LMO3-213ENST00000536172 SULT1A2P50226 295 aa7.8□□□□□ -1.16
LMO3-213ENST00000536172 FGF8P55075 233 aaPredicted RBP7.8□□□□□ -1.16
LMO3-213ENST00000536172 SUMO1P63165 101 aaKnown RBP7.8□□□□□ -1.16
LMO3-213ENST00000536172 TNP2Q05952 138 aa7.8□□□□□ -1.16
LMO3-213ENST00000536172 MAPKAPK5-AS1Q8N8E1 139 aa7.8□□□□□ -1.16
LMO3-213ENST00000536172 ZNRF2Q8NHG8 242 aa7.8□□□□□ -1.16
LMO3-213ENST00000536172 C20orf173Q96LM9 149 aa7.8□□□□□ -1.16
LMO3-213ENST00000536172 A0A1B0GV50 99 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 A0A1W2PRE2 83 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 FBLL1A6NHQ2 334 aaKnown RBP7.79□□□□□ -1.16
LMO3-213ENST00000536172 CBY3A6NI87 242 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 F5H768 121 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 BOLA2-SMG1P6H3BVE0 249 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 DEFB130BP0DP73 79 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 DEFB130AP0DP74 79 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 TAGLN2P37802 199 aaKnown RBP7.79□□□□□ -1.16
LMO3-213ENST00000536172 CDKN1BP46527 198 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 UBE2G2P60604 165 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 CD300CQ08708 224 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 SPINK13Q1W4C9 94 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 CCDC28AQ8IWP9 274 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 C5orf17Q8NAS9 161 aa7.79□□□□□ -1.16
LMO3-213ENST00000536172 DNAH11Q96DT5 4516 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 RBAKDNA6NC62 111 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 ZNF705GA8MUZ8 300 aaPredicted RBP7.78□□□□□ -1.16
LMO3-213ENST00000536172 CRXO43186 299 aaPredicted RBP7.78□□□□□ -1.16
LMO3-213ENST00000536172 EIF3GO75821 320 aaKnown RBP eCLIP7.78□□□□□ -1.16
LMO3-213ENST00000536172 NDUFB4O95168 129 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 NUDT3O95989 172 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 GPX1P07203 203 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 BTF3P20290 206 aaKnown RBP7.78□□□□□ -1.16
LMO3-213ENST00000536172 ZNF138P52744 262 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 TAS2R60P59551 318 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 RAB14P61106 215 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 TTC32Q5I0X7 151 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 ZNF493Q6ZR52 646 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 MBD3L1Q8WWY6 194 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 C16orf74Q96GX8 76 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 TCEAL7Q9BRU2 100 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 MANBALQ9NQG1 85 aa7.78□□□□□ -1.16
LMO3-213ENST00000536172 DYNC1H1Q14204 4646 aaKnown RBP7.78□□□□□ -1.16
LMO3-213ENST00000536172 M0R2Z0 102 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 M0R3E3 92 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 FHITP49789 147 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 UBE2G1P62253 170 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 ALKAL2Q6UX46 152 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 GOLT1AQ6ZVE7 132 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 Q8N1X5 172 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 HIST1H2BAQ96A08 127 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 ZNF503Q96F45 646 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 LINC01587Q99440 93 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 TXNDC17Q9BRA2 123 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 GNG13Q9P2W3 67 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 TIMM8BQ9Y5J9 83 aaPredicted RBP7.77□□□□□ -1.17
LMO3-213ENST00000536172 ARL2-SNX15V9GYD0 113 aa7.77□□□□□ -1.17
LMO3-213ENST00000536172 PLAC8L1A1L4L8 177 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 DIRC3C9JPN6 131 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 S100A9P06702 114 aaKnown RBP7.76□□□□□ -1.17
LMO3-213ENST00000536172 NMBP08949 121 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 HTN1P15515 57 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 SAPCD1Q5SSQ6 148 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 CYB561D1Q8N8Q1 229 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 SUN5Q8TC36 379 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 ODF3Q96PU9 254 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 C20orf144Q9BQM9 153 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 TMPRSS5Q9H3S3 457 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 EPDR1Q9UM22 224 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 LINC00588Q9Y4M8 146 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 LENEPQ9Y5L5 61 aa7.76□□□□□ -1.17
LMO3-213ENST00000536172 IGKV2-40A0A087WW87 121 aaPredicted RBP7.75□□□□□ -1.17
LMO3-213ENST00000536172 TRAV1-1A0A0B4J248 108 aa7.75□□□□□ -1.17
LMO3-213ENST00000536172 A0A1W2PPQ1 181 aa7.75□□□□□ -1.17
LMO3-213ENST00000536172 NPIPB6E9PJ23 425 aa7.75□□□□□ -1.17
LMO3-213ENST00000536172 J3KRW8 73 aa7.75□□□□□ -1.17
LMO3-213ENST00000536172 PAGE4O60829 102 aa7.75□□□□□ -1.17
LMO3-213ENST00000536172 IGKV2D-40P01614 121 aaPredicted RBP7.75□□□□□ -1.17
LMO3-213ENST00000536172 RNASE4P34096 147 aaKnown RBP7.75□□□□□ -1.17
LMO3-213ENST00000536172 ERCC8Q13216 396 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms