RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 A0A1W2PS18 150 aa6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 TMEM189A5PLL7 270 aa6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 K7EIM0 57 aa6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 CRXO43186 299 aaPredicted RBP6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 ZNF207O43670 478 aaKnown RBP6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 IGKV1-39P01597 117 aa6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 HLA-DQA1P01909 254 aa6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 IGKV1D-39P04432 117 aa6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 C8orf88P0DMB2 117 aa6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 RPP25LQ8N5L8 163 aaKnown RBP6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 CHRDL1Q9BU40 450 aa6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 TMEM14BQ9NUH8 114 aa6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 STAB2Q8WWQ8 2551 aa6.39□□□□□ -1.39
SFSWAP-202ENST00000535202 GRIFINA4D1Z8 144 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 C11orf94C9JXX5 98 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 F8W735 103 aaPredicted RBP6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 NDUFA4O00483 81 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 SYNGR2O43760 224 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 MT-CO2P00403 227 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 STAG3L3P0CL85 134 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 CRYBB3P26998 211 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 PSG9Q00887 426 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 PRCDQ00LT1 54 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 HIST1H1AQ02539 215 aaPredicted RBP6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 ZNF90Q03938 601 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 IZUMO4Q1ZYL8 232 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 SPINK9Q5DT21 86 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 AMMECR1LQ6DCA0 310 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 SIGMAR1Q99720 223 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 TMEM147Q9BVK8 224 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 GGTLC1Q9BX51 225 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 DAZ1Q9NQZ3 744 aaKnown RBP6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 RNF24Q9Y225 148 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 NBEAL2Q6ZNJ1 2754 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 STARD9Q9P2P6 4700 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 RYR2Q92736 4967 aa6.38□□□□□ -1.39
SFSWAP-202ENST00000535202 LOC102724200A0A096LPH7 203 aaPredicted RBP6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 GAGE10A6NGK3 116 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 I3L2K1 104 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 IGHV3-48P01763 117 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 MFAP4P55083 255 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 HSPE1P61604 102 aaKnown RBP6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 UBE2G1P62253 170 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 ERHP84090 104 aaKnown RBP6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 VWC2Q2TAL6 325 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 SLC25A34Q6PIV7 304 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 TMEM14EPQ6UXP3 125 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 C5orf17Q8NAS9 161 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 ZNF114Q8NC26 417 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 OR10G9Q8NGN4 311 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 OR10G7Q8NGN6 311 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 OR1B1Q8NGR6 318 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 C11orf52Q96A22 123 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 SPAG8Q99932 426 aaPredicted RBP6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 VSIRQ9H7M9 311 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 PSENENQ9NZ42 101 aa6.37□□□□□ -1.39
SFSWAP-202ENST00000535202 IGHV3-49A0A0A0MS15 119 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 LCE6AA0A183 80 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 A6NDN8 102 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 C15orf62A8K5M9 175 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 H3BRM9 83 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 J3QR89 54 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 K7EMT4 169 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 K7EP34 96 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 GNG7O60262 68 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 PAGE4O60829 102 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 IGKV1-5P01602 117 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 CTSGP08311 255 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 PMCHP20382 165 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 SLC38A11Q08AI6 406 aa6.36□□□□□ -1.39
SFSWAP-202ENST00000535202 IGHV7-4-1A0A0J9YVY3 117 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 SERTM2A0A1B0GWG4 89 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 OR4C46A6NHA9 309 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 C9orf118A6NHY6 69 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 SNURFLB1AK76 121 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 H0Y8G0 127 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 HMGB3O15347 200 aaKnown RBP6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 MPDU1O75352 247 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 OR5AL1P0C617 328 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 NPPCP23582 126 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 FCGR2BP31994 310 aaPredicted RBP6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 TMEM136Q6ZRR5 245 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 FA2HQ7L5A8 372 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 TMEM116Q8NCL8 245 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 IL17DQ8TAD2 202 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 C18orf32Q8TCD1 76 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 TSKUQ8WUA8 353 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 ZNF414Q96IQ9 312 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 RHPN1-AS1Q9BWJ2 59 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 ENY2Q9NPA8 101 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 OSTCQ9NRP0 149 aa6.35□□□□□ -1.39
SFSWAP-202ENST00000535202 IGKV3-7A0A075B6H7 116 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 IGHV3OR16-13A0A075B7E8 117 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 IGHV3-74A0A0B4J1X5 117 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 TRAV34A0A0B4J273 112 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 A0A0G2JRQ6 117 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 CHEK1O14757 476 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 NUDT3O95989 172 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 P0C879 139 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 RPL35AP18077 110 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms