RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 C2orf91Q6ZV80 131 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 GTF2H5Q6ZYL4 71 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 SPATA12Q7Z6I5 190 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 MRPL55Q7Z7F7 128 aaKnown RBP2.35□□□□□ -2.03
USP48-215ENST00000534705 TRAPPC6BQ86SZ2 158 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 LRP11Q86VZ4 500 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 LGI3Q8N145 548 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 SLC22A24Q8N4F4 322 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 TMEM252Q8N6L7 170 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 OR51A4Q8NGJ6 313 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 OR10G9Q8NGN4 311 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 OR10X1Q8NGY0 326 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 ARPC1AQ92747 370 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 APOBEC3DQ96AK3 386 aaPredicted RBP2.35□□□□□ -2.03
USP48-215ENST00000534705 KCNS1Q96KK3 526 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 GPER1Q99527 375 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 SMIM7Q9BQ49 75 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 GNB1LQ9BYB4 327 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 WDR61Q9GZS3 305 aaKnown RBP2.35□□□□□ -2.03
USP48-215ENST00000534705 MS4A6AQ9H2W1 248 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 RPRMQ9NS64 109 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 TAAR3PQ9P1P4 343 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 ZNF391Q9UJN7 358 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 TIMM9Q9Y5J7 89 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 TRAPPC1Q9Y5R8 145 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 LY96Q9Y6Y9 160 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 COL6A5A8TX70 2615 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 TENM1Q9UKZ4 2725 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 STAB1Q9NY15 2570 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 ATRQ13535 2644 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 IGLV3-9A0A075B6K5 115 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 IGKV1D-8A0A087WSZ0 117 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.34□□□□□ -2.03
USP48-215ENST00000534705 IGLV1-36A0A0B4J1U3 117 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 MUC21A0A0G2JKD1 596 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 A0A0G2JLM5 398 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 MUC21A0A140T8X8 626 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 KIR2DS1A0A191URI9 304 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 hADV38S2A0JD32 116 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 ZFP92A6NM28 416 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 C12orf77C9JDV5 145 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.34□□□□□ -2.03
USP48-215ENST00000534705 H7C1C5 153 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 K7EMT4 169 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 M0R1X1 148 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 SLC17A3O00476 420 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 DEGS1O15121 323 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 NDUFB2O95178 105 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 GYPAP02724 150 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 GYPBP06028 91 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 FGF6P10767 208 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 SLC25A6P12236 298 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 HIST1H1DP16402 221 aaKnown RBP2.34□□□□□ -2.03
USP48-215ENST00000534705 CTLA4P16410 223 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 CRISP2P16562 243 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 ZNF32P17041 273 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 USF1P22415 310 aaPredicted RBP2.34□□□□□ -2.03
USP48-215ENST00000534705 NPPCP23582 126 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 PFN2P35080 140 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 GLRXP35754 106 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 GNG4P50150 75 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 TAS2R46P59540 309 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 PPP1CBP62140 327 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 PSG4Q00888 419 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 MEF2BQ02080 365 aaPredicted RBP2.34□□□□□ -2.03
USP48-215ENST00000534705 AESQ08117 197 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 SMAGPQ0VAQ4 97 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 PSG7Q13046 419 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 KIR2DS1Q14954 304 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 LTC4SQ16873 150 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 CLEC12BQ2HXU8 276 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 SPRNQ5BIV9 151 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 FAM27BQ5VT28 67 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 SPATA31B1PQ5VZV4 182 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 OTPQ5XKR4 325 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 OR8I2Q8N0Y5 310 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 ZCCHC24Q8N2G6 241 aaKnown RBP2.34□□□□□ -2.03
USP48-215ENST00000534705 TTC9CQ8N5M4 171 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 SIGLECL1Q8N7X8 197 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 OR10P1Q8NGE3 313 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 OR52E2Q8NGJ4 325 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 OR2K2Q8NGT1 345 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 OR4A5Q8NH83 315 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 ATP6V0E2Q8NHE4 81 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 OTOSQ8NHW6 89 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 MRPL30Q8TCC3 161 aaKnown RBP2.34□□□□□ -2.03
USP48-215ENST00000534705 C10orf105Q8TEF2 133 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 CHCHD10Q8WYQ3 142 aaPredicted RBP2.34□□□□□ -2.03
USP48-215ENST00000534705 LSM10Q969L4 123 aaKnown RBP2.34□□□□□ -2.03
USP48-215ENST00000534705 LINC00167Q96N53 147 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 PMCHL2Q9BQD1 86 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 TXNDC17Q9BRA2 123 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 SMIM3Q9BZL3 60 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 GTSF1LQ9H1H1 148 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 CKLFQ9UBR5 152 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 TRAPPC2LQ9UL33 140 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 KLF12Q9Y4X4 402 aa2.34□□□□□ -2.03
USP48-215ENST00000534705 IGLV8-61A0A075B6I0 122 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 IGHV1OR15-1A0A075B7D0 117 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 CENPVL3A0A0U1RRI6 287 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms