RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 K7EMT4 169 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 LGALS9O00182 355 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 COX7A2P2O60397 106 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 STAG3L2P0CL84 134 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 STAG3L3P0CL85 134 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 CRYBB3P26998 211 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 CDC34P49427 236 aaPredicted RBP4.66□□□□□ -1.66
CMTM1-220ENST00000534143 RHOBP62745 196 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 FHL3Q13643 280 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 KLF5Q13887 457 aaPredicted RBP4.66□□□□□ -1.66
CMTM1-220ENST00000534143 DEFB136Q30KP8 78 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 OR10J3Q5JRS4 329 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 C10orf113Q5VZT2 155 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 MIR17HGQ75NE6 70 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 NDUFA11Q86Y39 141 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 KLHL30-AS1Q8NEE0 82 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 OR11H1Q8NG94 326 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 OR1B1Q8NGR6 318 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 OR1N2Q8NGR9 330 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 TMEM190Q8WZ59 177 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 FAM167A-AS1Q96KT0 104 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 UHRF2Q96PU4 802 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 CITED1Q99966 193 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 SHANK2-AS3Q9BTD1 123 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 MRPL32Q9BYC8 188 aaKnown RBP4.66□□□□□ -1.66
CMTM1-220ENST00000534143 SLC25A39Q9BZJ4 359 aaPredicted RBP4.66□□□□□ -1.66
CMTM1-220ENST00000534143 TECRQ9NZ01 308 aaKnown RBP4.66□□□□□ -1.66
CMTM1-220ENST00000534143 FAM30AQ9NZY2 134 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 RPH3ALQ9UNE2 315 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 HIGD1AQ9Y241 93 aa4.66□□□□□ -1.66
CMTM1-220ENST00000534143 NBEAL1Q6ZS30 2694 aa4.65□□□□□ -1.66
CMTM1-220ENST00000534143 IGHV3OR16-8A0A075B7F1 116 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 TRAV5A0A0B4J249 113 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 LINC01619G3V211 115 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 CCL24O00175 119 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 MRPS12O15235 138 aaKnown RBP4.65□□□□□ -1.67
CMTM1-220ENST00000534143 BUB3O43684 328 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 APOHP02749 345 aaPredicted RBP4.65□□□□□ -1.67
CMTM1-220ENST00000534143 C8orf88P0DMB2 117 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 HOXD3P31249 432 aaPredicted RBP4.65□□□□□ -1.67
CMTM1-220ENST00000534143 MYCNOSP40205 109 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 AMTP48728 403 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 Q0VG73 95 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 RPEL1Q2QD12 228 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 FAM106AQ4KMX7 169 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 KHDC1LQ5JSQ8 128 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 C12orf54Q6X4T0 127 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 LINC00305Q7Z4B0 112 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 NIT1Q86X76 327 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 MTURNQ8N3F0 131 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 OR10G8Q8NGN5 311 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 RNASE8Q8TDE3 154 aaKnown RBP4.65□□□□□ -1.67
CMTM1-220ENST00000534143 DPF1Q92782 380 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 KCNS1Q96KK3 526 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 DUX3Q96PT4 197 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 SLC25A2Q9BXI2 301 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 CSTL1Q9H114 145 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 SLC25A22Q9H936 323 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 RABAC1Q9UI14 185 aa4.65□□□□□ -1.67
CMTM1-220ENST00000534143 TRRAPQ9Y4A5 3859 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 A0A1B0GV72 72 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 TMEM213A2RRL7 107 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 C11orf94C9JXX5 98 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 J3QR89 54 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 CCL25O15444 150 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 ZNF207O43670 478 aaKnown RBP4.64□□□□□ -1.67
CMTM1-220ENST00000534143 CXorf1O96002 111 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 SCGB1A1P11684 91 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 NPPCP23582 126 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 TFPI2P48307 235 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 FGF8P55075 233 aaPredicted RBP4.64□□□□□ -1.67
CMTM1-220ENST00000534143 SYNJ2BPP57105 145 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 TAS2R45P59539 299 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 NSUN5P1Q3KNT7 163 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 OCIAD2Q56VL3 154 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 C16orf54Q6UWD8 224 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 PQLC2Q6ZP29 291 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 S100A7AQ86SG5 101 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 ZNF575Q86XF7 245 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 GLMPQ8WWB7 406 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 DLX4Q92988 240 aaPredicted RBP4.64□□□□□ -1.67
CMTM1-220ENST00000534143 SFRP2Q96HF1 295 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 METTL26Q96S19 204 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 PMCHL2Q9BQD1 86 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 CST9LQ9H4G1 147 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 IL36BQ9NZH7 164 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 TMEM14CQ9P0S9 112 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 SMPXQ9UHP9 88 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 UFC1Q9Y3C8 167 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 TENM1Q9UKZ4 2725 aa4.64□□□□□ -1.67
CMTM1-220ENST00000534143 IGHV3-49A0A0A0MS15 119 aa4.63□□□□□ -1.67
CMTM1-220ENST00000534143 IGHV7-4-1A0A0J9YVY3 117 aa4.63□□□□□ -1.67
CMTM1-220ENST00000534143 C2orf70A6NJV1 201 aa4.63□□□□□ -1.67
CMTM1-220ENST00000534143 TMEM238C9JI98 176 aa4.63□□□□□ -1.67
CMTM1-220ENST00000534143 CHEK1O14757 476 aa4.63□□□□□ -1.67
CMTM1-220ENST00000534143 SERF1AO75920 110 aa4.63□□□□□ -1.67
CMTM1-220ENST00000534143 HLA-DQA1P01909 254 aa4.63□□□□□ -1.67
CMTM1-220ENST00000534143 CSN3P07498 182 aa4.63□□□□□ -1.67
CMTM1-220ENST00000534143 ARL14EPLP0DKL9 152 aa4.63□□□□□ -1.67
CMTM1-220ENST00000534143 IGLC2P0DOY2 106 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms