RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 ODF3Q96PU9 254 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 ALMS1Q8TCU4 4167 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 TRAV34A0A0B4J273 112 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 FAM74A7A6NL05 159 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 H7BYZ3 331 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 H2AFB1P0C5Y9 115 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 RNASE4P34096 147 aaKnown RBP8.73□□□□□ -1.01
SF3B2-213ENST00000533421 SULT1A2P50226 295 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 CST9LP1Q5W188 147 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 C9orf47Q6ZRZ4 202 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 ZNF767PQ75MW2 155 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 CCDC28AQ8IWP9 274 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 MBD3L1Q8WWY6 194 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 LINC00479Q96M42 142 aa8.73□□□□□ -1.01
SF3B2-213ENST00000533421 F6UZH7 168 aa8.72□□□□□ -1.01
SF3B2-213ENST00000533421 PAGE4O60829 102 aa8.72□□□□□ -1.01
SF3B2-213ENST00000533421 IFNA7P01567 189 aa8.72□□□□□ -1.01
SF3B2-213ENST00000533421 AZU1P20160 251 aa8.72□□□□□ -1.01
SF3B2-213ENST00000533421 ZNF138P52744 262 aa8.72□□□□□ -1.01
SF3B2-213ENST00000533421 TVP23CQ96ET8 276 aa8.72□□□□□ -1.01
SF3B2-213ENST00000533421 FAM19A4Q96LR4 140 aa8.72□□□□□ -1.01
SF3B2-213ENST00000533421 ZNF492Q9P255 531 aa8.72□□□□□ -1.01
SF3B2-213ENST00000533421 TCRAP04437 139 aa8.71□□□□□ -1.02
SF3B2-213ENST00000533421 HTN3P15516 51 aa8.71□□□□□ -1.02
SF3B2-213ENST00000533421 DPPA3Q6W0C5 159 aa8.71□□□□□ -1.02
SF3B2-213ENST00000533421 ZFAND2AQ8N6M9 145 aa8.71□□□□□ -1.02
SF3B2-213ENST00000533421 C5orf17Q8NAS9 161 aa8.71□□□□□ -1.02
SF3B2-213ENST00000533421 RXFP4Q8TDU9 374 aa8.71□□□□□ -1.02
SF3B2-213ENST00000533421 PCNPQ8WW12 178 aaKnown RBP8.71□□□□□ -1.02
SF3B2-213ENST00000533421 LINC00477Q96M19 166 aa8.71□□□□□ -1.02
SF3B2-213ENST00000533421 GNG13Q9P2W3 67 aa8.71□□□□□ -1.02
SF3B2-213ENST00000533421 EPDR1Q9UM22 224 aa8.71□□□□□ -1.02
SF3B2-213ENST00000533421 TIMM8BQ9Y5J9 83 aaPredicted RBP8.71□□□□□ -1.02
SF3B2-213ENST00000533421 A0A1W2PRE2 83 aa8.7□□□□□ -1.02
SF3B2-213ENST00000533421 C7orf71A4D174 169 aa8.7□□□□□ -1.02
SF3B2-213ENST00000533421 GPX1P07203 203 aa8.7□□□□□ -1.02
SF3B2-213ENST00000533421 EIF5AL1Q6IS14 154 aaKnown RBP8.7□□□□□ -1.02
SF3B2-213ENST00000533421 PRNTQ86SH4 94 aa8.7□□□□□ -1.02
SF3B2-213ENST00000533421 C15orf53Q8NAA6 179 aa8.7□□□□□ -1.02
SF3B2-213ENST00000533421 TMEM263Q8WUH6 116 aaKnown RBP8.7□□□□□ -1.02
SF3B2-213ENST00000533421 C8orf49Q96NF6 230 aa8.7□□□□□ -1.02
SF3B2-213ENST00000533421 RBAKDNA6NC62 111 aa8.69□□□□□ -1.02
SF3B2-213ENST00000533421 PEX7O00628 323 aa8.69□□□□□ -1.02
SF3B2-213ENST00000533421 IGLV2-11P01706 119 aa8.69□□□□□ -1.02
SF3B2-213ENST00000533421 MUC21Q5SSG8 566 aa8.69□□□□□ -1.02
SF3B2-213ENST00000533421 UBE2DNLQ8IWF7 75 aa8.69□□□□□ -1.02
SF3B2-213ENST00000533421 PYGO2Q9BRQ0 406 aa8.69□□□□□ -1.02
SF3B2-213ENST00000533421 SCO2A0A1W2PP80 73 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 SNURFLB1AK76 121 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 KLLNB2CW77 178 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 ATP5G1P05496 136 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 NMBP08949 121 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 DEFB130BP0DP73 79 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 DEFB130AP0DP74 79 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 CRISP2P16562 243 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 RAB5CP51148 216 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 POM121L12Q8N7R1 296 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 CYB561D1Q8N8Q1 229 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 ATG101Q9BSB4 218 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 TP53TG3Q9ULZ0 132 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 PSG8Q9UQ74 426 aa8.68□□□□□ -1.02
SF3B2-213ENST00000533421 CBY3A6NI87 242 aa8.67□□□□□ -1.02
SF3B2-213ENST00000533421 TEX46H3BTG2 121 aa8.67□□□□□ -1.02
SF3B2-213ENST00000533421 ZNF324O75467 553 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-213ENST00000533421 ZNF80P51504 273 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-213ENST00000533421 FLI1Q01543 452 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-213ENST00000533421 RNASE8Q8TDE3 154 aaKnown RBP8.67□□□□□ -1.02
SF3B2-213ENST00000533421 TREM1Q9NP99 234 aa8.67□□□□□ -1.02
SF3B2-213ENST00000533421 NAGKQ9UJ70 344 aa8.67□□□□□ -1.02
SF3B2-213ENST00000533421 TRBV7-9A0A0J9YWB2 115 aa8.66□□□□□ -1.02
SF3B2-213ENST00000533421 PLAC8L1A1L4L8 177 aa8.66□□□□□ -1.02
SF3B2-213ENST00000533421 RNF212Q495C1 297 aa8.66□□□□□ -1.02
SF3B2-213ENST00000533421 Q86TA4 180 aa8.66□□□□□ -1.02
SF3B2-213ENST00000533421 NHLRC2Q8NBF2 726 aa8.66□□□□□ -1.02
SF3B2-213ENST00000533421 ZNF680Q8NEM1 530 aa8.66□□□□□ -1.02
SF3B2-213ENST00000533421 TRAV1-1A0A0B4J248 108 aa8.65□□□□□ -1.02
SF3B2-213ENST00000533421 F5H768 121 aa8.65□□□□□ -1.02
SF3B2-213ENST00000533421 K7EQM0 130 aa8.65□□□□□ -1.02
SF3B2-213ENST00000533421 AKR1C3P42330 323 aa8.65□□□□□ -1.02
SF3B2-213ENST00000533421 FAM3BP58499 235 aaPredicted RBP8.65□□□□□ -1.02
SF3B2-213ENST00000533421 TMEM75Q8N9X5 138 aa8.65□□□□□ -1.02
SF3B2-213ENST00000533421 NOP10Q9NPE3 64 aaKnown RBP8.65□□□□□ -1.02
SF3B2-213ENST00000533421 ARL2-SNX15V9GYD0 113 aa8.65□□□□□ -1.02
SF3B2-213ENST00000533421 RGS13O14921 159 aa8.64□□□□□ -1.03
SF3B2-213ENST00000533421 GCGP01275 180 aa8.64□□□□□ -1.03
SF3B2-213ENST00000533421 TMEM88Q6PEY1 159 aa8.64□□□□□ -1.03
SF3B2-213ENST00000533421 ARL6IP6Q8N6S5 226 aa8.64□□□□□ -1.03
SF3B2-213ENST00000533421 LINC00467Q9BRT7 94 aa8.64□□□□□ -1.03
SF3B2-213ENST00000533421 DERL1Q9BUN8 251 aa8.64□□□□□ -1.03
SF3B2-213ENST00000533421 MANBALQ9NQG1 85 aa8.64□□□□□ -1.03
SF3B2-213ENST00000533421 C11orf21Q9P2W6 132 aa8.64□□□□□ -1.03
SF3B2-213ENST00000533421 IGHV1OR15-1A0A075B7D0 117 aa8.63□□□□□ -1.03
SF3B2-213ENST00000533421 SERTM2A0A1B0GWG4 89 aa8.63□□□□□ -1.03
SF3B2-213ENST00000533421 UBE2G1P62253 170 aa8.63□□□□□ -1.03
SF3B2-213ENST00000533421 EIF4E3Q8N5X7 224 aaKnown RBP8.63□□□□□ -1.03
SF3B2-213ENST00000533421 HIST1H2BAQ96A08 127 aa8.63□□□□□ -1.03
SF3B2-213ENST00000533421 NDFIP1Q9BT67 221 aa8.63□□□□□ -1.03
SF3B2-213ENST00000533421 NKX6-2Q9C056 277 aaPredicted RBP8.63□□□□□ -1.03
SF3B2-213ENST00000533421 GSN-AS1Q9NRJ2 163 aa8.63□□□□□ -1.03
SF3B2-213ENST00000533421 KLF12Q9Y4X4 402 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms