RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 MAP1LC3B2A6NCE7 125 aa14.47□□□□□ -0.09
CCS-208ENST00000533244 LY6G6CO95867 125 aa14.47□□□□□ -0.09
CCS-208ENST00000533244 SUMO1P63165 101 aaKnown RBP14.47□□□□□ -0.09
CCS-208ENST00000533244 Q6AWC8 147 aa14.47□□□□□ -0.09
CCS-208ENST00000533244 EIF4E3Q8N5X7 224 aaKnown RBP14.47□□□□□ -0.09
CCS-208ENST00000533244 MAP1LC3BQ9GZQ8 125 aa14.47□□□□□ -0.09
CCS-208ENST00000533244 TRAV8-1A0A0A6YYK1 113 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 UMAD1C9J7I0 102 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 C1QBP02746 253 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 DEFB130BP0DP73 79 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 DEFB130AP0DP74 79 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 FHITP49789 147 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 FGF8P55075 233 aaPredicted RBP14.46□□□□□ -0.09
CCS-208ENST00000533244 EIF5AP63241 154 aaKnown RBP14.46□□□□□ -0.09
CCS-208ENST00000533244 IQCF2Q8IXL9 164 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 ZNF680Q8NEM1 530 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 STOML3Q8TAV4 291 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 TVP23CQ96ET8 276 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 EPDR1Q9UM22 224 aa14.46□□□□□ -0.09
CCS-208ENST00000533244 IGHV1OR15-1A0A075B7D0 117 aa14.45□□□□□ -0.1
CCS-208ENST00000533244 PFDN1O60925 122 aa14.45□□□□□ -0.1
CCS-208ENST00000533244 DAZ2Q13117 558 aaKnown RBP14.45□□□□□ -0.1
CCS-208ENST00000533244 LGALSLQ3ZCW2 172 aaPredicted RBP14.45□□□□□ -0.1
CCS-208ENST00000533244 CBY3A6NI87 242 aa14.44□□□□□ -0.1
CCS-208ENST00000533244 SNURFLB1AK76 121 aa14.44□□□□□ -0.1
CCS-208ENST00000533244 IBA57Q5T440 356 aaKnown RBP14.44□□□□□ -0.1
CCS-208ENST00000533244 NDUFAF3Q9BU61 184 aa14.44□□□□□ -0.1
CCS-208ENST00000533244 KMT2AQ03164 3969 aa14.44□□□□□ -0.1
CCS-208ENST00000533244 FAM74A7A6NL05 159 aa14.43□□□□□ -0.1
CCS-208ENST00000533244 RGS13O14921 159 aa14.43□□□□□ -0.1
CCS-208ENST00000533244 IGLV2-11P01706 119 aa14.43□□□□□ -0.1
CCS-208ENST00000533244 TPT1P13693 172 aaKnown RBP14.43□□□□□ -0.1
CCS-208ENST00000533244 HTN3P15516 51 aa14.43□□□□□ -0.1
CCS-208ENST00000533244 CYB561D1Q8N8Q1 229 aa14.43□□□□□ -0.1
CCS-208ENST00000533244 MBD3L1Q8WWY6 194 aa14.43□□□□□ -0.1
CCS-208ENST00000533244 ATG101Q9BSB4 218 aa14.43□□□□□ -0.1
CCS-208ENST00000533244 GSN-AS1Q9NRJ2 163 aa14.43□□□□□ -0.1
CCS-208ENST00000533244 hCG_2014768A0A024R1R8 64 aa14.42□□□□□ -0.1
CCS-208ENST00000533244 DPPA3Q6W0C5 159 aa14.42□□□□□ -0.1
CCS-208ENST00000533244 AKAP14Q86UN6 197 aa14.42□□□□□ -0.1
CCS-208ENST00000533244 NKX6-2Q9C056 277 aaPredicted RBP14.42□□□□□ -0.1
CCS-208ENST00000533244 TP53TG3Q9ULZ0 132 aa14.42□□□□□ -0.1
CCS-208ENST00000533244 K7EQM0 130 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 ATP5G1P05496 136 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 ATP5G3P48201 142 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 TCL1AP56279 114 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 UBE2G2P60604 165 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 TMEM75Q8N9X5 138 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 TREM1Q9NP99 234 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 PSG8Q9UQ74 426 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 FBLL1A6NHQ2 334 aaKnown RBP14.41□□□□□ -0.1
CCS-208ENST00000533244 FAM213BQ8TBF2 198 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 SGK494Q96LW2 274 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 ARL2-SNX15V9GYD0 113 aa14.41□□□□□ -0.1
CCS-208ENST00000533244 F6UZH7 168 aa14.4□□□□□ -0.1
CCS-208ENST00000533244 FLI1Q01543 452 aaPredicted RBP14.4□□□□□ -0.1
CCS-208ENST00000533244 TDRG1Q3Y452 100 aa14.4□□□□□ -0.1
CCS-208ENST00000533244 TMEM88Q6PEY1 159 aa14.4□□□□□ -0.1
CCS-208ENST00000533244 NDFIP1Q9BT67 221 aa14.4□□□□□ -0.1
CCS-208ENST00000533244 KLF12Q9Y4X4 402 aa14.4□□□□□ -0.1
CCS-208ENST00000533244 DNAH6Q9C0G6 4158 aa14.39□□□□□ -0.11
CCS-208ENST00000533244 GAGE12BA1L429 117 aa14.39□□□□□ -0.11
CCS-208ENST00000533244 GAGE7O76087 117 aa14.39□□□□□ -0.11
CCS-208ENST00000533244 GAGE12FP0CL80 117 aa14.39□□□□□ -0.11
CCS-208ENST00000533244 GAGE12GP0CL81 117 aa14.39□□□□□ -0.11
CCS-208ENST00000533244 GAGE12IP0CL82 117 aa14.39□□□□□ -0.11
CCS-208ENST00000533244 MUC21Q5SSG8 566 aa14.39□□□□□ -0.11
CCS-208ENST00000533244 Q6ZTI0 123 aa14.39□□□□□ -0.11
CCS-208ENST00000533244 C18orf15Q96N68 181 aa14.39□□□□□ -0.11
CCS-208ENST00000533244 TRAV21A0A0B4J279 112 aa14.38□□□□□ -0.11
CCS-208ENST00000533244 PEX7O00628 323 aa14.38□□□□□ -0.11
CCS-208ENST00000533244 SPINK4O60575 86 aa14.38□□□□□ -0.11
CCS-208ENST00000533244 SFT2D1Q8WV19 159 aa14.38□□□□□ -0.11
CCS-208ENST00000533244 HIST1H2BAQ96A08 127 aa14.38□□□□□ -0.11
CCS-208ENST00000533244 IFNA7P01567 189 aa14.37□□□□□ -0.11
CCS-208ENST00000533244 ZNF415Q09FC8 603 aa14.37□□□□□ -0.11
CCS-208ENST00000533244 FAM159AQ6UWV7 190 aa14.37□□□□□ -0.11
CCS-208ENST00000533244 LINC00479Q96M42 142 aa14.37□□□□□ -0.11
CCS-208ENST00000533244 C8orf49Q96NF6 230 aa14.37□□□□□ -0.11
CCS-208ENST00000533244 TCEAL7Q9BRU2 100 aa14.37□□□□□ -0.11
CCS-208ENST00000533244 F5H768 121 aa14.36□□□□□ -0.11
CCS-208ENST00000533244 ZNF80P51504 273 aaPredicted RBP14.36□□□□□ -0.11
CCS-208ENST00000533244 PRNTQ86SH4 94 aa14.36□□□□□ -0.11
CCS-208ENST00000533244 SLC51BQ86UW2 128 aa14.36□□□□□ -0.11
CCS-208ENST00000533244 C9orf62Q8N4C0 152 aa14.36□□□□□ -0.11
CCS-208ENST00000533244 A0A1B0GVG6 124 aa14.35□□□□□ -0.11
CCS-208ENST00000533244 H2AFB1P0C5Y9 115 aa14.35□□□□□ -0.11
CCS-208ENST00000533244 LGALS9BQ3B8N2 356 aa14.35□□□□□ -0.11
CCS-208ENST00000533244 SAPCD1Q5SSQ6 148 aa14.35□□□□□ -0.11
CCS-208ENST00000533244 EIF5AL1Q6IS14 154 aaKnown RBP14.35□□□□□ -0.11
CCS-208ENST00000533244 C15orf53Q8NAA6 179 aa14.35□□□□□ -0.11
CCS-208ENST00000533244 MDFICQ9P1T7 246 aa14.35□□□□□ -0.11
CCS-208ENST00000533244 TRGV11A0A075B6L2 103 aa14.34□□□□□ -0.11
CCS-208ENST00000533244 TRGV1A0A0A0MS02 117 aa14.34□□□□□ -0.11
CCS-208ENST00000533244 TRAV34A0A0B4J273 112 aa14.34□□□□□ -0.11
CCS-208ENST00000533244 P0DMU3 169 aa14.34□□□□□ -0.11
CCS-208ENST00000533244 FAM231AP0DMU4 169 aa14.34□□□□□ -0.11
CCS-208ENST00000533244 FAM231CP0DMU5 169 aa14.34□□□□□ -0.11
CCS-208ENST00000533244 RAB5CP51148 216 aa14.34□□□□□ -0.11
CCS-208ENST00000533244 TMEM183BQ1AE95 376 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms