RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 KLF12Q9Y4X4 402 aa8.23□□□□□ -1.09
TRAPPC4-213ENST00000533149 TRAV2A0A0B4J234 112 aa8.22□□□□□ -1.09
TRAPPC4-213ENST00000533149 TMEM183BQ1AE95 376 aa8.22□□□□□ -1.09
TRAPPC4-213ENST00000533149 FAM24BQ8N5W8 94 aa8.22□□□□□ -1.09
TRAPPC4-213ENST00000533149 ZNF738Q8NE65 137 aa8.22□□□□□ -1.09
TRAPPC4-213ENST00000533149 TVP23CQ96ET8 276 aa8.22□□□□□ -1.09
TRAPPC4-213ENST00000533149 NIPSNAP3BQ9BS92 247 aa8.22□□□□□ -1.09
TRAPPC4-213ENST00000533149 SDF2L1Q9HCN8 221 aa8.22□□□□□ -1.09
TRAPPC4-213ENST00000533149 NAT8Q9UHE5 227 aa8.22□□□□□ -1.09
TRAPPC4-213ENST00000533149 TRBV20OR9-2A0A075B6H5 130 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 IGKV2-40A0A087WW87 121 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 TRAV8-1A0A0A6YYK1 113 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 SERTM2A0A1B0GWG4 89 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 K7EQM0 130 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 IGKV2D-40P01614 121 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 IGLV2-11P01706 119 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 UBE2G1P62253 170 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 BAGE2Q86Y30 109 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 Q8N1X5 172 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 OCC1Q8TAD7 63 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 FMC1Q96HJ9 113 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 MAP6D1Q9H9H5 199 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 PSG8Q9UQ74 426 aa8.21□□□□□ -1.1
TRAPPC4-213ENST00000533149 TRBV6-1A0A0K0K1D8 114 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 PGPEP1LA6NFU8 196 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 C9JCJ5 164 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 ZNF688P0C7X2 276 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 GNG4P50150 75 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 DEFB1P60022 68 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 SNRPD3P62318 126 aaKnown RBP8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 FLI1Q01543 452 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 ERCC8Q13216 396 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 LGALS9BQ3B8N2 356 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 CENPWQ5EE01 88 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 PSMG4Q5JS54 123 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 PRNTQ86SH4 94 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 POM121L12Q8N7R1 296 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 IGF2BP2-AS1Q96M15 143 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 SPAG8Q99932 426 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 VGLL1Q99990 258 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 AGPAT4-IT1Q9H0P7 198 aa8.2□□□□□ -1.1
TRAPPC4-213ENST00000533149 FAT2Q9NYQ8 4349 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 RBAKDNA6NC62 111 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 OR4C46A6NHA9 309 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 F6UB75 175 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 M0R036 132 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 M0R2N4 97 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 IGLV2-8P01709 118 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 ZNF705DP0CH99 300 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 ZNF705BP0CI00 300 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 RPL35AP18077 110 aaKnown RBP8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 SVBPQ8N300 66 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 TMEM75Q8N9X5 138 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 CLRN3Q8NCR9 226 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 LY96Q9Y6Y9 160 aa8.19□□□□□ -1.1
TRAPPC4-213ENST00000533149 DNAH6Q9C0G6 4158 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 FBLL1A6NHQ2 334 aaKnown RBP8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 SNAPINO95295 136 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 LTAP01374 205 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 P0DMU3 169 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 FAM231AP0DMU4 169 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 FAM231CP0DMU5 169 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 DEFB131AP59861 70 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 PNRC1Q12796 327 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 ADIRFQ15847 76 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 ATRAIDQ6UW56 229 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 C9orf47Q6ZRZ4 202 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 Q86TA4 180 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 LINC01551Q86U37 167 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 OR8A1Q8NGG7 326 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 OR10J6PQ8NGY7 276 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 OR11H2Q8NH07 326 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 DNAH11Q96DT5 4516 aa8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 DYNC1H1Q14204 4646 aaKnown RBP8.18□□□□□ -1.1
TRAPPC4-213ENST00000533149 DNAH2Q9P225 4427 aa8.17□□□□□ -1.1
TRAPPC4-213ENST00000533149 IGHV4-4A0A075B6R2 117 aa8.17□□□□□ -1.1
TRAPPC4-213ENST00000533149 C16orf90A8MZG2 172 aa8.17□□□□□ -1.1
TRAPPC4-213ENST00000533149 ZNF138P52744 262 aa8.17□□□□□ -1.1
TRAPPC4-213ENST00000533149 HIST1H1AQ02539 215 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC4-213ENST00000533149 TMEM78Q5T7P6 136 aa8.17□□□□□ -1.1
TRAPPC4-213ENST00000533149 NHLRC2Q8NBF2 726 aa8.17□□□□□ -1.1
TRAPPC4-213ENST00000533149 LINC00477Q96M19 166 aa8.17□□□□□ -1.1
TRAPPC4-213ENST00000533149 CSTL1Q9H114 145 aa8.17□□□□□ -1.1
TRAPPC4-213ENST00000533149 ZFP30Q9Y2G7 519 aa8.17□□□□□ -1.1
TRAPPC4-213ENST00000533149 C7orf77A4D0Y5 90 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 NPIPB6E9PJ23 425 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 K7EN84 100 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 GCGP01275 180 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 CT45A10P0DMU9 189 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 MGST1P10620 155 aaKnown RBP8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 CMC4P56277 68 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 OR5I1Q13606 314 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 SAPCD1Q5SSQ6 148 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 EBLN2Q6P2I7 272 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 TMEM183AQ8IXX5 376 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 Q8TAT8 98 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 MLST8Q9BVC4 326 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 SCRT2Q9NQ03 307 aa8.16□□□□□ -1.1
TRAPPC4-213ENST00000533149 ZNF492Q9P255 531 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms