RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 SLC25A5P05141 298 aaKnown RBP11.94□□□□□ -0.5
PKP3-209ENST00000533069 RRN3P1Q2M238 152 aa11.94□□□□□ -0.5
PKP3-209ENST00000533069 C12orf74Q32Q52 190 aa11.94□□□□□ -0.5
PKP3-209ENST00000533069 FAM74A3Q4VXF1 159 aa11.94□□□□□ -0.5
PKP3-209ENST00000533069 TREM1Q9NP99 234 aa11.94□□□□□ -0.5
PKP3-209ENST00000533069 PPP1R14DQ9NXH3 145 aa11.94□□□□□ -0.5
PKP3-209ENST00000533069 EPDR1Q9UM22 224 aa11.94□□□□□ -0.5
PKP3-209ENST00000533069 RBAKDNA6NC62 111 aa11.93□□□□□ -0.5
PKP3-209ENST00000533069 M0R2Z0 102 aa11.93□□□□□ -0.5
PKP3-209ENST00000533069 ATP5G3P48201 142 aa11.93□□□□□ -0.5
PKP3-209ENST00000533069 EMP1P54849 157 aa11.93□□□□□ -0.5
PKP3-209ENST00000533069 DEFB131BA0A096LNP1 70 aa11.92□□□□□ -0.5
PKP3-209ENST00000533069 H3BTX0 84 aa11.92□□□□□ -0.5
PKP3-209ENST00000533069 PEX7O00628 323 aa11.92□□□□□ -0.5
PKP3-209ENST00000533069 CRXO43186 299 aaPredicted RBP11.92□□□□□ -0.5
PKP3-209ENST00000533069 SRP19P09132 144 aaKnown RBP11.92□□□□□ -0.5
PKP3-209ENST00000533069 SNRPCP09234 159 aaKnown RBP11.92□□□□□ -0.5
PKP3-209ENST00000533069 EXOC3-AS1Q8N2X6 119 aa11.92□□□□□ -0.5
PKP3-209ENST00000533069 CYB561D1Q8N8Q1 229 aa11.92□□□□□ -0.5
PKP3-209ENST00000533069 DKK2Q9UBU2 259 aa11.92□□□□□ -0.5
PKP3-209ENST00000533069 APLNQ9ULZ1 77 aa11.92□□□□□ -0.5
PKP3-209ENST00000533069 TCRAP04437 139 aa11.91□□□□□ -0.5
PKP3-209ENST00000533069 TMEM256Q8N2U0 113 aa11.91□□□□□ -0.5
PKP3-209ENST00000533069 OR10J6PQ8NGY7 276 aa11.91□□□□□ -0.5
PKP3-209ENST00000533069 FMC1Q96HJ9 113 aa11.91□□□□□ -0.5
PKP3-209ENST00000533069 IGHV4-4A0A075B6R2 117 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 KRBOX1C9JBD0 128 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 DIRC3C9JPN6 131 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 TSPOP30536 169 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 AKR1C3P42330 323 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 CDKN1BP46527 198 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 TAS2R60P59551 318 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 SOHLH1Q5JUK2 328 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 FAM222AQ5U5X8 452 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 TMEM75Q8N9X5 138 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 SMIM12Q96EX1 92 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 KLF12Q9Y4X4 402 aa11.9□□□□□ -0.5
PKP3-209ENST00000533069 TRAV12-2A0A075B6T6 113 aa11.89□□□□□ -0.51
PKP3-209ENST00000533069 TRBV6-1A0A0K0K1D8 114 aa11.89□□□□□ -0.51
PKP3-209ENST00000533069 TMEM218A2RU14 115 aa11.89□□□□□ -0.51
PKP3-209ENST00000533069 UBE2G1P62253 170 aa11.89□□□□□ -0.51
PKP3-209ENST00000533069 NIPSNAP3BQ9BS92 247 aa11.89□□□□□ -0.51
PKP3-209ENST00000533069 SCO2A0A1W2PP80 73 aa11.88□□□□□ -0.51
PKP3-209ENST00000533069 M0R3E3 92 aa11.88□□□□□ -0.51
PKP3-209ENST00000533069 SFTA3P0C7M3 94 aa11.88□□□□□ -0.51
PKP3-209ENST00000533069 C20orf144Q9BQM9 153 aa11.88□□□□□ -0.51
PKP3-209ENST00000533069 SEC11CQ9BY50 192 aa11.88□□□□□ -0.51
PKP3-209ENST00000533069 LENEPQ9Y5L5 61 aa11.88□□□□□ -0.51
PKP3-209ENST00000533069 TRBV7-9A0A0J9YWB2 115 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 C9JCJ5 164 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 PRAC2D3DTV9 90 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
PKP3-209ENST00000533069 TMEM183BQ1AE95 376 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 TMEM78Q5T7P6 136 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 FAM210BQ96KR6 192 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 LINC00477Q96M19 166 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 ODF3Q96PU9 254 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 LINC01587Q99440 93 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 NDUFAF3Q9BU61 184 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 LY96Q9Y6Y9 160 aa11.87□□□□□ -0.51
PKP3-209ENST00000533069 LYRM9A8MSI8 78 aa11.86□□□□□ -0.51
PKP3-209ENST00000533069 ZNF705GA8MUZ8 300 aaPredicted RBP11.86□□□□□ -0.51
PKP3-209ENST00000533069 NPIPB6E9PJ23 425 aa11.86□□□□□ -0.51
PKP3-209ENST00000533069 SAPCD1Q5SSQ6 148 aa11.86□□□□□ -0.51
PKP3-209ENST00000533069 C9orf47Q6ZRZ4 202 aa11.86□□□□□ -0.51
PKP3-209ENST00000533069 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
PKP3-209ENST00000533069 NDFIP1Q9BT67 221 aa11.86□□□□□ -0.51
PKP3-209ENST00000533069 PARLQ9H300 379 aa11.86□□□□□ -0.51
PKP3-209ENST00000533069 BIN3Q9NQY0 253 aa11.86□□□□□ -0.51
PKP3-209ENST00000533069 RPH3ALQ9UNE2 315 aa11.86□□□□□ -0.51
PKP3-209ENST00000533069 ZFP30Q9Y2G7 519 aa11.86□□□□□ -0.51
PKP3-209ENST00000533069 EPPK1P58107 5090 aaKnown RBP11.85□□□□□ -0.51
PKP3-209ENST00000533069 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
PKP3-209ENST00000533069 H7BYZ3 331 aa11.85□□□□□ -0.51
PKP3-209ENST00000533069 PRB4P10163 310 aaPredicted RBP11.85□□□□□ -0.51
PKP3-209ENST00000533069 RPL35P42766 123 aaKnown RBP11.85□□□□□ -0.51
PKP3-209ENST00000533069 DAD1P61803 113 aa11.85□□□□□ -0.51
PKP3-209ENST00000533069 GNG5P63218 68 aa11.85□□□□□ -0.51
PKP3-209ENST00000533069 FLI1Q01543 452 aaPredicted RBP11.85□□□□□ -0.51
PKP3-209ENST00000533069 SLC7A5P1Q8MH63 180 aa11.85□□□□□ -0.51
PKP3-209ENST00000533069 C9JQL5 133 aa11.84□□□□□ -0.51
PKP3-209ENST00000533069 F8W036 122 aa11.84□□□□□ -0.51
PKP3-209ENST00000533069 LEPP41159 167 aa11.84□□□□□ -0.51
PKP3-209ENST00000533069 GNG4P50150 75 aa11.84□□□□□ -0.51
PKP3-209ENST00000533069 CEBPGP53567 150 aa11.84□□□□□ -0.51
PKP3-209ENST00000533069 PNRC1Q12796 327 aaPredicted RBP11.84□□□□□ -0.51
PKP3-209ENST00000533069 C16orf74Q96GX8 76 aa11.84□□□□□ -0.51
PKP3-209ENST00000533069 ZNF138P52744 262 aa11.83□□□□□ -0.52
PKP3-209ENST00000533069 TMEM241Q24JQ0 296 aa11.83□□□□□ -0.52
PKP3-209ENST00000533069 C10orf91Q5T1B1 145 aa11.83□□□□□ -0.52
PKP3-209ENST00000533069 GFI1BQ5VTD9 330 aa11.83□□□□□ -0.52
PKP3-209ENST00000533069 ZNF493Q6ZR52 646 aa11.83□□□□□ -0.52
PKP3-209ENST00000533069 NAT8Q9UHE5 227 aa11.83□□□□□ -0.52
PKP3-209ENST00000533069 PSG8Q9UQ74 426 aa11.83□□□□□ -0.52
PKP3-209ENST00000533069 CARHSP1Q9Y2V2 147 aaKnown RBP11.83□□□□□ -0.52
PKP3-209ENST00000533069 PLAC8L1A1L4L8 177 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 LTAP01374 205 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 PRM2P04554 102 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 P0DMU3 169 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms