RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CDC34P49427 236 aaPredicted RBP10.9□□□□□ -0.66
CPSF1-210ENST00000532935 CCDC28AQ8IWP9 274 aa10.9□□□□□ -0.66
CPSF1-210ENST00000532935 FAM213BQ8TBF2 198 aa10.9□□□□□ -0.66
CPSF1-210ENST00000532935 MBD3L1Q8WWY6 194 aa10.9□□□□□ -0.66
CPSF1-210ENST00000532935 NDUFAF3Q9BU61 184 aa10.9□□□□□ -0.66
CPSF1-210ENST00000532935 ZNF492Q9P255 531 aa10.9□□□□□ -0.66
CPSF1-210ENST00000532935 TIMM8BQ9Y5J9 83 aaPredicted RBP10.9□□□□□ -0.66
CPSF1-210ENST00000532935 DNAH10Q8IVF4 4471 aa10.9□□□□□ -0.67
CPSF1-210ENST00000532935 RBAKDNA6NC62 111 aa10.89□□□□□ -0.67
CPSF1-210ENST00000532935 H2AFB1P0C5Y9 115 aa10.89□□□□□ -0.67
CPSF1-210ENST00000532935 DEFB130BP0DP73 79 aa10.89□□□□□ -0.67
CPSF1-210ENST00000532935 DEFB130AP0DP74 79 aa10.89□□□□□ -0.67
CPSF1-210ENST00000532935 BTN1A1Q13410 526 aa10.89□□□□□ -0.67
CPSF1-210ENST00000532935 FAM210BQ96KR6 192 aa10.89□□□□□ -0.67
CPSF1-210ENST00000532935 PYGO2Q9BRQ0 406 aa10.89□□□□□ -0.67
CPSF1-210ENST00000532935 OTORQ9NRC9 128 aa10.89□□□□□ -0.67
CPSF1-210ENST00000532935 FRAS1Q86XX4 4008 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 PGPA6NDG6 321 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 ZNF324O75467 553 aaPredicted RBP10.88□□□□□ -0.67
CPSF1-210ENST00000532935 GPX1P07203 203 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 STAG3L2P0CL84 134 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 STAG3L3P0CL85 134 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 ARL14EPLP0DKL9 152 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 RNASE4P34096 147 aaKnown RBP10.88□□□□□ -0.67
CPSF1-210ENST00000532935 ZNF138P52744 262 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 Q8TAT8 98 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 RXFP4Q8TDU9 374 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 RAB24Q969Q5 203 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 FAM210AQ96ND0 272 aa10.88□□□□□ -0.67
CPSF1-210ENST00000532935 NOP10Q9NPE3 64 aaKnown RBP10.88□□□□□ -0.67
CPSF1-210ENST00000532935 TRBV7-9A0A0J9YWB2 115 aa10.87□□□□□ -0.67
CPSF1-210ENST00000532935 DIRC3C9JPN6 131 aa10.87□□□□□ -0.67
CPSF1-210ENST00000532935 PRR9Q5T870 116 aa10.87□□□□□ -0.67
CPSF1-210ENST00000532935 ACTR3CQ9C0K3 210 aaPredicted RBP10.87□□□□□ -0.67
CPSF1-210ENST00000532935 CTXND1A0A1B0GTU2 59 aa10.86□□□□□ -0.67
CPSF1-210ENST00000532935 NDUFS6O75380 124 aaKnown RBP10.86□□□□□ -0.67
CPSF1-210ENST00000532935 TAGLN2P37802 199 aaKnown RBP10.86□□□□□ -0.67
CPSF1-210ENST00000532935 PEA15Q15121 130 aa10.86□□□□□ -0.67
CPSF1-210ENST00000532935 CMTM2Q8TAZ6 248 aa10.86□□□□□ -0.67
CPSF1-210ENST00000532935 CBY3A6NI87 242 aa10.85□□□□□ -0.67
CPSF1-210ENST00000532935 SNURFLB1AK76 121 aa10.85□□□□□ -0.67
CPSF1-210ENST00000532935 GCHFRP30047 84 aa10.85□□□□□ -0.67
CPSF1-210ENST00000532935 FHITP49789 147 aa10.85□□□□□ -0.67
CPSF1-210ENST00000532935 TMEM88Q6PEY1 159 aa10.85□□□□□ -0.67
CPSF1-210ENST00000532935 ARL6IP6Q8N6S5 226 aa10.85□□□□□ -0.67
CPSF1-210ENST00000532935 SUN5Q8TC36 379 aa10.85□□□□□ -0.67
CPSF1-210ENST00000532935 SFT2D1Q8WV19 159 aa10.85□□□□□ -0.67
CPSF1-210ENST00000532935 LINC00467Q9BRT7 94 aa10.85□□□□□ -0.67
CPSF1-210ENST00000532935 RPH3ALQ9UNE2 315 aa10.85□□□□□ -0.67
CPSF1-210ENST00000532935 CXorf1O96002 111 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 ATP5G1P05496 136 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 P0DMU3 169 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 FAM231AP0DMU4 169 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 FAM231CP0DMU5 169 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 ATP5G3P48201 142 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 PPT1P50897 306 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 GOLT1AQ6ZVE7 132 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 SSX7Q7RTT5 188 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
CPSF1-210ENST00000532935 F5H768 121 aa10.83□□□□□ -0.68
CPSF1-210ENST00000532935 DAZ2Q13117 558 aaKnown RBP10.83□□□□□ -0.68
CPSF1-210ENST00000532935 ANXA2RQ3ZCQ2 193 aa10.83□□□□□ -0.68
CPSF1-210ENST00000532935 Q6ZQT7 251 aa10.83□□□□□ -0.68
CPSF1-210ENST00000532935 C11orf72Q8NBR9 251 aa10.83□□□□□ -0.68
CPSF1-210ENST00000532935 TMEM167BQ9NRX6 74 aa10.83□□□□□ -0.68
CPSF1-210ENST00000532935 TMEM218A2RU14 115 aa10.82□□□□□ -0.68
CPSF1-210ENST00000532935 MAP1LC3B2A6NCE7 125 aa10.82□□□□□ -0.68
CPSF1-210ENST00000532935 IFNA1P01562 189 aa10.82□□□□□ -0.68
CPSF1-210ENST00000532935 GNG5P63218 68 aa10.82□□□□□ -0.68
CPSF1-210ENST00000532935 ZNF726P1Q15940 193 aa10.82□□□□□ -0.68
CPSF1-210ENST00000532935 TOR2AQ5JU69 321 aa10.82□□□□□ -0.68
CPSF1-210ENST00000532935 MAP1LC3BQ9GZQ8 125 aa10.82□□□□□ -0.68
CPSF1-210ENST00000532935 GSN-AS1Q9NRJ2 163 aa10.82□□□□□ -0.68
CPSF1-210ENST00000532935 DNAH2Q9P225 4427 aa10.82□□□□□ -0.68
CPSF1-210ENST00000532935 NACAE9PAV3 2078 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 IGHV1OR15-1A0A075B7D0 117 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 GAGE12BA1L429 117 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 RBFOX3A6NFN3 312 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 GAGE7O76087 117 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 GAGE12FP0CL80 117 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 GAGE12GP0CL81 117 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 GAGE12IP0CL82 117 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 POM121L12Q8N7R1 296 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 C15orf53Q8NAA6 179 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 TP53TG3Q9ULZ0 132 aa10.81□□□□□ -0.68
CPSF1-210ENST00000532935 TRAV8-1A0A0A6YYK1 113 aa10.8□□□□□ -0.68
CPSF1-210ENST00000532935 ZNF506Q5JVG8 444 aa10.8□□□□□ -0.68
CPSF1-210ENST00000532935 C10orf91Q5T1B1 145 aa10.8□□□□□ -0.68
CPSF1-210ENST00000532935 Q6AWC8 147 aa10.8□□□□□ -0.68
CPSF1-210ENST00000532935 Q6ZTI0 123 aa10.8□□□□□ -0.68
CPSF1-210ENST00000532935 IQCF2Q8IXL9 164 aa10.8□□□□□ -0.68
CPSF1-210ENST00000532935 C5orf17Q8NAS9 161 aa10.8□□□□□ -0.68
CPSF1-210ENST00000532935 SEC11CQ9BY50 192 aa10.8□□□□□ -0.68
CPSF1-210ENST00000532935 TREM1Q9NP99 234 aa10.8□□□□□ -0.68
CPSF1-210ENST00000532935 MUC4Q99102 2169 aa10.79□□□□□ -0.68
CPSF1-210ENST00000532935 BIRC6Q9NR09 4857 aa10.79□□□□□ -0.68
CPSF1-210ENST00000532935 SERTM2A0A1B0GWG4 89 aa10.79□□□□□ -0.68
CPSF1-210ENST00000532935 GGTLC3B5MD39 225 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms