RNA–Protein interactions for RNA: ENST00000532339.1

CD44-235, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-235ENST00000532339 GPR32P1Q8NGA4 272 aa1.94□□□□□ -2.1
CD44-235ENST00000532339 DYNC2LI1Q8TCX1 351 aa1.94□□□□□ -2.1
CD44-235ENST00000532339 LZICQ8WZA0 190 aa1.94□□□□□ -2.1
CD44-235ENST00000532339 MRPS24Q96EL2 167 aaKnown RBP1.94□□□□□ -2.1
CD44-235ENST00000532339 SEC22CQ9BRL7 303 aa1.94□□□□□ -2.1
CD44-235ENST00000532339 ANAPC13Q9BS18 74 aa1.94□□□□□ -2.1
CD44-235ENST00000532339 FAAP24Q9BTP7 215 aa1.94□□□□□ -2.1
CD44-235ENST00000532339 TRAV8-2A0A0B4J237 113 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 IBA57-AS1B1ANH7 110 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 CDC42EP2O14613 210 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 LECT2O14960 151 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 RGS5O15539 181 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 IGKV1-17P01599 117 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 GYPBP06028 91 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 SAA2P0DJI9 122 aaPredicted RBP1.93□□□□□ -2.1
CD44-235ENST00000532339 SCGB1C2P0DMR2 95 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 NUDT2P50583 147 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 TPRXLQ17RH7 258 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 ASB16-AS1Q495Z4 193 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 TMEM136Q6ZRR5 245 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 SCGB1C1Q8TD33 95 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 TMEM56Q96MV1 263 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 C7orf50Q9BRJ6 194 aaKnown RBP1.93□□□□□ -2.1
CD44-235ENST00000532339 OR51E2Q9H255 320 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 VSIRQ9H7M9 311 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 GPR84Q9NQS5 396 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 C14orf166Q9Y224 244 aaKnown RBP1.93□□□□□ -2.1
CD44-235ENST00000532339 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
CD44-235ENST00000532339 IGKV1OR2-108A0A075B7D4 117 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 H0YJX3 145 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 H3BMM0 161 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 DENRO43583 198 aaKnown RBP1.92□□□□□ -2.1
CD44-235ENST00000532339 E2F6O75461 281 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 ZNF682O95780 498 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 DHFRP00374 187 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 IGKV1-16P04430 117 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 GTF2F2P13984 249 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 HIST1H1BP16401 226 aaKnown RBP1.92□□□□□ -2.1
CD44-235ENST00000532339 HLA-DMAP28067 261 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 UBE2G2P60604 165 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 CIRBPQ14011 172 aaKnown RBP1.92□□□□□ -2.1
CD44-235ENST00000532339 KLK9Q2XQG4 91 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 MORN2Q502X0 79 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 PRR9Q5T870 116 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 LYPD5Q6UWN5 251 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 SPATA24Q86W54 205 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 WFDC10BQ8IUB3 73 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 AMN1Q8IY45 258 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 ZFP82Q8N141 532 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 OR2T4Q8NH00 348 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 OR4K13Q8NH42 304 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 BORCS8Q96FH0 119 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 ERMAPQ96PL5 475 aaPredicted RBP1.92□□□□□ -2.1
CD44-235ENST00000532339 RABAC1Q9UI14 185 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 KLK9Q9UKQ9 250 aa1.92□□□□□ -2.1
CD44-235ENST00000532339 FLGP20930 4061 aaPredicted RBP1.92□□□□□ -2.1
CD44-235ENST00000532339 TRAV14DV4A0A0A6YYC5 116 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 IGHV3-21A0A0B4J1V1 117 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 TMEM30CPA0ZSE6 113 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 FABP12A6NFH5 140 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 TMEM250H0YL14 139 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 PGRMC1O00264 195 aaKnown RBP1.91□□□□□ -2.1
CD44-235ENST00000532339 PITX3O75364 302 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 ISG15P05161 165 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 PFN1P07737 140 aaKnown RBP1.91□□□□□ -2.1
CD44-235ENST00000532339 PTHLHP12272 177 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 HIST1H1CP16403 213 aaKnown RBP1.91□□□□□ -2.1
CD44-235ENST00000532339 PPP1CCP36873 323 aaKnown RBP1.91□□□□□ -2.1
CD44-235ENST00000532339 PSMD7P51665 324 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 KISS1Q15726 138 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 LAIR2Q6ISS4 152 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 FAM19A3Q7Z5A8 133 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 OR1P1Q8NH06 330 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 DGCR14Q96DF8 476 aaKnown RBP1.91□□□□□ -2.1
CD44-235ENST00000532339 TMEM208Q9BTX3 173 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 ZNF492Q9P255 531 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 POMPQ9Y244 141 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 V9GYS6 101 aa1.91□□□□□ -2.1
CD44-235ENST00000532339 IGKV1-12A0A0C4DH73 117 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 NAPSAO96009 420 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 HLA-DRB4P13762 266 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 CRHBPP24387 322 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 RBP2P50120 134 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 BLVRAP53004 296 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 FXYD6P3P58550 94 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 DR1Q01658 176 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 IL15RAQ13261 267 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 PSMG4Q5JS54 123 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 ADM2Q7Z4H4 148 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 C1orf64Q8NEQ6 169 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 DCANP1Q8TF63 244 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 ACOT12Q8WYK0 555 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 SHANK2-AS3Q9BTD1 123 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 JPT1Q9UK76 154 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 SAMHD1Q9Y3Z3 626 aaKnown RBP1.9□□□□□ -2.11
CD44-235ENST00000532339 ICOSQ9Y6W8 199 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.11
CD44-235ENST00000532339 TMEM269A0A1B0GVZ9 245 aa1.89□□□□□ -2.11
CD44-235ENST00000532339 A6NIN4 97 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms