RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 IGFL4Q6B9Z1 124 aa12.87□□□□□ -0.35
SCN4B-205ENST00000531550 C11orf52Q96A22 123 aa12.87□□□□□ -0.35
SCN4B-205ENST00000531550 M0R3E3 92 aa12.86□□□□□ -0.35
SCN4B-205ENST00000531550 RNF182Q8N6D2 247 aa12.86□□□□□ -0.35
SCN4B-205ENST00000531550 C20orf173Q96LM9 149 aa12.86□□□□□ -0.35
SCN4B-205ENST00000531550 TREM1Q9NP99 234 aa12.86□□□□□ -0.35
SCN4B-205ENST00000531550 SERTM2A0A1B0GWG4 89 aa12.85□□□□□ -0.35
SCN4B-205ENST00000531550 DIRC3C9JPN6 131 aa12.85□□□□□ -0.35
SCN4B-205ENST00000531550 C9JQL5 133 aa12.85□□□□□ -0.35
SCN4B-205ENST00000531550 TCRAP04437 139 aa12.85□□□□□ -0.35
SCN4B-205ENST00000531550 PSMG4Q5JS54 123 aa12.85□□□□□ -0.35
SCN4B-205ENST00000531550 SLC7A5P1Q8MH63 180 aa12.85□□□□□ -0.35
SCN4B-205ENST00000531550 RPUSD4Q96CM3 377 aaKnown RBP12.85□□□□□ -0.35
SCN4B-205ENST00000531550 ATG101Q9BSB4 218 aa12.85□□□□□ -0.35
SCN4B-205ENST00000531550 C1QTNF4Q9BXJ3 329 aa12.85□□□□□ -0.35
SCN4B-205ENST00000531550 SLC35B3Q9H1N7 401 aa12.85□□□□□ -0.35
SCN4B-205ENST00000531550 LRP1BQ9NZR2 4599 aa12.84□□□□□ -0.35
SCN4B-205ENST00000531550 SCO2A0A1W2PP80 73 aa12.84□□□□□ -0.35
SCN4B-205ENST00000531550 PEX7O00628 323 aa12.84□□□□□ -0.35
SCN4B-205ENST00000531550 C1orf134Q5TEV5 83 aa12.84□□□□□ -0.35
SCN4B-205ENST00000531550 LINC00052Q96N35 136 aa12.84□□□□□ -0.35
SCN4B-205ENST00000531550 XCL2Q9UBD3 114 aa12.84□□□□□ -0.35
SCN4B-205ENST00000531550 RBAKDNA6NC62 111 aa12.83□□□□□ -0.36
SCN4B-205ENST00000531550 ZNF705FA8MVS1 300 aaPredicted RBP12.83□□□□□ -0.36
SCN4B-205ENST00000531550 GNG5P63218 68 aa12.83□□□□□ -0.36
SCN4B-205ENST00000531550 CYB561D1Q8N8Q1 229 aa12.83□□□□□ -0.36
SCN4B-205ENST00000531550 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
SCN4B-205ENST00000531550 FAM210BQ96KR6 192 aa12.83□□□□□ -0.36
SCN4B-205ENST00000531550 KLF12Q9Y4X4 402 aa12.83□□□□□ -0.36
SCN4B-205ENST00000531550 FBLL1A6NHQ2 334 aaKnown RBP12.82□□□□□ -0.36
SCN4B-205ENST00000531550 K7EQM0 130 aa12.82□□□□□ -0.36
SCN4B-205ENST00000531550 CDK2AP2O75956 126 aa12.82□□□□□ -0.36
SCN4B-205ENST00000531550 S100A9P06702 114 aaKnown RBP12.82□□□□□ -0.36
SCN4B-205ENST00000531550 SPART-AS1P0CW21 52 aa12.82□□□□□ -0.36
SCN4B-205ENST00000531550 NUTF2P61970 127 aaKnown RBP12.82□□□□□ -0.36
SCN4B-205ENST00000531550 MAPKAPK5-AS1Q8N8E1 139 aa12.82□□□□□ -0.36
SCN4B-205ENST00000531550 TMEM218A2RU14 115 aa12.81□□□□□ -0.36
SCN4B-205ENST00000531550 C16orf90A8MZG2 172 aa12.81□□□□□ -0.36
SCN4B-205ENST00000531550 PRAC2D3DTV9 90 aa12.81□□□□□ -0.36
SCN4B-205ENST00000531550 AKR1C3P42330 323 aa12.81□□□□□ -0.36
SCN4B-205ENST00000531550 CNN1P51911 297 aaKnown RBP12.81□□□□□ -0.36
SCN4B-205ENST00000531550 RNF212Q495C1 297 aa12.81□□□□□ -0.36
SCN4B-205ENST00000531550 ZNF705AQ6ZN79 300 aaPredicted RBP12.81□□□□□ -0.36
SCN4B-205ENST00000531550 GOLT1AQ6ZVE7 132 aa12.81□□□□□ -0.36
SCN4B-205ENST00000531550 NEU1Q99519 415 aa12.81□□□□□ -0.36
SCN4B-205ENST00000531550 RPH3ALQ9UNE2 315 aa12.81□□□□□ -0.36
SCN4B-205ENST00000531550 TRBV6-1A0A0K0K1D8 114 aa12.8□□□□□ -0.36
SCN4B-205ENST00000531550 TMEM189A5PLL7 270 aa12.8□□□□□ -0.36
SCN4B-205ENST00000531550 H3BMM0 161 aa12.8□□□□□ -0.36
SCN4B-205ENST00000531550 EMP1P54849 157 aa12.8□□□□□ -0.36
SCN4B-205ENST00000531550 TAS2R60P59551 318 aa12.8□□□□□ -0.36
SCN4B-205ENST00000531550 TMEM183BQ1AE95 376 aa12.8□□□□□ -0.36
SCN4B-205ENST00000531550 FAM74A3Q4VXF1 159 aa12.8□□□□□ -0.36
SCN4B-205ENST00000531550 C9orf47Q6ZRZ4 202 aa12.8□□□□□ -0.36
SCN4B-205ENST00000531550 TMEM75Q8N9X5 138 aa12.8□□□□□ -0.36
SCN4B-205ENST00000531550 OR8A1Q8NGG7 326 aa12.8□□□□□ -0.36
SCN4B-205ENST00000531550 NACAE9PAV3 2078 aa12.79□□□□□ -0.36
SCN4B-205ENST00000531550 SFTA3P0C7M3 94 aa12.79□□□□□ -0.36
SCN4B-205ENST00000531550 ZNF705DP0CH99 300 aaPredicted RBP12.79□□□□□ -0.36
SCN4B-205ENST00000531550 ZNF705BP0CI00 300 aaPredicted RBP12.79□□□□□ -0.36
SCN4B-205ENST00000531550 FOXI2Q6ZQN5 318 aa12.79□□□□□ -0.36
SCN4B-205ENST00000531550 OR10J6PQ8NGY7 276 aa12.79□□□□□ -0.36
SCN4B-205ENST00000531550 FMC1Q96HJ9 113 aa12.79□□□□□ -0.36
SCN4B-205ENST00000531550 PARLQ9H300 379 aa12.79□□□□□ -0.36
SCN4B-205ENST00000531550 PPP1R14DQ9NXH3 145 aa12.79□□□□□ -0.36
SCN4B-205ENST00000531550 IGKV2-40A0A087WW87 121 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-205ENST00000531550 A0A0J9YX75 114 aa12.78□□□□□ -0.36
SCN4B-205ENST00000531550 IGKV2D-40P01614 121 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-205ENST00000531550 IGLV2-11P01706 119 aa12.78□□□□□ -0.36
SCN4B-205ENST00000531550 RPL35P42766 123 aaKnown RBP12.78□□□□□ -0.36
SCN4B-205ENST00000531550 LINC00477Q96M19 166 aa12.78□□□□□ -0.36
SCN4B-205ENST00000531550 LINC00479Q96M42 142 aa12.78□□□□□ -0.36
SCN4B-205ENST00000531550 DERL1Q9BUN8 251 aa12.78□□□□□ -0.36
SCN4B-205ENST00000531550 SAV1Q9H4B6 383 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-205ENST00000531550 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
SCN4B-205ENST00000531550 APOBP04114 4563 aaKnown RBP12.78□□□□□ -0.36
SCN4B-205ENST00000531550 TRAV34A0A0B4J273 112 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 TEX48A0A1B0GUV7 120 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 SMIM9A6NGZ8 99 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 NPIPB6E9PJ23 425 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 HLA-DRB4P13762 266 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 CEBPGP53567 150 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 UBE2G1P62253 170 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 FLI1Q01543 452 aaPredicted RBP12.77□□□□□ -0.37
SCN4B-205ENST00000531550 TNP2Q05952 138 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 FAM222AQ5U5X8 452 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 EBLN2Q6P2I7 272 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 VGLL1Q99990 258 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 NIPSNAP3BQ9BS92 247 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 SEC11CQ9BY50 192 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 AGPAT4-IT1Q9H0P7 198 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 PSG8Q9UQ74 426 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 HLA-DRB4X5D2U9 266 aa12.77□□□□□ -0.37
SCN4B-205ENST00000531550 IGHV3OR16-12A0A075B7B8 117 aa12.76□□□□□ -0.37
SCN4B-205ENST00000531550 ZNF727A8MUV8 499 aa12.76□□□□□ -0.37
SCN4B-205ENST00000531550 KRBOX1C9JBD0 128 aa12.76□□□□□ -0.37
SCN4B-205ENST00000531550 C9JCJ5 164 aa12.76□□□□□ -0.37
SCN4B-205ENST00000531550 F6UB75 175 aa12.76□□□□□ -0.37
SCN4B-205ENST00000531550 DUSP14O95147 198 aaKnown RBP12.76□□□□□ -0.37
SCN4B-205ENST00000531550 HTN3P15516 51 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms