RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 RYR3Q15413 4870 aa13.53□□□□□ -0.24
PACSIN3-208ENST00000531226 FAM74A7A6NL05 159 aa13.52□□□□□ -0.25
PACSIN3-208ENST00000531226 EIF4E3Q8N5X7 224 aaKnown RBP13.52□□□□□ -0.25
PACSIN3-208ENST00000531226 MBD3L1Q8WWY6 194 aa13.52□□□□□ -0.25
PACSIN3-208ENST00000531226 NKX6-2Q9C056 277 aaPredicted RBP13.52□□□□□ -0.25
PACSIN3-208ENST00000531226 TIMM8BQ9Y5J9 83 aaPredicted RBP13.52□□□□□ -0.25
PACSIN3-208ENST00000531226 DYNC2H1Q8NCM8 4307 aaKnown RBP13.52□□□□□ -0.25
PACSIN3-208ENST00000531226 RGS13O14921 159 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 TCTAP57738 103 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 ANXA2RQ3ZCQ2 193 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 ZFP69Q49AA0 526 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 Q6AWC8 147 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 EIF5AL1Q6IS14 154 aaKnown RBP13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 Q6ZQT7 251 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 SLC51BQ86UW2 128 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 C9orf62Q8N4C0 152 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 CYB561D1Q8N8Q1 229 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 SGK494Q96LW2 274 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 ATG101Q9BSB4 218 aa13.51□□□□□ -0.25
PACSIN3-208ENST00000531226 IGLL5B9A064 214 aa13.5□□□□□ -0.25
PACSIN3-208ENST00000531226 TMEM75Q8N9X5 138 aa13.5□□□□□ -0.25
PACSIN3-208ENST00000531226 ZNF680Q8NEM1 530 aa13.5□□□□□ -0.25
PACSIN3-208ENST00000531226 SFT2D1Q8WV19 159 aa13.5□□□□□ -0.25
PACSIN3-208ENST00000531226 TVP23CQ96ET8 276 aa13.5□□□□□ -0.25
PACSIN3-208ENST00000531226 TREM1Q9NP99 234 aa13.5□□□□□ -0.25
PACSIN3-208ENST00000531226 NOP10Q9NPE3 64 aaKnown RBP13.5□□□□□ -0.25
PACSIN3-208ENST00000531226 ARL2-SNX15V9GYD0 113 aa13.5□□□□□ -0.25
PACSIN3-208ENST00000531226 IGHV1OR15-1A0A075B7D0 117 aa13.49□□□□□ -0.25
PACSIN3-208ENST00000531226 FBLL1A6NHQ2 334 aaKnown RBP13.49□□□□□ -0.25
PACSIN3-208ENST00000531226 CBY3A6NI87 242 aa13.49□□□□□ -0.25
PACSIN3-208ENST00000531226 SNURFLB1AK76 121 aa13.49□□□□□ -0.25
PACSIN3-208ENST00000531226 IFNA7P01567 189 aa13.49□□□□□ -0.25
PACSIN3-208ENST00000531226 IGLV2-11P01706 119 aa13.49□□□□□ -0.25
PACSIN3-208ENST00000531226 C11orf72Q8NBR9 251 aa13.49□□□□□ -0.25
PACSIN3-208ENST00000531226 LINC00476Q8WZB0 136 aa13.49□□□□□ -0.25
PACSIN3-208ENST00000531226 NDFIP1Q9BT67 221 aa13.49□□□□□ -0.25
PACSIN3-208ENST00000531226 PSG8Q9UQ74 426 aa13.49□□□□□ -0.25
PACSIN3-208ENST00000531226 IGHV4-4A0A075B6R2 117 aa13.48□□□□□ -0.25
PACSIN3-208ENST00000531226 F6UZH7 168 aa13.48□□□□□ -0.25
PACSIN3-208ENST00000531226 H2AFB1P0C5Y9 115 aa13.48□□□□□ -0.25
PACSIN3-208ENST00000531226 DEFB130BP0DP73 79 aa13.48□□□□□ -0.25
PACSIN3-208ENST00000531226 DEFB130AP0DP74 79 aa13.48□□□□□ -0.25
PACSIN3-208ENST00000531226 RAB5CP51148 216 aa13.48□□□□□ -0.25
PACSIN3-208ENST00000531226 FLI1Q01543 452 aaPredicted RBP13.48□□□□□ -0.25
PACSIN3-208ENST00000531226 LYSTQ99698 3801 aa13.48□□□□□ -0.25
PACSIN3-208ENST00000531226 APLNQ9ULZ1 77 aa13.48□□□□□ -0.25
PACSIN3-208ENST00000531226 PEX7O00628 323 aa13.47□□□□□ -0.25
PACSIN3-208ENST00000531226 SULT1A2P50226 295 aa13.47□□□□□ -0.25
PACSIN3-208ENST00000531226 DAZ2Q13117 558 aaKnown RBP13.47□□□□□ -0.25
PACSIN3-208ENST00000531226 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
PACSIN3-208ENST00000531226 LINC00612Q8N6U2 182 aa13.47□□□□□ -0.25
PACSIN3-208ENST00000531226 HIST1H2BAQ96A08 127 aa13.47□□□□□ -0.25
PACSIN3-208ENST00000531226 PLECQ15149 4684 aaKnown RBP13.47□□□□□ -0.25
PACSIN3-208ENST00000531226 A0A1B0GV50 99 aa13.46□□□□□ -0.25
PACSIN3-208ENST00000531226 HTN3P15516 51 aa13.46□□□□□ -0.25
PACSIN3-208ENST00000531226 MUC21Q5SSG8 566 aa13.46□□□□□ -0.25
PACSIN3-208ENST00000531226 PRNTQ86SH4 94 aa13.46□□□□□ -0.25
PACSIN3-208ENST00000531226 GSN-AS1Q9NRJ2 163 aa13.46□□□□□ -0.25
PACSIN3-208ENST00000531226 TP53TG3Q9ULZ0 132 aa13.46□□□□□ -0.25
PACSIN3-208ENST00000531226 ALMS1Q8TCU4 4167 aa13.45□□□□□ -0.26
PACSIN3-208ENST00000531226 TRAV21A0A0B4J279 112 aa13.45□□□□□ -0.26
PACSIN3-208ENST00000531226 PAGE4O60829 102 aa13.45□□□□□ -0.26
PACSIN3-208ENST00000531226 PPT1P50897 306 aa13.45□□□□□ -0.26
PACSIN3-208ENST00000531226 TCL1AP56279 114 aa13.45□□□□□ -0.26
PACSIN3-208ENST00000531226 CST9LP1Q5W188 147 aa13.45□□□□□ -0.26
PACSIN3-208ENST00000531226 C8orf49Q96NF6 230 aa13.45□□□□□ -0.26
PACSIN3-208ENST00000531226 TCEAL7Q9BRU2 100 aa13.45□□□□□ -0.26
PACSIN3-208ENST00000531226 TRAV34A0A0B4J273 112 aa13.44□□□□□ -0.26
PACSIN3-208ENST00000531226 LY6G6CO95867 125 aa13.44□□□□□ -0.26
PACSIN3-208ENST00000531226 ATP5G1P05496 136 aa13.44□□□□□ -0.26
PACSIN3-208ENST00000531226 ATP5G3P48201 142 aa13.44□□□□□ -0.26
PACSIN3-208ENST00000531226 FAM159AQ6UWV7 190 aa13.44□□□□□ -0.26
PACSIN3-208ENST00000531226 FAM210BQ96KR6 192 aa13.44□□□□□ -0.26
PACSIN3-208ENST00000531226 LINC00479Q96M42 142 aa13.44□□□□□ -0.26
PACSIN3-208ENST00000531226 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
PACSIN3-208ENST00000531226 MUC4Q99102 2169 aa13.44□□□□□ -0.26
PACSIN3-208ENST00000531226 TRAV1-1A0A0B4J248 108 aa13.43□□□□□ -0.26
PACSIN3-208ENST00000531226 ZNF415Q09FC8 603 aa13.43□□□□□ -0.26
PACSIN3-208ENST00000531226 TDRG1Q3Y452 100 aa13.43□□□□□ -0.26
PACSIN3-208ENST00000531226 SAPCD1Q5SSQ6 148 aa13.43□□□□□ -0.26
PACSIN3-208ENST00000531226 Q86TA4 180 aa13.43□□□□□ -0.26
PACSIN3-208ENST00000531226 NAGKQ9UJ70 344 aa13.43□□□□□ -0.26
PACSIN3-208ENST00000531226 KLF12Q9Y4X4 402 aa13.43□□□□□ -0.26
PACSIN3-208ENST00000531226 SACSQ9NZJ4 4579 aa13.43□□□□□ -0.26
PACSIN3-208ENST00000531226 TRGV11A0A075B6L2 103 aa13.42□□□□□ -0.26
PACSIN3-208ENST00000531226 GAGE12BA1L429 117 aa13.42□□□□□ -0.26
PACSIN3-208ENST00000531226 GAGE7O76087 117 aa13.42□□□□□ -0.26
PACSIN3-208ENST00000531226 GAGE12FP0CL80 117 aa13.42□□□□□ -0.26
PACSIN3-208ENST00000531226 GAGE12GP0CL81 117 aa13.42□□□□□ -0.26
PACSIN3-208ENST00000531226 GAGE12IP0CL82 117 aa13.42□□□□□ -0.26
PACSIN3-208ENST00000531226 ZNF80P51504 273 aaPredicted RBP13.42□□□□□ -0.26
PACSIN3-208ENST00000531226 SMUG1Q53HV7 270 aa13.42□□□□□ -0.26
PACSIN3-208ENST00000531226 LGALS9CQ6DKI2 356 aa13.42□□□□□ -0.26
PACSIN3-208ENST00000531226 Q6ZTI0 123 aa13.42□□□□□ -0.26
PACSIN3-208ENST00000531226 SPINK4O60575 86 aa13.41□□□□□ -0.26
PACSIN3-208ENST00000531226 GCGP01275 180 aa13.41□□□□□ -0.26
PACSIN3-208ENST00000531226 NKX2-5P52952 324 aaPredicted RBP13.41□□□□□ -0.26
PACSIN3-208ENST00000531226 TMEM183BQ1AE95 376 aa13.41□□□□□ -0.26
PACSIN3-208ENST00000531226 TMEM183AQ8IXX5 376 aa13.41□□□□□ -0.26
PACSIN3-208ENST00000531226 FMC1Q96HJ9 113 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms