RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 MSRB1Q9NZV6 116 aa13.15□□□□□ -0.3
BRCA2-204ENST00000530893 PKD1L2Q7Z442 2459 aa13.15□□□□□ -0.3
BRCA2-204ENST00000530893 A0A0G2JLM5 398 aa13.15□□□□□ -0.3
BRCA2-204ENST00000530893 B4DSR2 109 aa13.15□□□□□ -0.3
BRCA2-204ENST00000530893 TFPI2P48307 235 aa13.15□□□□□ -0.3
BRCA2-204ENST00000530893 HINT1P49773 126 aaPredicted RBP13.15□□□□□ -0.3
BRCA2-204ENST00000530893 LY6EQ16553 131 aa13.15□□□□□ -0.3
BRCA2-204ENST00000530893 PRSS57Q6UWY2 283 aa13.15□□□□□ -0.3
BRCA2-204ENST00000530893 LINC00477Q96M19 166 aa13.15□□□□□ -0.3
BRCA2-204ENST00000530893 NXT2Q9NPJ8 142 aaKnown RBP13.15□□□□□ -0.3
BRCA2-204ENST00000530893 ZNF580Q9UK33 172 aa13.15□□□□□ -0.3
BRCA2-204ENST00000530893 IGHV4-4A0A075B6R2 117 aa13.14□□□□□ -0.31
BRCA2-204ENST00000530893 SMIM15Q7Z3B0 74 aa13.14□□□□□ -0.31
BRCA2-204ENST00000530893 PMCHL2Q9BQD1 86 aa13.14□□□□□ -0.31
BRCA2-204ENST00000530893 SMKR1H3BMG3 65 aa13.13□□□□□ -0.31
BRCA2-204ENST00000530893 OVOL1O14753 267 aa13.13□□□□□ -0.31
BRCA2-204ENST00000530893 UNQ9165/PRO28630Q6UXU0 137 aa13.13□□□□□ -0.31
BRCA2-204ENST00000530893 C11orf21Q9P2W6 132 aa13.13□□□□□ -0.31
BRCA2-204ENST00000530893 GOLT1BQ9Y3E0 138 aa13.13□□□□□ -0.31
BRCA2-204ENST00000530893 IGLV1-40P01703 118 aa13.13□□□□□ -0.31
BRCA2-204ENST00000530893 CACNG7P62955 275 aa13.13□□□□□ -0.31
BRCA2-204ENST00000530893 ZNF738Q8NE65 137 aa13.13□□□□□ -0.31
BRCA2-204ENST00000530893 OR8A1Q8NGG7 326 aa13.13□□□□□ -0.31
BRCA2-204ENST00000530893 IGHV7-4-1A0A0J9YVY3 117 aa13.12□□□□□ -0.31
BRCA2-204ENST00000530893 SOCS3O14543 225 aa13.12□□□□□ -0.31
BRCA2-204ENST00000530893 SNAI2O43623 268 aa13.12□□□□□ -0.31
BRCA2-204ENST00000530893 TNFRSF6BO95407 300 aa13.12□□□□□ -0.31
BRCA2-204ENST00000530893 NCR2O95944 276 aa13.12□□□□□ -0.31
BRCA2-204ENST00000530893 TRBV12-3P01733 135 aa13.12□□□□□ -0.31
BRCA2-204ENST00000530893 MCRIP2Q9BUT9 160 aaKnown RBP13.12□□□□□ -0.31
BRCA2-204ENST00000530893 SMAD7O15105 426 aaKnown RBP13.12□□□□□ -0.31
BRCA2-204ENST00000530893 PF4V1P10720 104 aa13.12□□□□□ -0.31
BRCA2-204ENST00000530893 OR10J6PQ8NGY7 276 aa13.12□□□□□ -0.31
BRCA2-204ENST00000530893 ORAOV1Q8WV07 137 aa13.12□□□□□ -0.31
BRCA2-204ENST00000530893 COX8AP10176 69 aa13.11□□□□□ -0.31
BRCA2-204ENST00000530893 ZNF124Q15973 351 aa13.11□□□□□ -0.31
BRCA2-204ENST00000530893 C12orf54Q6X4T0 127 aa13.11□□□□□ -0.31
BRCA2-204ENST00000530893 GPHB5Q86YW7 130 aa13.11□□□□□ -0.31
BRCA2-204ENST00000530893 DEFB125Q8N687 156 aa13.11□□□□□ -0.31
BRCA2-204ENST00000530893 OR4X2Q8NGF9 303 aa13.11□□□□□ -0.31
BRCA2-204ENST00000530893 OR1N2Q8NGR9 330 aa13.11□□□□□ -0.31
BRCA2-204ENST00000530893 IFI27L1Q96BM0 104 aa13.11□□□□□ -0.31
BRCA2-204ENST00000530893 PRSS47A8MTI9 375 aa13.1□□□□□ -0.31
BRCA2-204ENST00000530893 TRBV7-9A0A0J9YWB2 115 aa13.1□□□□□ -0.31
BRCA2-204ENST00000530893 SLC25A16P16260 332 aa13.1□□□□□ -0.31
BRCA2-204ENST00000530893 BLCAPP62952 87 aa13.1□□□□□ -0.31
BRCA2-204ENST00000530893 FOXE3Q13461 319 aa13.1□□□□□ -0.31
BRCA2-204ENST00000530893 C20orf173Q96LM9 149 aa13.1□□□□□ -0.31
BRCA2-204ENST00000530893 FCER1GP30273 86 aa13.09□□□□□ -0.31
BRCA2-204ENST00000530893 CFHR3Q02985 330 aa13.09□□□□□ -0.31
BRCA2-204ENST00000530893 PSMG4Q5JS54 123 aa13.09□□□□□ -0.31
BRCA2-204ENST00000530893 KLK15Q9H2R5 256 aa13.09□□□□□ -0.31
BRCA2-204ENST00000530893 DOPEY1Q5JWR5 2465 aa13.08□□□□□ -0.32
BRCA2-204ENST00000530893 TRAV21A0A0B4J279 112 aa13.08□□□□□ -0.32
BRCA2-204ENST00000530893 IGHV3-11P01762 117 aa13.08□□□□□ -0.32
BRCA2-204ENST00000530893 MPV17L2Q567V2 206 aa13.08□□□□□ -0.32
BRCA2-204ENST00000530893 SPANXN1Q5VSR9 72 aa13.08□□□□□ -0.32
BRCA2-204ENST00000530893 SAMD13Q5VXD3 122 aa13.08□□□□□ -0.32
BRCA2-204ENST00000530893 Q8N8P6 123 aa13.08□□□□□ -0.32
BRCA2-204ENST00000530893 DAZ1Q9NQZ3 744 aaKnown RBP13.08□□□□□ -0.32
BRCA2-204ENST00000530893 COX11Q9Y6N1 276 aa13.08□□□□□ -0.32
BRCA2-204ENST00000530893 K7EMT4 169 aa13.07□□□□□ -0.32
BRCA2-204ENST00000530893 NPSP0C0P6 89 aa13.07□□□□□ -0.32
BRCA2-204ENST00000530893 EVI2AP22794 236 aa13.07□□□□□ -0.32
BRCA2-204ENST00000530893 ZFAND2AQ8N6M9 145 aa13.07□□□□□ -0.32
BRCA2-204ENST00000530893 OR2K2Q8NGT1 345 aa13.07□□□□□ -0.32
BRCA2-204ENST00000530893 APRG1Q8IVJ8 170 aa13.06□□□□□ -0.32
BRCA2-204ENST00000530893 FAM19A4Q96LR4 140 aa13.06□□□□□ -0.32
BRCA2-204ENST00000530893 NUDT3O95989 172 aa13.06□□□□□ -0.32
BRCA2-204ENST00000530893 MED14OSP0DP75 135 aa13.06□□□□□ -0.32
BRCA2-204ENST00000530893 LEPP41159 167 aa13.06□□□□□ -0.32
BRCA2-204ENST00000530893 BVES-AS1Q5T3Y7 98 aa13.06□□□□□ -0.32
BRCA2-204ENST00000530893 PRR9Q5T870 116 aa13.06□□□□□ -0.32
BRCA2-204ENST00000530893 RHPN1-AS1Q9BWJ2 59 aa13.06□□□□□ -0.32
BRCA2-204ENST00000530893 ZFHX3Q15911 3703 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 VPS13CQ709C8 3753 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 IGLV2-18A0A075B6J9 118 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 AVPP01185 164 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 MRAP2Q96G30 205 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 PEF1Q9UBV8 284 aaKnown RBP13.05□□□□□ -0.32
BRCA2-204ENST00000530893 SPTAN1Q13813 2472 aaKnown RBP13.05□□□□□ -0.32
BRCA2-204ENST00000530893 TMEM89A2RUT3 159 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 J3QLI3 93 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 GAS8-AS1O95177 125 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 FXYD7P58549 80 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 Q6ZS46 218 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 LINC01356Q8N9X3 169 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 TP73-AS1Q9UF72 201 aa13.05□□□□□ -0.32
BRCA2-204ENST00000530893 RPL11P62913 178 aaKnown RBP13.04□□□□□ -0.32
BRCA2-204ENST00000530893 NRACQ8N912 160 aa13.04□□□□□ -0.32
BRCA2-204ENST00000530893 SMPXQ9UHP9 88 aa13.04□□□□□ -0.32
BRCA2-204ENST00000530893 CFAP46Q8IYW2 2715 aa13.04□□□□□ -0.32
BRCA2-204ENST00000530893 ACACBO00763 2458 aa13.04□□□□□ -0.32
BRCA2-204ENST00000530893 H3BVH4 76 aa13.03□□□□□ -0.32
BRCA2-204ENST00000530893 UFC1Q9Y3C8 167 aa13.03□□□□□ -0.32
BRCA2-204ENST00000530893 ANKRD39Q53RE8 183 aa13.03□□□□□ -0.32
BRCA2-204ENST00000530893 COL12A1Q99715 3063 aa13.02□□□□□ -0.32
BRCA2-204ENST00000530893 FGF6P10767 208 aa13.02□□□□□ -0.33
BRCA2-204ENST00000530893 GATA1P15976 413 aaPredicted RBP13.02□□□□□ -0.33
BRCA2-204ENST00000530893 PSMB8P28062 276 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms