RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 RNF222A6NCQ9 220 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 C16orf90A8MZG2 172 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 INSP01308 110 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 ANXA3P12429 323 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 AKR1C4P17516 323 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 GALR1P47211 349 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 IL18Q14116 193 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 UFSP1Q6NVU6 142 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 LYZL2Q7Z4W2 148 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 CLVS1Q8IUQ0 354 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-213ENST00000530784 OR51S1Q8NGJ8 323 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 IGF2BP2-AS1Q96M15 143 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 SCGB3A2Q96PL1 93 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 TRGV9Q99603 122 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 SLC25A22Q9H936 323 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 SCP2D1Q9UJQ7 156 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 PAIP2BQ9ULR5 123 aaKnown RBP4.46□□□□□ -1.7
CSDE1-213ENST00000530784 DNAH6Q9C0G6 4158 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 DNAH2Q9P225 4427 aa4.45□□□□□ -1.7
CSDE1-213ENST00000530784 LYRM9A8MSI8 78 aa4.45□□□□□ -1.7
CSDE1-213ENST00000530784 CFDP00746 253 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-213ENST00000530784 IAPPP10997 89 aa4.45□□□□□ -1.7
CSDE1-213ENST00000530784 S100A7P31151 101 aa4.45□□□□□ -1.7
CSDE1-213ENST00000530784 RAB11AP62491 216 aa4.45□□□□□ -1.7
CSDE1-213ENST00000530784 AMTNQ6UX39 209 aa4.45□□□□□ -1.7
CSDE1-213ENST00000530784 C16orf74Q96GX8 76 aa4.45□□□□□ -1.7
CSDE1-213ENST00000530784 BCL7BQ9BQE9 202 aa4.45□□□□□ -1.7
CSDE1-213ENST00000530784 MCUBQ9NWR8 336 aa4.45□□□□□ -1.7
CSDE1-213ENST00000530784 RABL2AQ9UBK7 228 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-213ENST00000530784 RABL2BQ9UNT1 228 aa4.45□□□□□ -1.7
CSDE1-213ENST00000530784 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 IGKV1OR2-108A0A075B7D4 117 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 NBDYA0A0U1RRE5 68 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 DUXBA0A1W2PPF3 345 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 ANKRD20A5PA0PJZ0 165 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 FAM231BA6NCW3 169 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 ZNF98A6NK75 572 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 A8MTW9 85 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 ZNF705GA8MUZ8 300 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-213ENST00000530784 F5H768 121 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 M0R2Z0 102 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 DEFB130BP0DP73 79 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 DEFB130AP0DP74 79 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 ORM2P19652 201 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 TSPOP30536 169 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 TMBIM6P55061 237 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 B2MP61769 119 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 AKR1C1Q04828 323 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 SPINK13Q1W4C9 94 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 TMED4Q7Z7H5 227 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 BAP18Q8IXM2 172 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 C6orf223Q8N319 242 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 BPIFCQ8NFQ6 507 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 OR11H7Q8NGC8 314 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 OR4D5Q8NGN0 318 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 DIRAS2Q96HU8 199 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 GPR82Q96P67 336 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 CIB3Q96Q77 187 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-213ENST00000530784 RSG1Q9BU20 258 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 TMEM147Q9BVK8 224 aa4.44□□□□□ -1.7
CSDE1-213ENST00000530784 BOLA2-SMG1P6H3BVE0 249 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 CRXO43186 299 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-213ENST00000530784 PITX3O75364 302 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 MED6O75586 246 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 ATP5G1P05496 136 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 FAUP35544 74 aaKnown RBP4.43□□□□□ -1.7
CSDE1-213ENST00000530784 ATP5G3P48201 142 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 CCL18P55774 89 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 FGL1Q08830 312 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 SPCS2Q15005 226 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 RNF182Q8N6D2 247 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 ZNF738Q8NE65 137 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 ZNRF2Q8NHG8 242 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 RAB2BQ8WUD1 216 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 SDHCQ99643 169 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-213ENST00000530784 Q9H3A6 140 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 CCDC59Q9P031 241 aaKnown RBP4.43□□□□□ -1.7
CSDE1-213ENST00000530784 RSL24D1Q9UHA3 163 aaKnown RBP4.43□□□□□ -1.7
CSDE1-213ENST00000530784 RYR1P21817 5038 aa4.43□□□□□ -1.7
CSDE1-213ENST00000530784 TRAV12-2A0A075B6T6 113 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 TRAV8-2A0A0B4J237 113 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 PLAC8L1A1L4L8 177 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 SMCO3A2RU48 225 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 H3BMQ9 156 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 PANO1I0J062 215 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 WRBO00258 174 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 SYNGR2O43760 224 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 PRM2P04554 102 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 SLC25A6P12236 298 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 HTN1P15515 57 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 RPL7P18124 248 aaKnown RBP4.42□□□□□ -1.7
CSDE1-213ENST00000530784 RHOBP62745 196 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 HIST1H1AQ02539 215 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-213ENST00000530784 CLINT1Q14677 625 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 TMEM128Q5BJH2 165 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 SPANXN5Q5MJ07 72 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 ACOT7LQ6ZUV0 252 aa4.42□□□□□ -1.7
CSDE1-213ENST00000530784 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-213ENST00000530784 TMEM256Q8N2U0 113 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms