RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 PRR20EP86478 221 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 PRR20CP86479 221 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 PRR20DP86480 221 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 PRR20BP86481 221 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 PRR20AP86496 221 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 UTF1Q5T230 341 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 C9orf66Q5T8R8 295 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 Q6ZWC4 215 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 FANCMQ8IYD8 2048 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 PRSS29PA6NIE9 313 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 DYNAPQ8N1N2 210 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 RSPO3Q9BXY4 272 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-227ENST00000530748 IGLC7A0M8Q6 106 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 IGHV4-59P01825 116 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 KLF5Q13887 457 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-227ENST00000530748 WIPF2Q8TF74 440 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-227ENST00000530748 KLK5Q9Y337 293 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-227ENST00000530748 CCL24O00175 119 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 SPRNQ5BIV9 151 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 NOP10Q9NPE3 64 aaKnown RBP6.67□□□□□ -1.34
CTNND1-227ENST00000530748 SCRT2Q9NQ03 307 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 DKK4Q9UBT3 224 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 A0A096LPF7 62 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 K7EMI3 77 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 SIVA1O15304 175 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 C16orf74Q96GX8 76 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 C17orf77Q96MU5 243 aa6.67□□□□□ -1.34
CTNND1-227ENST00000530748 Q8NFD4 153 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 WIPF3A6NGB9 483 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 RNF152Q8N8N0 203 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 KLF2Q9Y5W3 355 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-227ENST00000530748 RALGAPA1Q6GYQ0 2036 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 F8W1H4 67 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 CRLF1O75462 422 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 ANGP03950 147 aaKnown RBP6.66□□□□□ -1.34
CTNND1-227ENST00000530748 SPANXDQ9BXN6 97 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 TPRP12270 2363 aaKnown RBP6.66□□□□□ -1.34
CTNND1-227ENST00000530748 K7EP34 96 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 GNRH2O43555 120 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 ZNF493Q6ZR52 646 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 BRWD1Q9NSI6 2320 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 U3KQE9 123 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 CENPVL3A0A0U1RRI6 287 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 NDUFS7O75251 213 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 GRNP28799 593 aaKnown RBP6.66□□□□□ -1.34
CTNND1-227ENST00000530748 DSCR8Q96T75 97 aa6.66□□□□□ -1.34
CTNND1-227ENST00000530748 MRPL35Q9NZE8 188 aaKnown RBP6.66□□□□□ -1.34
CTNND1-227ENST00000530748 DNAJC13O75165 2243 aa6.65□□□□□ -1.34
CTNND1-227ENST00000530748 F8VRH5 84 aa6.65□□□□□ -1.34
CTNND1-227ENST00000530748 NXPH4O95158 308 aa6.65□□□□□ -1.34
CTNND1-227ENST00000530748 ASPHD1Q5U4P2 390 aa6.65□□□□□ -1.34
CTNND1-227ENST00000530748 LENEPQ9Y5L5 61 aa6.65□□□□□ -1.34
CTNND1-227ENST00000530748 FGF6P10767 208 aa6.65□□□□□ -1.34
CTNND1-227ENST00000530748 HLA-DMBP28068 263 aa6.65□□□□□ -1.34
CTNND1-227ENST00000530748 C4orf48Q5BLP8 95 aa6.65□□□□□ -1.34
CTNND1-227ENST00000530748 GTSF1LQ9H1H1 148 aa6.65□□□□□ -1.34
CTNND1-227ENST00000530748 K7EQD1 137 aa6.65□□□□□ -1.34
CTNND1-227ENST00000530748 J3QQQ9 107 aa6.65□□□□□ -1.35
CTNND1-227ENST00000530748 UBE2BP63146 152 aa6.65□□□□□ -1.35
CTNND1-227ENST00000530748 RNF138Q8WVD3 245 aa6.65□□□□□ -1.35
CTNND1-227ENST00000530748 I3L2K1 104 aa6.65□□□□□ -1.35
CTNND1-227ENST00000530748 CLPSL2Q6UWE3 100 aa6.65□□□□□ -1.35
CTNND1-227ENST00000530748 ANAPC1Q9H1A4 1944 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 EGR2P11161 476 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-227ENST00000530748 PPDPFLQ8WWR9 84 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 HEATR5BQ9P2D3 2071 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 TRAV25A0A0B4J276 109 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 IGLC2P0DOY2 106 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 IGLC3P0DOY3 106 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 IGHV4-38-2P0DP08 117 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 SLURP1P55000 103 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 Q6ZSR3 168 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 UBL5Q9BZL1 73 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 PRO1854Q9UHT4 67 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 KNTC1P50748 2209 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 RNASE13Q5GAN3 156 aaKnown RBP6.64□□□□□ -1.35
CTNND1-227ENST00000530748 SUMO4Q6EEV6 95 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 FGF23Q9GZV9 251 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-227ENST00000530748 F6UB75 175 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 BVES-AS1Q5T3Y7 98 aa6.64□□□□□ -1.35
CTNND1-227ENST00000530748 HERV-K104P63124 156 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 RITA1Q96K30 269 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 SPANXA1Q9NS26 97 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-227ENST00000530748 A0A0J9YY99 117 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 IGKV2-29A2NJV5 120 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-227ENST00000530748 A0A1W2PPM0 123 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 WT1P19544 449 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-227ENST00000530748 SLC25A29Q8N8R3 303 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 AGPAT4-IT1Q9H0P7 198 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 IGKV2D-24A0A075B6R9 120 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 IGHV4-30-2A0A087WSY4 118 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 IGHV7-81A0A0B4J1V7 117 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 IGLL1P15814 213 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 C16orf54Q6UWD8 224 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 LYPD6BQ8NI32 183 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 CARD19Q96LW7 228 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 ICOSQ9Y6W8 199 aa6.63□□□□□ -1.35
CTNND1-227ENST00000530748 IGLV11-55A0A075B6I3 123 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms