RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 TRAV2A0A0B4J234 112 aa11.22□□□□□ -0.61
PUF60-212ENST00000528320 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
PUF60-212ENST00000528320 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
PUF60-212ENST00000528320 C1orf196B1AJZ1 125 aa11.22□□□□□ -0.61
PUF60-212ENST00000528320 OR11H12B2RN74 326 aa11.22□□□□□ -0.61
PUF60-212ENST00000528320 H3BTX0 84 aa11.22□□□□□ -0.61
PUF60-212ENST00000528320 APOHP02749 345 aaPredicted RBP11.22□□□□□ -0.61
PUF60-212ENST00000528320 MGST1P10620 155 aaKnown RBP11.22□□□□□ -0.61
PUF60-212ENST00000528320 FAM3BP58499 235 aaPredicted RBP11.22□□□□□ -0.61
PUF60-212ENST00000528320 RAB5BP61020 215 aa11.22□□□□□ -0.61
PUF60-212ENST00000528320 FAM210BQ96KR6 192 aa11.22□□□□□ -0.61
PUF60-212ENST00000528320 WFDC10AQ9H1F0 79 aa11.22□□□□□ -0.61
PUF60-212ENST00000528320 SAV1Q9H4B6 383 aaPredicted RBP11.22□□□□□ -0.61
PUF60-212ENST00000528320 SELENOKQ9Y6D0 94 aa11.22□□□□□ -0.61
PUF60-212ENST00000528320 IGHV3OR16-8A0A075B7F1 116 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 TRAV34A0A0B4J273 112 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 SOCS3O14543 225 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 CT45A10P0DMU9 189 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 ID1P41134 155 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 C16orf92Q96LL3 132 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 LINC00479Q96M42 142 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 SPAG8Q99932 426 aaPredicted RBP11.21□□□□□ -0.61
PUF60-212ENST00000528320 FAM110AQ9BQ89 295 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 GFRA4Q9GZZ7 299 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 SRD5A3Q9H8P0 318 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 RPH3ALQ9UNE2 315 aa11.21□□□□□ -0.61
PUF60-212ENST00000528320 C19orf71A6NCJ1 209 aa11.2□□□□□ -0.62
PUF60-212ENST00000528320 M0R3E3 92 aa11.2□□□□□ -0.62
PUF60-212ENST00000528320 ZNF207O43670 478 aaKnown RBP11.2□□□□□ -0.62
PUF60-212ENST00000528320 GATCO43716 136 aaKnown RBP11.2□□□□□ -0.62
PUF60-212ENST00000528320 C9orf47Q6ZRZ4 202 aa11.2□□□□□ -0.62
PUF60-212ENST00000528320 DAZAP1Q96EP5 407 aaKnown RBP11.2□□□□□ -0.62
PUF60-212ENST00000528320 SMIM27A0A1W2PRY6 76 aa11.19□□□□□ -0.62
PUF60-212ENST00000528320 ZNF705GA8MUZ8 300 aaPredicted RBP11.19□□□□□ -0.62
PUF60-212ENST00000528320 A8MWL6 223 aa11.19□□□□□ -0.62
PUF60-212ENST00000528320 SNRPCP09234 159 aaKnown RBP11.19□□□□□ -0.62
PUF60-212ENST00000528320 OR5I1Q13606 314 aa11.19□□□□□ -0.62
PUF60-212ENST00000528320 PRNTQ86SH4 94 aa11.19□□□□□ -0.62
PUF60-212ENST00000528320 GBGT1Q8N5D6 347 aa11.19□□□□□ -0.62
PUF60-212ENST00000528320 URGCP-MRPS24S4R325 110 aa11.19□□□□□ -0.62
PUF60-212ENST00000528320 TRAV8-2A0A0B4J237 113 aa11.18□□□□□ -0.62
PUF60-212ENST00000528320 P01737 135 aa11.18□□□□□ -0.62
PUF60-212ENST00000528320 ODF3L2Q3SX64 289 aa11.18□□□□□ -0.62
PUF60-212ENST00000528320 Q6AWC8 147 aa11.18□□□□□ -0.62
PUF60-212ENST00000528320 RBPMS2Q6ZRY4 209 aaKnown RBP11.18□□□□□ -0.62
PUF60-212ENST00000528320 NUDT10Q8NFP7 164 aa11.18□□□□□ -0.62
PUF60-212ENST00000528320 TSKUQ8WUA8 353 aa11.18□□□□□ -0.62
PUF60-212ENST00000528320 NUDT11Q96G61 164 aa11.18□□□□□ -0.62
PUF60-212ENST00000528320 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
PUF60-212ENST00000528320 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
PUF60-212ENST00000528320 TMA7Q9Y2S6 64 aaKnown RBP11.18□□□□□ -0.62
PUF60-212ENST00000528320 ALMS1Q8TCU4 4167 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 TGIF2-C20orf24A0A0A6YYL0 155 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 A0A1W2PPQ1 181 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 XKRY2A2RUG3 117 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 MT-ND6P03923 174 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 CXCL1P09341 107 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 RPS10P46783 165 aaKnown RBP11.17□□□□□ -0.62
PUF60-212ENST00000528320 PAFAH1B2P68402 229 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 TMEM78Q5T7P6 136 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 ATP5L2Q7Z4Y8 100 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 RNASE7Q9H1E1 156 aaKnown RBP11.17□□□□□ -0.62
PUF60-212ENST00000528320 RETNQ9HD89 108 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
PUF60-212ENST00000528320 TRAV8-1A0A0A6YYK1 113 aa11.16□□□□□ -0.62
PUF60-212ENST00000528320 IGHV3-66A0A0C4DH42 116 aa11.16□□□□□ -0.62
PUF60-212ENST00000528320 RPS20P60866 119 aaKnown RBP11.16□□□□□ -0.62
PUF60-212ENST00000528320 SMUG1Q53HV7 270 aa11.16□□□□□ -0.62
PUF60-212ENST00000528320 WDR73Q6P4I2 378 aa11.16□□□□□ -0.62
PUF60-212ENST00000528320 IGHV3OR16-13A0A075B7E8 117 aa11.15□□□□□ -0.62
PUF60-212ENST00000528320 IGHV3-49A0A0A0MS15 119 aa11.15□□□□□ -0.62
PUF60-212ENST00000528320 IGHV3-74A0A0B4J1X5 117 aa11.15□□□□□ -0.62
PUF60-212ENST00000528320 ZNF138P52744 262 aa11.15□□□□□ -0.62
PUF60-212ENST00000528320 FOXA3P55318 350 aaPredicted RBP11.15□□□□□ -0.62
PUF60-212ENST00000528320 SNRPD3P62318 126 aaKnown RBP11.15□□□□□ -0.62
PUF60-212ENST00000528320 FAM162BQ5T6X4 162 aa11.15□□□□□ -0.62
PUF60-212ENST00000528320 OR10J6PQ8NGY7 276 aa11.15□□□□□ -0.62
PUF60-212ENST00000528320 DCANP1Q8TF63 244 aa11.15□□□□□ -0.62
PUF60-212ENST00000528320 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
PUF60-212ENST00000528320 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
PUF60-212ENST00000528320 NHLRC2Q8NBF2 726 aa11.14□□□□□ -0.63
PUF60-212ENST00000528320 ZC2HC1AQ96GY0 325 aa11.14□□□□□ -0.63
PUF60-212ENST00000528320 ODF3Q96PU9 254 aa11.14□□□□□ -0.63
PUF60-212ENST00000528320 A0A1B0GW15 77 aa11.13□□□□□ -0.63
PUF60-212ENST00000528320 OR4C46A6NHA9 309 aa11.13□□□□□ -0.63
PUF60-212ENST00000528320 RPL11P62913 178 aaKnown RBP11.13□□□□□ -0.63
PUF60-212ENST00000528320 HIST1H1AQ02539 215 aaPredicted RBP11.13□□□□□ -0.63
PUF60-212ENST00000528320 PRR27Q6MZM9 219 aa11.13□□□□□ -0.63
PUF60-212ENST00000528320 ZNF738Q8NE65 137 aa11.13□□□□□ -0.63
PUF60-212ENST00000528320 GNB1LQ9BYB4 327 aa11.13□□□□□ -0.63
PUF60-212ENST00000528320 LOC102724200A0A096LPH7 203 aaPredicted RBP11.12□□□□□ -0.63
PUF60-212ENST00000528320 FABP5P3A8MUU1 101 aa11.12□□□□□ -0.63
PUF60-212ENST00000528320 K7EQG2 157 aa11.12□□□□□ -0.63
PUF60-212ENST00000528320 RNF182Q8N6D2 247 aa11.12□□□□□ -0.63
PUF60-212ENST00000528320 VGLL1Q99990 258 aa11.12□□□□□ -0.63
PUF60-212ENST00000528320 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
PUF60-212ENST00000528320 KIR2DL5BA0A0G2JN68 375 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms