RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 SLC17A3O00476 420 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 UBE2CO00762 179 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 GATCO43716 136 aaKnown RBP4.39□□□□□ -1.71
LINC01001-202ENST00000527683 MT-ND6P03923 174 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 BTF3P20290 206 aaKnown RBP4.39□□□□□ -1.71
LINC01001-202ENST00000527683 PSMB8P28062 276 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 BMI1P35226 326 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 GNG5P63218 68 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 PSG3Q16557 428 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 CASC10Q5T4H9 136 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 SAMD13Q5VXD3 122 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 RASL11AQ6T310 242 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 C18orf65Q6ZTR6 163 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 GOLT1AQ6ZVE7 132 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 TMEM183AQ8IXX5 376 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 ZFP82Q8N141 532 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 OR4B1Q8NGF8 309 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 OR4X2Q8NGF9 303 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 NOL4LQ96MY1 436 aaPredicted RBP4.39□□□□□ -1.71
LINC01001-202ENST00000527683 C12orf57Q99622 126 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 MCRIP2Q9BUT9 160 aaKnown RBP4.39□□□□□ -1.71
LINC01001-202ENST00000527683 C1orf43Q9BWL3 253 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 GPR61Q9BZJ8 451 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 LINC00527Q9UJ94 153 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 COX11Q9Y6N1 276 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 TENM3Q9P273 2699 aa4.39□□□□□ -1.71
LINC01001-202ENST00000527683 TRAV34A0A0B4J273 112 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 SMIM27A0A1W2PRY6 76 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 ZNF320A2RRD8 509 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 RBAKDNA6NC62 111 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 FAM231BA6NCW3 169 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 C5orf52A6NGY3 159 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 ZNF705GA8MUZ8 300 aaPredicted RBP4.38□□□□□ -1.71
LINC01001-202ENST00000527683 A8MWL6 223 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 H3BTX0 84 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST1H2BKO60814 126 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 P01737 135 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 TRGC2P03986 189 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 S100A8P05109 93 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST1H2BJP06899 126 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST1H2BOP23527 126 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST1H2BBP33778 126 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST1H2BDP58876 126 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST1H2BCP62807 126 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 OR5I1Q13606 314 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST2H2BEQ16778 126 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 ACTL10Q5JWF8 245 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.38□□□□□ -1.71
LINC01001-202ENST00000527683 WDR73Q6P4I2 378 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 C16orf54Q6UWD8 224 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 ATP5L2Q7Z4Y8 100 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 EXOC3-AS1Q8N2X6 119 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 GBGT1Q8N5D6 347 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST1H2BHQ93079 126 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 DAZAP1Q96EP5 407 aaKnown RBP4.38□□□□□ -1.71
LINC01001-202ENST00000527683 LINC00479Q96M42 142 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST1H2BNQ99877 126 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 HIST1H2BMQ99879 126 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 ASCL2Q99929 193 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 RNASE7Q9H1E1 156 aaKnown RBP4.38□□□□□ -1.71
LINC01001-202ENST00000527683 RPP21Q9H633 154 aaKnown RBP4.38□□□□□ -1.71
LINC01001-202ENST00000527683 ZNF331Q9NQX6 463 aaPredicted RBP4.38□□□□□ -1.71
LINC01001-202ENST00000527683 PEF1Q9UBV8 284 aaKnown RBP4.38□□□□□ -1.71
LINC01001-202ENST00000527683 TNFRSF18Q9Y5U5 241 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
LINC01001-202ENST00000527683 IGHV3-35A0A0C4DH35 117 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 C19orf71A6NCJ1 209 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 IZUMO1RA6ND01 250 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 ZNF785A8K8V0 405 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 K7EMT4 169 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 PHOX2AO14813 284 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 IGLV2-11P01706 119 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 SNRPCP09234 159 aaKnown RBP4.37□□□□□ -1.71
LINC01001-202ENST00000527683 TRGC1P0CF51 173 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 CT45A10P0DMU9 189 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 SNRPEP62304 92 aaKnown RBP4.37□□□□□ -1.71
LINC01001-202ENST00000527683 FAM106AQ4KMX7 169 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 KHDC1LQ5JSQ8 128 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 SAPCD1Q5SSQ6 148 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 Q6AWC8 147 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 PRR27Q6MZM9 219 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 COX8CQ7Z4L0 72 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 PRNTQ86SH4 94 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 GPHB5Q86YW7 130 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 RNF152Q8N8N0 203 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 NHLRC2Q8NBF2 726 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 MUC7Q8TAX7 377 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 MYOZ3Q8TDC0 251 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 TSKUQ8WUA8 353 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 GLMPQ8WWB7 406 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 DPF1Q92782 380 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 C17orf77Q96MU5 243 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 NDFIP1Q9BT67 221 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 GFRA4Q9GZZ7 299 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 DAZ1Q9NQZ3 744 aaKnown RBP4.37□□□□□ -1.71
LINC01001-202ENST00000527683 NAT8BQ9UHF3 227 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 PSG8Q9UQ74 426 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 SMAD5-AS1Q9Y6J3 95 aa4.37□□□□□ -1.71
LINC01001-202ENST00000527683 IGHV3OR16-8A0A075B7F1 116 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms