RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 HHLA3Q9XRX5 114 aa10.95□□□□□ -0.66
PTPRU-210ENST00000527027 FLG2Q5D862 2391 aaPredicted RBP10.94□□□□□ -0.66
PTPRU-210ENST00000527027 A0A1B0GVG6 124 aa10.94□□□□□ -0.66
PTPRU-210ENST00000527027 H0YIZ8 118 aa10.94□□□□□ -0.66
PTPRU-210ENST00000527027 IGHV3-53P01767 116 aa10.94□□□□□ -0.66
PTPRU-210ENST00000527027 CRYBA4P53673 196 aa10.94□□□□□ -0.66
PTPRU-210ENST00000527027 ICAM4Q14773 271 aa10.94□□□□□ -0.66
PTPRU-210ENST00000527027 IBA57Q5T440 356 aaKnown RBP10.94□□□□□ -0.66
PTPRU-210ENST00000527027 PRELID1Q9Y255 219 aa10.94□□□□□ -0.66
PTPRU-210ENST00000527027 FAM24AA6NFZ4 105 aa10.93□□□□□ -0.66
PTPRU-210ENST00000527027 HMSDA8MTL9 139 aa10.93□□□□□ -0.66
PTPRU-210ENST00000527027 PFDN1O60925 122 aa10.93□□□□□ -0.66
PTPRU-210ENST00000527027 SMR3BP02814 79 aaPredicted RBP10.93□□□□□ -0.66
PTPRU-210ENST00000527027 GPX1P07203 203 aa10.93□□□□□ -0.66
PTPRU-210ENST00000527027 NMBP08949 121 aa10.93□□□□□ -0.66
PTPRU-210ENST00000527027 RPL12P30050 165 aaKnown RBP10.93□□□□□ -0.66
PTPRU-210ENST00000527027 NEGR1Q7Z3B1 354 aa10.93□□□□□ -0.66
PTPRU-210ENST00000527027 HYLS1Q96M11 299 aa10.93□□□□□ -0.66
PTPRU-210ENST00000527027 C8orf49Q96NF6 230 aa10.93□□□□□ -0.66
PTPRU-210ENST00000527027 LY96Q9Y6Y9 160 aa10.93□□□□□ -0.66
PTPRU-210ENST00000527027 FXYD6-FXYD2A0A087WZ82 144 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 K7EP13 123 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 NDUFB4O95168 129 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 C1QBP02746 253 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 CRISP2P16562 243 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 GCSHP23434 173 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 RPL29P47914 159 aaKnown RBP10.92□□□□□ -0.66
PTPRU-210ENST00000527027 FHL2Q14192 279 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 AQP10Q96PS8 301 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 VGLL1Q99990 258 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 MRPL16Q9NX20 251 aaKnown RBP10.92□□□□□ -0.66
PTPRU-210ENST00000527027 TMEM14CQ9P0S9 112 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 TP53TG3Q9ULZ0 132 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 WDR83OSQ9Y284 106 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 TIMM9Q9Y5J7 89 aa10.92□□□□□ -0.66
PTPRU-210ENST00000527027 IGHV1OR15-1A0A075B7D0 117 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 RGS13O14921 159 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 CST7O76096 145 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 HIST1H1EP10412 219 aaKnown RBP10.91□□□□□ -0.66
PTPRU-210ENST00000527027 PDE6HQ13956 83 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 C9orf47Q6ZRZ4 202 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 MRPL32Q9BYC8 188 aaKnown RBP10.91□□□□□ -0.66
PTPRU-210ENST00000527027 SLC39A9Q9NUM3 307 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 UQCC1Q9NVA1 299 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 MSRB1Q9NZV6 116 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 MDFICQ9P1T7 246 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 TNFSF18Q9UNG2 199 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 HSPB11Q9Y547 144 aa10.91□□□□□ -0.66
PTPRU-210ENST00000527027 A0A0D9SG52 128 aa10.9□□□□□ -0.66
PTPRU-210ENST00000527027 IGSF23A1L1A6 192 aa10.9□□□□□ -0.66
PTPRU-210ENST00000527027 FAM229AH3BQW9 127 aa10.9□□□□□ -0.66
PTPRU-210ENST00000527027 TAAR5O14804 337 aa10.9□□□□□ -0.66
PTPRU-210ENST00000527027 EVI2AP22794 236 aa10.9□□□□□ -0.66
PTPRU-210ENST00000527027 ZNF345Q14585 488 aa10.9□□□□□ -0.66
PTPRU-210ENST00000527027 ZFP69Q49AA0 526 aa10.9□□□□□ -0.66
PTPRU-210ENST00000527027 ZFAND2AQ8N6M9 145 aa10.9□□□□□ -0.66
PTPRU-210ENST00000527027 ARPC5LQ9BPX5 153 aa10.9□□□□□ -0.66
PTPRU-210ENST00000527027 ARPC5O15511 151 aa10.89□□□□□ -0.67
PTPRU-210ENST00000527027 VWC2Q2TAL6 325 aa10.89□□□□□ -0.67
PTPRU-210ENST00000527027 Q5BKY6 102 aa10.89□□□□□ -0.67
PTPRU-210ENST00000527027 TMEM78Q5T7P6 136 aa10.89□□□□□ -0.67
PTPRU-210ENST00000527027 Q6ZQT7 251 aa10.89□□□□□ -0.67
PTPRU-210ENST00000527027 WFDC10BQ8IUB3 73 aa10.89□□□□□ -0.67
PTPRU-210ENST00000527027 EXOC3-AS1Q8N2X6 119 aa10.89□□□□□ -0.67
PTPRU-210ENST00000527027 TRGV4A0A0C4DH28 118 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 G3V3Q6 166 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 K7EQD1 137 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 PYYP10082 97 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 SRIP30626 198 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 ZNF266Q14584 549 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 PRR9Q5T870 116 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 IQCF2Q8IXL9 164 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 OR5C1Q8NGR4 320 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 AAMDCQ9H7C9 122 aa10.88□□□□□ -0.67
PTPRU-210ENST00000527027 IGKV2-40A0A087WW87 121 aaPredicted RBP10.87□□□□□ -0.67
PTPRU-210ENST00000527027 IGKV2D-40P01614 121 aaPredicted RBP10.87□□□□□ -0.67
PTPRU-210ENST00000527027 NHLH2Q02577 135 aa10.87□□□□□ -0.67
PTPRU-210ENST00000527027 ZNF415Q09FC8 603 aa10.87□□□□□ -0.67
PTPRU-210ENST00000527027 ATP5SQ99766 215 aa10.87□□□□□ -0.67
PTPRU-210ENST00000527027 KCNIP2Q9NS61 270 aa10.87□□□□□ -0.67
PTPRU-210ENST00000527027 ZNF492Q9P255 531 aa10.87□□□□□ -0.67
PTPRU-210ENST00000527027 BORCS7-ASMTA0A0B4J1R7 106 aa10.86□□□□□ -0.67
PTPRU-210ENST00000527027 UBE2L5PA0A1B0GUS4 154 aa10.86□□□□□ -0.67
PTPRU-210ENST00000527027 SMLR1H3BR10 107 aa10.86□□□□□ -0.67
PTPRU-210ENST00000527027 EIF5AP63241 154 aaKnown RBP10.86□□□□□ -0.67
PTPRU-210ENST00000527027 FAM122CQ6P4D5 195 aa10.86□□□□□ -0.67
PTPRU-210ENST00000527027 Q6ZSN1 163 aa10.86□□□□□ -0.67
PTPRU-210ENST00000527027 SCGB1C1Q8TD33 95 aa10.86□□□□□ -0.67
PTPRU-210ENST00000527027 KANTRA0A1W2PQU2 76 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 RNF222A6NCQ9 220 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 ORM1P02763 201 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 SFTA3P0C7M3 94 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 GYPEP15421 78 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 FGF7P21781 194 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 ZNF138P52744 262 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 C10orf126Q8N4M7 172 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 KCNRGQ8N5I3 272 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 OR10G4Q8NGN3 311 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 PCNPQ8WW12 178 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms