RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 PPT1P50897 306 aa12.32□□□□□ -0.44
LMX1B-203ENST00000526117 GNG5P63218 68 aa12.32□□□□□ -0.44
LMX1B-203ENST00000526117 PRR9Q5T870 116 aa12.32□□□□□ -0.44
LMX1B-203ENST00000526117 FAM222AQ5U5X8 452 aa12.32□□□□□ -0.44
LMX1B-203ENST00000526117 CCDC28AQ8IWP9 274 aa12.32□□□□□ -0.44
LMX1B-203ENST00000526117 TMEM75Q8N9X5 138 aa12.32□□□□□ -0.44
LMX1B-203ENST00000526117 SFT2D1Q8WV19 159 aa12.32□□□□□ -0.44
LMX1B-203ENST00000526117 HIST1H2BAQ96A08 127 aa12.32□□□□□ -0.44
LMX1B-203ENST00000526117 TRAV10A0A0B4J240 114 aa12.31□□□□□ -0.44
LMX1B-203ENST00000526117 J3KRW8 73 aa12.31□□□□□ -0.44
LMX1B-203ENST00000526117 RNASE4P34096 147 aaKnown RBP12.31□□□□□ -0.44
LMX1B-203ENST00000526117 TCTAP57738 103 aa12.31□□□□□ -0.44
LMX1B-203ENST00000526117 Q6ZTC4 211 aa12.31□□□□□ -0.44
LMX1B-203ENST00000526117 ZNF680Q8NEM1 530 aa12.31□□□□□ -0.44
LMX1B-203ENST00000526117 RPH3ALQ9UNE2 315 aa12.31□□□□□ -0.44
LMX1B-203ENST00000526117 TIMM8BQ9Y5J9 83 aaPredicted RBP12.31□□□□□ -0.44
LMX1B-203ENST00000526117 TRAV8-1A0A0A6YYK1 113 aa12.3□□□□□ -0.44
LMX1B-203ENST00000526117 IGLV2-11P01706 119 aa12.3□□□□□ -0.44
LMX1B-203ENST00000526117 PRM2P04554 102 aa12.3□□□□□ -0.44
LMX1B-203ENST00000526117 EMP1P54849 157 aa12.3□□□□□ -0.44
LMX1B-203ENST00000526117 EIF4E3Q8N5X7 224 aaKnown RBP12.3□□□□□ -0.44
LMX1B-203ENST00000526117 UBE2G2P60604 165 aa12.29□□□□□ -0.44
LMX1B-203ENST00000526117 FLI1Q01543 452 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-203ENST00000526117 TDRG1Q3Y452 100 aa12.29□□□□□ -0.44
LMX1B-203ENST00000526117 IBA57Q5T440 356 aaKnown RBP12.29□□□□□ -0.44
LMX1B-203ENST00000526117 LINC00612Q8N6U2 182 aa12.29□□□□□ -0.44
LMX1B-203ENST00000526117 C2CD4CQ8TF44 421 aa12.29□□□□□ -0.44
LMX1B-203ENST00000526117 TVP23CQ96ET8 276 aa12.29□□□□□ -0.44
LMX1B-203ENST00000526117 NDFIP1Q9BT67 221 aa12.29□□□□□ -0.44
LMX1B-203ENST00000526117 PSG8Q9UQ74 426 aa12.29□□□□□ -0.44
LMX1B-203ENST00000526117 PEX7O00628 323 aa12.28□□□□□ -0.44
LMX1B-203ENST00000526117 HTN1P15515 57 aa12.28□□□□□ -0.44
LMX1B-203ENST00000526117 DAZ2Q13117 558 aaKnown RBP12.28□□□□□ -0.44
LMX1B-203ENST00000526117 TREM1Q9NP99 234 aa12.28□□□□□ -0.44
LMX1B-203ENST00000526117 LYSTQ99698 3801 aa12.27□□□□□ -0.44
LMX1B-203ENST00000526117 IGHV1OR15-1A0A075B7D0 117 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 TRBV6-1A0A0K0K1D8 114 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 F6UZH7 168 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 TEX46H3BTG2 121 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 IFNA7P01567 189 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 DAD1P61803 113 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 SAPCD1Q5SSQ6 148 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 COX8CQ7Z4L0 72 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 C11orf72Q8NBR9 251 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 FAM210BQ96KR6 192 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 MANBALQ9NQG1 85 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 KLF12Q9Y4X4 402 aa12.27□□□□□ -0.45
LMX1B-203ENST00000526117 DEFB131BA0A096LNP1 70 aa12.26□□□□□ -0.45
LMX1B-203ENST00000526117 TRAV21A0A0B4J279 112 aa12.26□□□□□ -0.45
LMX1B-203ENST00000526117 LCE6AA0A183 80 aa12.26□□□□□ -0.45
LMX1B-203ENST00000526117 RGS13O14921 159 aa12.26□□□□□ -0.45
LMX1B-203ENST00000526117 TXNDC17Q9BRA2 123 aa12.26□□□□□ -0.45
LMX1B-203ENST00000526117 SNURFLB1AK76 121 aa12.25□□□□□ -0.45
LMX1B-203ENST00000526117 PAGE4O60829 102 aa12.25□□□□□ -0.45
LMX1B-203ENST00000526117 TCL1AP56279 114 aa12.25□□□□□ -0.45
LMX1B-203ENST00000526117 FMC1Q96HJ9 113 aa12.25□□□□□ -0.45
LMX1B-203ENST00000526117 C18orf15Q96N68 181 aa12.25□□□□□ -0.45
LMX1B-203ENST00000526117 CBY3A6NI87 242 aa12.24□□□□□ -0.45
LMX1B-203ENST00000526117 SMUG1Q53HV7 270 aa12.24□□□□□ -0.45
LMX1B-203ENST00000526117 CST9LP1Q5W188 147 aa12.24□□□□□ -0.45
LMX1B-203ENST00000526117 Q6ZQT7 251 aa12.24□□□□□ -0.45
LMX1B-203ENST00000526117 ZNF767PQ75MW2 155 aa12.24□□□□□ -0.45
LMX1B-203ENST00000526117 Q86TA4 180 aa12.24□□□□□ -0.45
LMX1B-203ENST00000526117 NOP10Q9NPE3 64 aaKnown RBP12.24□□□□□ -0.45
LMX1B-203ENST00000526117 ZFP30Q9Y2G7 519 aa12.24□□□□□ -0.45
LMX1B-203ENST00000526117 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
LMX1B-203ENST00000526117 PFN1P07737 140 aaKnown RBP12.23□□□□□ -0.45
LMX1B-203ENST00000526117 ATP5G3P48201 142 aa12.23□□□□□ -0.45
LMX1B-203ENST00000526117 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
LMX1B-203ENST00000526117 PRNTQ86SH4 94 aa12.23□□□□□ -0.45
LMX1B-203ENST00000526117 SGK494Q96LW2 274 aa12.23□□□□□ -0.45
LMX1B-203ENST00000526117 LINC00479Q96M42 142 aa12.23□□□□□ -0.45
LMX1B-203ENST00000526117 PLECQ15149 4684 aaKnown RBP12.22□□□□□ -0.45
LMX1B-203ENST00000526117 TRGV11A0A075B6L2 103 aa12.22□□□□□ -0.45
LMX1B-203ENST00000526117 ZNF415Q09FC8 603 aa12.22□□□□□ -0.45
LMX1B-203ENST00000526117 TMEM183BQ1AE95 376 aa12.22□□□□□ -0.45
LMX1B-203ENST00000526117 LGALS9BQ3B8N2 356 aa12.22□□□□□ -0.45
LMX1B-203ENST00000526117 KCNS1Q96KK3 526 aa12.22□□□□□ -0.45
LMX1B-203ENST00000526117 C8orf49Q96NF6 230 aa12.22□□□□□ -0.45
LMX1B-203ENST00000526117 RYR2Q92736 4967 aa12.21□□□□□ -0.45
LMX1B-203ENST00000526117 TRAV34A0A0B4J273 112 aa12.21□□□□□ -0.45
LMX1B-203ENST00000526117 SPINK4O60575 86 aa12.21□□□□□ -0.45
LMX1B-203ENST00000526117 GCGP01275 180 aa12.21□□□□□ -0.45
LMX1B-203ENST00000526117 LTAP01374 205 aa12.21□□□□□ -0.45
LMX1B-203ENST00000526117 TAGLN2P37802 199 aaKnown RBP12.21□□□□□ -0.45
LMX1B-203ENST00000526117 NKX2-5P52952 324 aaPredicted RBP12.21□□□□□ -0.45
LMX1B-203ENST00000526117 CCL20P78556 96 aa12.21□□□□□ -0.45
LMX1B-203ENST00000526117 GSN-AS1Q9NRJ2 163 aa12.21□□□□□ -0.45
LMX1B-203ENST00000526117 APLNQ9ULZ1 77 aa12.21□□□□□ -0.45
LMX1B-203ENST00000526117 IGHV4-4A0A075B6R2 117 aa12.2□□□□□ -0.46
LMX1B-203ENST00000526117 A0A1B0GV50 99 aa12.2□□□□□ -0.46
LMX1B-203ENST00000526117 IGLL5B9A064 214 aa12.2□□□□□ -0.46
LMX1B-203ENST00000526117 ATP5G1P05496 136 aa12.2□□□□□ -0.46
LMX1B-203ENST00000526117 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
LMX1B-203ENST00000526117 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
LMX1B-203ENST00000526117 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
LMX1B-203ENST00000526117 UBE2G1P62253 170 aa12.2□□□□□ -0.46
LMX1B-203ENST00000526117 LYPD6BQ8NI32 183 aa12.2□□□□□ -0.46
LMX1B-203ENST00000526117 LINC00476Q8WZB0 136 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms