RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 OR8I2Q8N0Y5 310 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 WFDC9Q8NEX5 89 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 OR10G4Q8NGN3 311 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 OR10G9Q8NGN4 311 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 OR10G7Q8NGN6 311 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 STOML3Q8TAV4 291 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 MARC2Q969Z3 335 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 ISOC2Q96AB3 205 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 ZNF414Q96IQ9 312 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 PFDN5Q99471 154 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 RNF2Q99496 336 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 RHPN1-AS1Q9BWJ2 59 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 ACTR3CQ9C0K3 210 aaPredicted RBP3.31□□□□□ -1.88
USP48-211ENST00000526044 SH3BGRL3Q9H299 93 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 DAZ1Q9NQZ3 744 aaKnown RBP3.31□□□□□ -1.88
USP48-211ENST00000526044 DOK5Q9P104 306 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 SMPXQ9UHP9 88 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
USP48-211ENST00000526044 NF1P21359 2839 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 IGHV3OR16-13A0A075B7E8 117 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 IGHV3-74A0A0B4J1X5 117 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 TRAV5A0A0B4J249 113 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 IGHV3-66A0A0C4DH42 116 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 TMEM213A2RRL7 107 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 ZNF98A6NK75 572 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 A8MWP6 167 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 SEC14L6B5MCN3 397 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 CD5P06127 495 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 SULT1A2P50226 295 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 RAB5CP51148 216 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 TAS2R45P59539 299 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 RHOBP62745 196 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 DEFB114Q30KQ6 69 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 GCSAMLQ5JQS6 135 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 C1orf194Q5T5A4 169 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 TEX261Q6UWH6 196 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 DPPA3Q6W0C5 159 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 IL34Q6ZMJ4 242 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 MIR17HGQ75NE6 70 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 RPP25LQ8N5L8 163 aaKnown RBP3.3□□□□□ -1.88
USP48-211ENST00000526044 DYNLRB2Q8TF09 96 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 BAALCQ8WXS3 180 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 PHYHIPLQ96FC7 376 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 SHANK2-AS3Q9BTD1 123 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 MRPL32Q9BYC8 188 aaKnown RBP3.3□□□□□ -1.88
USP48-211ENST00000526044 SLC25A39Q9BZJ4 359 aaPredicted RBP3.3□□□□□ -1.88
USP48-211ENST00000526044 VSIRQ9H7M9 311 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 SLC25A22Q9H936 323 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 RETNQ9HD89 108 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 RPRMQ9NS64 109 aa3.3□□□□□ -1.88
USP48-211ENST00000526044 FBN1P35555 2871 aaKnown RBP3.3□□□□□ -1.88
USP48-211ENST00000526044 TEP1Q99973 2627 aaKnown RBP3.3□□□□□ -1.88
USP48-211ENST00000526044 MAST4O15021 2626 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 H3BRN7 92 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 K7EN84 100 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 SOCS3O14543 225 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 HMGB3O15347 200 aaKnown RBP3.29□□□□□ -1.88
USP48-211ENST00000526044 IFNA7P01567 189 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 IGLL1P15814 213 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 RPL7P18124 248 aaKnown RBP3.29□□□□□ -1.88
USP48-211ENST00000526044 GALR1P47211 349 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 INSL3P51460 131 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 RAB2AP61019 212 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 RAB14P61106 215 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 PAFAH1B2P68402 229 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 C9orf66Q5T8R8 295 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 SPATA31B1PQ5VZV4 182 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 LEMD1Q68G75 181 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 ALKAL2Q6UX46 152 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 ADAMTSL5Q6ZMM2 481 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 TCF24Q7RTU0 167 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 BPIFA4PQ86YQ2 179 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 ZNF680Q8NEM1 530 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 FAM213BQ8TBF2 198 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 GPR82Q96P67 336 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 SCRT1Q9BWW7 348 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 NRN1Q9NPD7 142 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 MLXQ9UH92 298 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 FUT9Q9Y231 359 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 SELENOKQ9Y6D0 94 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 C2CD3Q4AC94 2353 aa3.29□□□□□ -1.88
USP48-211ENST00000526044 IGKV3-7A0A075B6H7 116 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 CTXND1A0A1B0GTU2 59 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 ZNF705EA8MWA4 302 aaPredicted RBP3.28□□□□□ -1.88
USP48-211ENST00000526044 DNASE2O00115 360 aaPredicted RBP3.28□□□□□ -1.88
USP48-211ENST00000526044 OR7C2O60412 319 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 EIF3GO75821 320 aaKnown RBP eCLIP3.28□□□□□ -1.88
USP48-211ENST00000526044 CXorf1O96002 111 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 IGLV1-51P01701 117 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 NBEAP1P0C6P0 100 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 HIST1H1EP10412 219 aaKnown RBP3.28□□□□□ -1.88
USP48-211ENST00000526044 CMC4P56277 68 aaPredicted RBP3.28□□□□□ -1.88
USP48-211ENST00000526044 GUK1Q16774 197 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 KHDC3LQ587J8 217 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 FAM74A1Q5RGS3 127 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 LCN15Q6UWW0 184 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 LINC00336Q6ZUF6 198 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 OR2K2Q8NGT1 345 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 SFT2D1Q8WV19 159 aa3.28□□□□□ -1.88
USP48-211ENST00000526044 MBD3L1Q8WWY6 194 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms