RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 SNX29P2Q8IUI4 249 aa2.35□□□□□ -2.03
USP47-206ENST00000525367 Q8N2B8 174 aa2.35□□□□□ -2.03
USP47-206ENST00000525367 NOP16Q9Y3C1 178 aaKnown RBP2.35□□□□□ -2.03
USP47-206ENST00000525367 ADAMTS7Q9UKP4 1686 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 POLEQ07864 2286 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 A6NN06 94 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 ATP6V1G2-DDX39BF2Z307 99 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 J3QLW9 94 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 CCL16O15467 120 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 AKAIN1P0CW23 69 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 COX7CP15954 63 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 KRTAP26-1Q6PEX3 210 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 C5orf17Q8NAS9 161 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 DPH3Q96FX2 82 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 C12orf57Q99622 126 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 SNRNP25Q9BV90 132 aaKnown RBP2.34□□□□□ -2.03
USP47-206ENST00000525367 KLK9Q9UKQ9 250 aa2.34□□□□□ -2.03
USP47-206ENST00000525367 STRCQ7RTU9 1775 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 MYO9BQ13459 2157 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 TRAV12-2A0A075B6T6 113 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 TRBV6-5A0A0K0K1A5 114 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 IDO2Q6ZQW0 420 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 Q6ZUT4 128 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 LINC00052Q96N35 136 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 TMEM106BQ9NUM4 274 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 MYOM3Q5VTT5 1437 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 FGD6Q6ZV73 1430 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 CDK5RAP2Q96SN8 1893 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 UHRF1BP1LA0JNW5 1464 aa2.33□□□□□ -2.04
USP47-206ENST00000525367 H3BRM9 83 aa2.32□□□□□ -2.04
USP47-206ENST00000525367 CORTO00230 105 aa2.32□□□□□ -2.04
USP47-206ENST00000525367 ZCCHC23Q6ZST2 131 aa2.32□□□□□ -2.04
USP47-206ENST00000525367 C3orf62Q6ZUJ4 267 aa2.32□□□□□ -2.04
USP47-206ENST00000525367 PP6455Q8WZ26 134 aa2.32□□□□□ -2.04
USP47-206ENST00000525367 REG4Q9BYZ8 158 aa2.32□□□□□ -2.04
USP47-206ENST00000525367 SCN3BQ9NY72 215 aa2.32□□□□□ -2.04
USP47-206ENST00000525367 TAS2R8Q9NYW2 309 aa2.32□□□□□ -2.04
USP47-206ENST00000525367 FAM135AQ9P2D6 1515 aa2.32□□□□□ -2.04
USP47-206ENST00000525367 BTG2P78543 158 aa2.31□□□□□ -2.04
USP47-206ENST00000525367 SLC25A26Q70HW3 274 aa2.31□□□□□ -2.04
USP47-206ENST00000525367 PATE1Q8WXA2 126 aa2.31□□□□□ -2.04
USP47-206ENST00000525367 ZNF518AQ6AHZ1 1483 aa2.31□□□□□ -2.04
USP47-206ENST00000525367 EIF4G3O43432 1585 aaKnown RBP2.31□□□□□ -2.04
USP47-206ENST00000525367 FANCMQ8IYD8 2048 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 TRGV2A0A075B6R0 118 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 C20orf202A1L168 122 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 SNAPC5O75971 98 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 IGHV3-33P01772 117 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 ADCYAP1P18509 176 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 MIC13Q5XKP0 118 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 VSTM2AQ8TAG5 236 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 NAA60Q9H7X0 242 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 MGAMO43451 1857 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 NCKAP5O14513 1909 aa2.3□□□□□ -2.04
USP47-206ENST00000525367 LTBP2Q14767 1821 aa2.29□□□□□ -2.04
USP47-206ENST00000525367 TRAV2A0A0B4J234 112 aa2.29□□□□□ -2.04
USP47-206ENST00000525367 LOC100130705A0A1B0GUX0 176 aa2.29□□□□□ -2.04
USP47-206ENST00000525367 A0A1W2PRS3 328 aa2.29□□□□□ -2.04
USP47-206ENST00000525367 GEMIN2O14893 280 aaKnown RBP2.29□□□□□ -2.04
USP47-206ENST00000525367 RNASE3P12724 160 aaKnown RBP2.29□□□□□ -2.04
USP47-206ENST00000525367 GNG4P50150 75 aa2.29□□□□□ -2.04
USP47-206ENST00000525367 Q6ZRN7 208 aaPredicted RBP2.29□□□□□ -2.04
USP47-206ENST00000525367 DYNLRB2Q8TF09 96 aa2.29□□□□□ -2.04
USP47-206ENST00000525367 SPANXDQ9BXN6 97 aa2.29□□□□□ -2.04
USP47-206ENST00000525367 MPDZO75970 2070 aa2.29□□□□□ -2.04
USP47-206ENST00000525367 HEATR5BQ9P2D3 2071 aa2.29□□□□□ -2.04
USP47-206ENST00000525367 RIMS1Q86UR5 1692 aaKnown RBP2.28□□□□□ -2.04
USP47-206ENST00000525367 TRBV6-4A0A1B0GX49 114 aa2.28□□□□□ -2.04
USP47-206ENST00000525367 HIST1H1DP16402 221 aaKnown RBP2.28□□□□□ -2.04
USP47-206ENST00000525367 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.28□□□□□ -2.04
USP47-206ENST00000525367 PLPP5Q8NEB5 264 aa2.28□□□□□ -2.04
USP47-206ENST00000525367 AGPAT4-IT1Q9H0P7 198 aa2.28□□□□□ -2.04
USP47-206ENST00000525367 CDC42SE1Q9NRR8 79 aa2.28□□□□□ -2.04
USP47-206ENST00000525367 SNURFQ9Y675 71 aa2.28□□□□□ -2.04
USP47-206ENST00000525367 ZFHX2Q9C0A1 2572 aaPredicted RBP2.28□□□□□ -2.04
USP47-206ENST00000525367 TANC2Q9HCD6 1990 aa2.27□□□□□ -2.05
USP47-206ENST00000525367 NUPR1O60356 82 aa2.27□□□□□ -2.05
USP47-206ENST00000525367 PITX3O75364 302 aa2.27□□□□□ -2.05
USP47-206ENST00000525367 POLR2JP52435 117 aaKnown RBP2.27□□□□□ -2.05
USP47-206ENST00000525367 RHOHQ15669 191 aa2.27□□□□□ -2.05
USP47-206ENST00000525367 OR2T2Q6IF00 324 aa2.27□□□□□ -2.05
USP47-206ENST00000525367 PPP3R2Q96LZ3 170 aa2.27□□□□□ -2.05
USP47-206ENST00000525367 SEC11CQ9BY50 192 aa2.27□□□□□ -2.05
USP47-206ENST00000525367 MED9Q9NWA0 146 aa2.27□□□□□ -2.05
USP47-206ENST00000525367 BOKQ9UMX3 212 aaPredicted RBP2.27□□□□□ -2.05
USP47-206ENST00000525367 BCL9LQ86UU0 1499 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 MBD5Q9P267 1494 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 DIDO1Q9BTC0 2240 aaKnown RBP2.26□□□□□ -2.05
USP47-206ENST00000525367 LAMB4A4D0S4 1761 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 NUMA1Q14980 2115 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 NALCNQ8IZF0 1738 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 CCDC179H3BU77 68 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 MRPS14O60783 128 aaKnown RBP2.26□□□□□ -2.05
USP47-206ENST00000525367 MPV17LQ2QL34 196 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 LINC00299Q6ZSB3 139 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 SPTSSAQ969W0 71 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 ZFP30Q9Y2G7 519 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 MYLKQ15746 1914 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 PLXNA3P51805 1871 aa2.26□□□□□ -2.05
USP47-206ENST00000525367 ZFC3H1O60293 1989 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms