RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 HIGD1CA8MV81 97 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 M0R3E3 92 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 SOCS3O14543 225 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 IGLL1P15814 213 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 HBBP68871 147 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 Q0VG73 95 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 BEAN1Q3B7T3 259 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 SMUG1Q53HV7 270 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 OR10J3Q5JRS4 329 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 PRNTQ86SH4 94 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 ZFP82Q8N141 532 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 KLHL30-AS1Q8NEE0 82 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 C4orf3Q8WVX3 66 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 ZC2HC1AQ96GY0 325 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 LINC00477Q96M19 166 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 ODF3Q96PU9 254 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 NEU1Q99519 415 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 ASCL2Q99929 193 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 SMPXQ9UHP9 88 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 RPH3ALQ9UNE2 315 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 MGAM2Q2M2H8 2515 aa5.35□□□□□ -1.55
VPS11-201ENST00000524454 TRAV8-1A0A0A6YYK1 113 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 TRAV8-2A0A0B4J237 113 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 H3BTX0 84 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 S100A2P29034 98 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 ID1P41134 155 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 ZNF138P52744 262 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 HIST1H1AQ02539 215 aaPredicted RBP5.34□□□□□ -1.55
VPS11-201ENST00000524454 TMEM78Q5T7P6 136 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 PRR27Q6MZM9 219 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 UNQ9165/PRO28630Q6UXU0 137 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 TMEM136Q6ZRR5 245 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 APRG1Q8IVJ8 170 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 HIST3H2BBQ8N257 126 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 NHLRC2Q8NBF2 726 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 NUP35Q8NFH5 326 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 RHPN1-AS1Q9BWJ2 59 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 CNFNQ9BYD5 112 aa5.34□□□□□ -1.55
VPS11-201ENST00000524454 IGHV3-35A0A0C4DH35 117 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 A0A1B0GUT8 65 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 FABP5P3A8MUU1 101 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 SNURFLB1AK76 121 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 TRBV12-3P01733 135 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 HOXD3P31249 432 aaPredicted RBP5.33□□□□□ -1.56
VPS11-201ENST00000524454 CTRLP40313 264 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 RIGQ13278 110 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 LINC00518Q8N0U6 118 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 LINC00482Q8N8I6 264 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 OR2D3Q8NGH3 330 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 BORCS7Q96B45 105 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 RAX2Q96IS3 184 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 C16orf92Q96LL3 132 aa5.33□□□□□ -1.56
VPS11-201ENST00000524454 IGKV2-40A0A087WW87 121 aaPredicted RBP5.32□□□□□ -1.56
VPS11-201ENST00000524454 TMEM213A2RRL7 107 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 F2Z2F3 143 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 SH2D1AO60880 128 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 IGKV2D-40P01614 121 aaPredicted RBP5.32□□□□□ -1.56
VPS11-201ENST00000524454 IGHV3-11P01762 117 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 APCSP02743 223 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 APOHP02749 345 aaPredicted RBP5.32□□□□□ -1.56
VPS11-201ENST00000524454 CRISP2P16562 243 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 CBLN1P23435 193 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 NDUFA6P56556 154 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 PAFAH1B2P68402 229 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 KLF5Q13887 457 aaPredicted RBP5.32□□□□□ -1.56
VPS11-201ENST00000524454 LINC00322Q6ZN03 302 aaPredicted RBP5.32□□□□□ -1.56
VPS11-201ENST00000524454 ZNF493Q6ZR52 646 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 OR10J6PQ8NGY7 276 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 GTSF1Q8WW33 167 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 TMEM18Q96B42 140 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 FAM19A4Q96LR4 140 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 SIGLEC8Q9NYZ4 499 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 PEMTQ9UBM1 199 aa5.32□□□□□ -1.56
VPS11-201ENST00000524454 DNAH3Q8TD57 4116 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 TMEM189A5PLL7 270 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 LINC01619G3V211 115 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 CCL24O00175 119 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 SNRPCP09234 159 aaKnown RBP5.31□□□□□ -1.56
VPS11-201ENST00000524454 IGLC6P0CF74 106 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 MED14OSP0DP75 135 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 CRIP1P50238 77 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 KRTAP10-11P60412 298 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 SNRPD3P62318 126 aaKnown RBP5.31□□□□□ -1.56
VPS11-201ENST00000524454 S100A12P80511 92 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 DCANP1Q8TF63 244 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 HIST1H2BLQ99880 126 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 VGLL1Q99990 258 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
VPS11-201ENST00000524454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.31□□□□□ -1.56
VPS11-201ENST00000524454 IGHV3OR16-8A0A075B7F1 116 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 TRAV25A0A0B4J276 109 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 IFITM10A6NMD0 228 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 CA1P00915 261 aaPredicted RBP5.3□□□□□ -1.56
VPS11-201ENST00000524454 OR5AL1P0C617 328 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 RAB4AP20338 218 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 AKR1D1P51857 326 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 TCL1AP56279 114 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 FHL3Q13643 280 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 KPRPQ5T749 579 aaPredicted RBP5.3□□□□□ -1.56
VPS11-201ENST00000524454 MRPL54Q6P161 138 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms