RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 COL7A1Q02388 2944 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 TRBV20OR9-2A0A075B6H5 130 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 KLLNB2CW77 178 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 AMBPP02760 352 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 DEFB135Q30KP9 77 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 CENPWQ5EE01 88 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 SAPCD1Q5SSQ6 148 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 GFI1BQ5VTD9 330 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 BAGE2Q86Y30 109 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 EIF4E3Q8N5X7 224 aaKnown RBP8.69□□□□□ -1.02
PVT1-215ENST00000522963 NDFIP1Q9BT67 221 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 ZFP30Q9Y2G7 519 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 DNAH9Q9NYC9 4486 aa8.69□□□□□ -1.02
PVT1-215ENST00000522963 TENM3Q9P273 2699 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 UBE2CO00762 179 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 IGLV2-8P01709 118 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 GPX1P07203 203 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 RBMY1A1P0DJD3 496 aaKnown RBP8.68□□□□□ -1.02
PVT1-215ENST00000522963 RBMY1CP0DJD4 496 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 RNASE4P34096 147 aaKnown RBP8.68□□□□□ -1.02
PVT1-215ENST00000522963 BTN1A1Q13410 526 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 RBMY1FQ15415 496 aaKnown RBP8.68□□□□□ -1.02
PVT1-215ENST00000522963 UQCC3Q6UW78 93 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 Q6ZQT7 251 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 TMEM183AQ8IXX5 376 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 NHLRC2Q8NBF2 726 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 CSNK1G2-AS1Q8NCQ2 148 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
PVT1-215ENST00000522963 C7orf71A4D174 169 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 PGPEP1LA6NFU8 196 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 C9JCJ5 164 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 INSP01308 110 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 SFTA3P0C7M3 94 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 GNG4P50150 75 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 ZNF80P51504 273 aaPredicted RBP8.67□□□□□ -1.02
PVT1-215ENST00000522963 SMUG1Q53HV7 270 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 COX8CQ7Z4L0 72 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 C1orf158Q8N1D5 194 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 ZC2HC1AQ96GY0 325 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 SMIM7Q9BQ49 75 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 C1QTNF4Q9BXJ3 329 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 NBEAL2Q6ZNJ1 2754 aa8.67□□□□□ -1.02
PVT1-215ENST00000522963 STAB2Q8WWQ8 2551 aa8.66□□□□□ -1.02
PVT1-215ENST00000522963 TRAV12-3A0A0B4J271 114 aa8.66□□□□□ -1.02
PVT1-215ENST00000522963 ZNF727A8MUV8 499 aa8.66□□□□□ -1.02
PVT1-215ENST00000522963 SPRY2O43597 315 aa8.66□□□□□ -1.02
PVT1-215ENST00000522963 GCGP01275 180 aa8.66□□□□□ -1.02
PVT1-215ENST00000522963 CRIP1P50238 77 aa8.66□□□□□ -1.02
PVT1-215ENST00000522963 SOHLH1Q5JUK2 328 aa8.66□□□□□ -1.02
PVT1-215ENST00000522963 Q6AWC8 147 aa8.66□□□□□ -1.02
PVT1-215ENST00000522963 OVOL2Q9BRP0 275 aa8.66□□□□□ -1.02
PVT1-215ENST00000522963 TMEM218A2RU14 115 aa8.65□□□□□ -1.02
PVT1-215ENST00000522963 ZNF324O75467 553 aaPredicted RBP8.65□□□□□ -1.02
PVT1-215ENST00000522963 MGST1P10620 155 aaKnown RBP8.65□□□□□ -1.02
PVT1-215ENST00000522963 FAM74A3Q4VXF1 159 aa8.65□□□□□ -1.02
PVT1-215ENST00000522963 Q6ZWC4 215 aa8.65□□□□□ -1.02
PVT1-215ENST00000522963 OCC1Q8TAD7 63 aa8.65□□□□□ -1.02
PVT1-215ENST00000522963 TRAV21A0A0B4J279 112 aa8.64□□□□□ -1.03
PVT1-215ENST00000522963 K7EN84 100 aa8.64□□□□□ -1.03
PVT1-215ENST00000522963 SLC7A5P1Q8MH63 180 aa8.64□□□□□ -1.03
PVT1-215ENST00000522963 RNF183Q96D59 192 aa8.64□□□□□ -1.03
PVT1-215ENST00000522963 SMIM12Q96EX1 92 aa8.64□□□□□ -1.03
PVT1-215ENST00000522963 C20orf144Q9BQM9 153 aa8.64□□□□□ -1.03
PVT1-215ENST00000522963 NIPSNAP3BQ9BS92 247 aa8.64□□□□□ -1.03
PVT1-215ENST00000522963 GOLT1BQ9Y3E0 138 aa8.64□□□□□ -1.03
PVT1-215ENST00000522963 LY96Q9Y6Y9 160 aa8.64□□□□□ -1.03
PVT1-215ENST00000522963 IGHV3OR16-12A0A075B7B8 117 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 SH2D1AO60880 128 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 PFN1P07737 140 aaKnown RBP8.63□□□□□ -1.03
PVT1-215ENST00000522963 ADCYAP1P18509 176 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 OR5I1Q13606 314 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 TMEM241Q24JQ0 296 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 ZFAND6Q6FIF0 208 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 PRR27Q6MZM9 219 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 ZNF705AQ6ZN79 300 aaPredicted RBP8.63□□□□□ -1.03
PVT1-215ENST00000522963 MUC7Q8TAX7 377 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 LINC01587Q99440 93 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 EDA2RQ9HAV5 297 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 C11orf21Q9P2W6 132 aa8.63□□□□□ -1.03
PVT1-215ENST00000522963 FABP5P3A8MUU1 101 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 H7BYZ3 331 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 PRM2P04554 102 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 RPL23P62829 140 aaKnown RBP8.62□□□□□ -1.03
PVT1-215ENST00000522963 NDUFA5Q16718 116 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 MUC21Q5SSG8 566 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 FAM162BQ5T6X4 162 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 LINC01551Q86U37 167 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 TMEM256Q8N2U0 113 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 TMEM208Q9BTX3 173 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 SDF2L1Q9HCN8 221 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 NAT8Q9UHE5 227 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 TP53TG1Q9Y2A0 90 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 X6R8D5 127 aa8.62□□□□□ -1.03
PVT1-215ENST00000522963 HUWE1Q7Z6Z7 4374 aaKnown RBP8.61□□□□□ -1.03
PVT1-215ENST00000522963 IGHV1OR15-1A0A075B7D0 117 aa8.61□□□□□ -1.03
PVT1-215ENST00000522963 A0A0J9YWU9 116 aa8.61□□□□□ -1.03
PVT1-215ENST00000522963 C19orf71A6NCJ1 209 aa8.61□□□□□ -1.03
PVT1-215ENST00000522963 ZNF705GA8MUZ8 300 aaPredicted RBP8.61□□□□□ -1.03
PVT1-215ENST00000522963 F8W036 122 aa8.61□□□□□ -1.03
PVT1-215ENST00000522963 ANXA2RQ3ZCQ2 193 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms