RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 hCG_2014768A0A024R1R8 64 aa12.57□□□□□ -0.4
CLK4-211ENST00000522556 GAGE12BA1L429 117 aa12.57□□□□□ -0.4
CLK4-211ENST00000522556 CBY3A6NI87 242 aa12.57□□□□□ -0.4
CLK4-211ENST00000522556 GAGE7O76087 117 aa12.57□□□□□ -0.4
CLK4-211ENST00000522556 GAGE12FP0CL80 117 aa12.57□□□□□ -0.4
CLK4-211ENST00000522556 GAGE12GP0CL81 117 aa12.57□□□□□ -0.4
CLK4-211ENST00000522556 GAGE12IP0CL82 117 aa12.57□□□□□ -0.4
CLK4-211ENST00000522556 UBE2G2P60604 165 aa12.57□□□□□ -0.4
CLK4-211ENST00000522556 Q6ZTI0 123 aa12.57□□□□□ -0.4
CLK4-211ENST00000522556 TCRAP04437 139 aa12.56□□□□□ -0.4
CLK4-211ENST00000522556 SUMO1P63165 101 aaKnown RBP12.56□□□□□ -0.4
CLK4-211ENST00000522556 FAM74A1Q5RGS3 127 aa12.56□□□□□ -0.4
CLK4-211ENST00000522556 EIF4E3Q8N5X7 224 aaKnown RBP12.56□□□□□ -0.4
CLK4-211ENST00000522556 C5orf17Q8NAS9 161 aa12.56□□□□□ -0.4
CLK4-211ENST00000522556 LINC00467Q9BRT7 94 aa12.56□□□□□ -0.4
CLK4-211ENST00000522556 ZNF471Q9BX82 626 aaPredicted RBP12.56□□□□□ -0.4
CLK4-211ENST00000522556 IGHV1OR15-1A0A075B7D0 117 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 TRBV7-9A0A0J9YWB2 115 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 MAP1LC3B2A6NCE7 125 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 SNURFLB1AK76 121 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 F5H768 121 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 RGS13O14921 159 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 IGLV2-11P01706 119 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 TMUB2Q71RG4 321 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 C8orf49Q96NF6 230 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 MAP1LC3BQ9GZQ8 125 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 TMEM167BQ9NRX6 74 aa12.55□□□□□ -0.4
CLK4-211ENST00000522556 A0A0D9SG52 128 aa12.54□□□□□ -0.4
CLK4-211ENST00000522556 ANXA2RQ3ZCQ2 193 aa12.54□□□□□ -0.4
CLK4-211ENST00000522556 Q6AWC8 147 aa12.54□□□□□ -0.4
CLK4-211ENST00000522556 TMED6Q8WW62 240 aa12.54□□□□□ -0.4
CLK4-211ENST00000522556 KANTRA0A1W2PQU2 76 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 ATP5G1P05496 136 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 HOXA5P20719 270 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 ATP5G3P48201 142 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 ZNF80P51504 273 aaPredicted RBP12.53□□□□□ -0.4
CLK4-211ENST00000522556 TCL1AP56279 114 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 LGALSLQ3ZCW2 172 aaPredicted RBP12.53□□□□□ -0.4
CLK4-211ENST00000522556 TCTE3Q8IZS6 198 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 ARL6IP6Q8N6S5 226 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 LINC00479Q96M42 142 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 NAGKQ9UJ70 344 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 LENEPQ9Y5L5 61 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 NACAE9PAV3 2078 aa12.53□□□□□ -0.4
CLK4-211ENST00000522556 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.41
CLK4-211ENST00000522556 A0A1B0GV50 99 aa12.52□□□□□ -0.41
CLK4-211ENST00000522556 FAM74A7A6NL05 159 aa12.52□□□□□ -0.41
CLK4-211ENST00000522556 DAZ2Q13117 558 aaKnown RBP12.52□□□□□ -0.41
CLK4-211ENST00000522556 ZNF680Q8NEM1 530 aa12.52□□□□□ -0.41
CLK4-211ENST00000522556 TREM1Q9NP99 234 aa12.52□□□□□ -0.41
CLK4-211ENST00000522556 MRPL16Q9NX20 251 aaKnown RBP12.52□□□□□ -0.41
CLK4-211ENST00000522556 MDFICQ9P1T7 246 aa12.52□□□□□ -0.41
CLK4-211ENST00000522556 EPDR1Q9UM22 224 aa12.52□□□□□ -0.41
CLK4-211ENST00000522556 TRGV1A0A0A0MS02 117 aa12.51□□□□□ -0.41
CLK4-211ENST00000522556 A0A1W2PRE2 83 aa12.51□□□□□ -0.41
CLK4-211ENST00000522556 SEC11BP0C7V7 166 aa12.51□□□□□ -0.41
CLK4-211ENST00000522556 CYB561D1Q8N8Q1 229 aa12.51□□□□□ -0.41
CLK4-211ENST00000522556 FAM213BQ8TBF2 198 aa12.51□□□□□ -0.41
CLK4-211ENST00000522556 C11orf21Q9P2W6 132 aa12.51□□□□□ -0.41
CLK4-211ENST00000522556 PSG8Q9UQ74 426 aa12.51□□□□□ -0.41
CLK4-211ENST00000522556 SPINK4O60575 86 aa12.5□□□□□ -0.41
CLK4-211ENST00000522556 PFDN1O60925 122 aa12.5□□□□□ -0.41
CLK4-211ENST00000522556 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
CLK4-211ENST00000522556 TMEM183BQ1AE95 376 aa12.5□□□□□ -0.41
CLK4-211ENST00000522556 IBA57Q5T440 356 aaKnown RBP12.5□□□□□ -0.41
CLK4-211ENST00000522556 PRNTQ86SH4 94 aa12.5□□□□□ -0.41
CLK4-211ENST00000522556 TMEM183AQ8IXX5 376 aa12.5□□□□□ -0.41
CLK4-211ENST00000522556 FAM210BQ96KR6 192 aa12.5□□□□□ -0.41
CLK4-211ENST00000522556 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
CLK4-211ENST00000522556 DNAH6Q9C0G6 4158 aa12.5□□□□□ -0.41
CLK4-211ENST00000522556 A0A1B0GVG6 124 aa12.49□□□□□ -0.41
CLK4-211ENST00000522556 GNRH2O43555 120 aa12.49□□□□□ -0.41
CLK4-211ENST00000522556 TMEM75Q8N9X5 138 aa12.49□□□□□ -0.41
CLK4-211ENST00000522556 EPPK1P58107 5090 aaKnown RBP12.49□□□□□ -0.41
CLK4-211ENST00000522556 A0A0J9YY99 117 aa12.48□□□□□ -0.41
CLK4-211ENST00000522556 PEX7O00628 323 aa12.48□□□□□ -0.41
CLK4-211ENST00000522556 ZNF415Q09FC8 603 aa12.48□□□□□ -0.41
CLK4-211ENST00000522556 OR5I1Q13606 314 aa12.48□□□□□ -0.41
CLK4-211ENST00000522556 POM121L12Q8N7R1 296 aa12.48□□□□□ -0.41
CLK4-211ENST00000522556 MUC4Q99102 2169 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 TRAV26-1A0A087WT03 109 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 SERTM2A0A1B0GWG4 89 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 NUDT3O95989 172 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 IFNA7P01567 189 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 IGHV3-53P01767 116 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 C1QBP02746 253 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 TYMSP04818 313 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 P0DMU3 169 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 FAM231AP0DMU4 169 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 FAM231CP0DMU5 169 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 TPT1P13693 172 aaKnown RBP12.47□□□□□ -0.41
CLK4-211ENST00000522556 FAM159AQ6UWV7 190 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 STOML3Q8TAV4 291 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 SFT2D1Q8WV19 159 aa12.47□□□□□ -0.41
CLK4-211ENST00000522556 TRGV2A0A075B6R0 118 aa12.46□□□□□ -0.41
CLK4-211ENST00000522556 TRAV21A0A0B4J279 112 aa12.46□□□□□ -0.41
CLK4-211ENST00000522556 GCGP01275 180 aa12.46□□□□□ -0.41
CLK4-211ENST00000522556 TDRG1Q3Y452 100 aa12.46□□□□□ -0.41
CLK4-211ENST00000522556 Q86TA4 180 aa12.46□□□□□ -0.41
CLK4-211ENST00000522556 MBD3L1Q8WWY6 194 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms