RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SNAPINO95295 136 aa9.66□□□□□ -0.86
CPNE3-205ENST00000522240 GCGP01275 180 aa9.66□□□□□ -0.86
CPNE3-205ENST00000522240 LEPP41159 167 aa9.66□□□□□ -0.86
CPNE3-205ENST00000522240 RHEBQ15382 184 aa9.66□□□□□ -0.86
CPNE3-205ENST00000522240 ACTL10Q5JWF8 245 aa9.66□□□□□ -0.86
CPNE3-205ENST00000522240 APRG1Q8IVJ8 170 aa9.66□□□□□ -0.86
CPNE3-205ENST00000522240 ISOC2Q96AB3 205 aa9.66□□□□□ -0.86
CPNE3-205ENST00000522240 M0R036 132 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 MGST1P10620 155 aaKnown RBP9.65□□□□□ -0.86
CPNE3-205ENST00000522240 TSPOP30536 169 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 ZNF124Q15973 351 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 SMUG1Q53HV7 270 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 AMTNQ6UX39 209 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 TRPT1Q86TN4 253 aaKnown RBP9.65□□□□□ -0.86
CPNE3-205ENST00000522240 STHQ8IWL8 128 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 ZFAND2AQ8N6M9 145 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 NHLRC2Q8NBF2 726 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 CLRN3Q8NCR9 226 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 OR4B1Q8NGF8 309 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 ZC2HC1AQ96GY0 325 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 C8orf49Q96NF6 230 aa9.65□□□□□ -0.86
CPNE3-205ENST00000522240 FAM231DQ6ZW35 169 aa9.64□□□□□ -0.87
CPNE3-205ENST00000522240 KLLNB2CW77 178 aa9.63□□□□□ -0.87
CPNE3-205ENST00000522240 AMBPP02760 352 aa9.63□□□□□ -0.87
CPNE3-205ENST00000522240 CDKN1BP46527 198 aa9.63□□□□□ -0.87
CPNE3-205ENST00000522240 SFRP2Q96HF1 295 aa9.63□□□□□ -0.87
CPNE3-205ENST00000522240 ASCL2Q99929 193 aa9.63□□□□□ -0.87
CPNE3-205ENST00000522240 WFDC10AQ9H1F0 79 aa9.63□□□□□ -0.87
CPNE3-205ENST00000522240 OSTCQ9NRP0 149 aa9.63□□□□□ -0.87
CPNE3-205ENST00000522240 AURKAIP1Q9NWT8 199 aaPredicted RBP9.63□□□□□ -0.87
CPNE3-205ENST00000522240 NOTCH3Q9UM47 2321 aa9.62□□□□□ -0.87
CPNE3-205ENST00000522240 SORL1Q92673 2214 aa9.62□□□□□ -0.87
CPNE3-205ENST00000522240 A0A087WWC5 75 aa9.62□□□□□ -0.87
CPNE3-205ENST00000522240 C19orf71A6NCJ1 209 aa9.62□□□□□ -0.87
CPNE3-205ENST00000522240 RBMY1BA6NDE4 496 aaKnown RBP9.62□□□□□ -0.87
CPNE3-205ENST00000522240 RBMY1EA6NEQ0 496 aaKnown RBP9.62□□□□□ -0.87
CPNE3-205ENST00000522240 PPP1R2P9O14990 202 aa9.62□□□□□ -0.87
CPNE3-205ENST00000522240 MT-ND4LP03901 98 aa9.62□□□□□ -0.87
CPNE3-205ENST00000522240 RBMY1DP0C7P1 496 aaKnown RBP9.62□□□□□ -0.87
CPNE3-205ENST00000522240 OR5I1Q13606 314 aa9.62□□□□□ -0.87
CPNE3-205ENST00000522240 FAM162BQ5T6X4 162 aa9.62□□□□□ -0.87
CPNE3-205ENST00000522240 Q6AWC8 147 aa9.62□□□□□ -0.87
CPNE3-205ENST00000522240 PRR27Q6MZM9 219 aa9.62□□□□□ -0.87
CPNE3-205ENST00000522240 TRAV21A0A0B4J279 112 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 G3V4G9 280 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 IGKV3-20P01619 116 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 GPX1P07203 203 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 PFN1P07737 140 aaKnown RBP9.61□□□□□ -0.87
CPNE3-205ENST00000522240 ERVFC1-1P60608 527 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 NUTF2P61970 127 aaKnown RBP9.61□□□□□ -0.87
CPNE3-205ENST00000522240 C21orf62-AS1Q17RA5 79 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 RNF212Q495C1 297 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 IBA57Q5T440 356 aaKnown RBP9.61□□□□□ -0.87
CPNE3-205ENST00000522240 PRR9Q5T870 116 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 Q8N1Y9 231 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 C15orf54Q8N8G6 183 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 CTDSP1Q9GZU7 261 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 CMYA5Q8N3K9 4069 aa9.61□□□□□ -0.87
CPNE3-205ENST00000522240 C7orf77A4D0Y5 90 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 C7orf71A4D174 169 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 FABP5P3A8MUU1 101 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 M0R2Z0 102 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 SH2D1AO60880 128 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 CRIP1P50238 77 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
CPNE3-205ENST00000522240 KRTAP10-11P60412 298 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 SPINK13Q1W4C9 94 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 CT83Q5H943 113 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 GFI1BQ5VTD9 330 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 MORN3Q6PF18 240 aaPredicted RBP9.6□□□□□ -0.87
CPNE3-205ENST00000522240 LINC00322Q6ZN03 302 aaPredicted RBP9.6□□□□□ -0.87
CPNE3-205ENST00000522240 DEFB125Q8N687 156 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 OR10G8Q8NGN5 311 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 DAZAP1Q96EP5 407 aaKnown RBP9.6□□□□□ -0.87
CPNE3-205ENST00000522240 RNASE7Q9H1E1 156 aaKnown RBP9.6□□□□□ -0.87
CPNE3-205ENST00000522240 SRD5A3Q9H8P0 318 aa9.6□□□□□ -0.87
CPNE3-205ENST00000522240 GATCO43716 136 aaKnown RBP9.59□□□□□ -0.87
CPNE3-205ENST00000522240 P01737 135 aa9.59□□□□□ -0.87
CPNE3-205ENST00000522240 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-205ENST00000522240 BTN1A1Q13410 526 aa9.59□□□□□ -0.87
CPNE3-205ENST00000522240 KPRPQ5T749 579 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-205ENST00000522240 NUDT10Q8NFP7 164 aa9.59□□□□□ -0.87
CPNE3-205ENST00000522240 NUDT11Q96G61 164 aa9.59□□□□□ -0.87
CPNE3-205ENST00000522240 C20orf144Q9BQM9 153 aa9.59□□□□□ -0.87
CPNE3-205ENST00000522240 RPS10P5Q9NQ39 176 aa9.59□□□□□ -0.87
CPNE3-205ENST00000522240 TMEM242Q9NWH2 141 aa9.59□□□□□ -0.87
CPNE3-205ENST00000522240 AGRNO00468 2067 aa9.59□□□□□ -0.87
CPNE3-205ENST00000522240 H7BYZ3 331 aa9.58□□□□□ -0.88
CPNE3-205ENST00000522240 CRXO43186 299 aaPredicted RBP9.58□□□□□ -0.88
CPNE3-205ENST00000522240 DEFA6Q01524 100 aa9.58□□□□□ -0.88
CPNE3-205ENST00000522240 ATRAIDQ6UW56 229 aa9.58□□□□□ -0.88
CPNE3-205ENST00000522240 C1QTNF4Q9BXJ3 329 aa9.58□□□□□ -0.88
CPNE3-205ENST00000522240 RPP21Q9H633 154 aaKnown RBP9.58□□□□□ -0.88
CPNE3-205ENST00000522240 V9GYV3 84 aa9.58□□□□□ -0.88
CPNE3-205ENST00000522240 ZNF705GA8MUZ8 300 aaPredicted RBP9.57□□□□□ -0.88
CPNE3-205ENST00000522240 J3KRW8 73 aa9.57□□□□□ -0.88
CPNE3-205ENST00000522240 INSP01308 110 aa9.57□□□□□ -0.88
CPNE3-205ENST00000522240 CXCL1P09341 107 aa9.57□□□□□ -0.88
CPNE3-205ENST00000522240 RNASE4P34096 147 aaKnown RBP9.57□□□□□ -0.88
CPNE3-205ENST00000522240 KIR3DS1Q14943 382 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms