RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 IGLV2-11P01706 119 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 S100A9P06702 114 aaKnown RBP6.72□□□□□ -1.33
CLK4-209ENST00000521621 GPX1P07203 203 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 FAM3BP58499 235 aaPredicted RBP6.72□□□□□ -1.33
CLK4-209ENST00000521621 SAPCD1Q5SSQ6 148 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 Q6ZTC4 211 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 SLC51BQ86UW2 128 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 CYB561D1Q8N8Q1 229 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 PLA2G2EQ9NZK7 142 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 DNAH6Q9C0G6 4158 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 MAP1LC3B2A6NCE7 125 aa6.71□□□□□ -1.33
CLK4-209ENST00000521621 GGTLC3B5MD39 225 aa6.71□□□□□ -1.33
CLK4-209ENST00000521621 SNRPCP09234 159 aaKnown RBP6.71□□□□□ -1.33
CLK4-209ENST00000521621 AZU1P20160 251 aa6.71□□□□□ -1.33
CLK4-209ENST00000521621 TCL1AP56279 114 aa6.71□□□□□ -1.33
CLK4-209ENST00000521621 MAP1LC3BQ9GZQ8 125 aa6.71□□□□□ -1.33
CLK4-209ENST00000521621 IGHV1OR15-1A0A075B7D0 117 aa6.71□□□□□ -1.34
CLK4-209ENST00000521621 SPINK4O60575 86 aa6.71□□□□□ -1.34
CLK4-209ENST00000521621 ZNF471Q9BX82 626 aaPredicted RBP6.71□□□□□ -1.34
CLK4-209ENST00000521621 DEFB131BA0A096LNP1 70 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 DEFB4AO15263 64 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 CD300CQ08708 224 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 PIK3CD-AS1Q5SR53 167 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 DNLZQ5SXM8 178 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 PRR9Q5T870 116 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 C15orf53Q8NAA6 179 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 SPXQ9BT56 116 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 NDFIP1Q9BT67 221 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 TRGV11A0A075B6L2 103 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 IGHV3OR16-12A0A075B7B8 117 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 TRAV12-3A0A0B4J271 114 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 TRAV21A0A0B4J279 112 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 PFDN1O60925 122 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 SULT1A2P50226 295 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 DAD1P61803 113 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 IQCF2Q8IXL9 164 aa6.7□□□□□ -1.34
CLK4-209ENST00000521621 CIDEAO60543 219 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 RNASE4P34096 147 aaKnown RBP6.69□□□□□ -1.34
CLK4-209ENST00000521621 TAGLN2P37802 199 aaKnown RBP6.69□□□□□ -1.34
CLK4-209ENST00000521621 BTN1A1Q13410 526 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 KIR3DS1Q14943 382 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 C9orf62Q8N4C0 152 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 FMC1Q96HJ9 113 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 KCNS1Q96KK3 526 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 ZFP30Q9Y2G7 519 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 IGHV4-4A0A075B6R2 117 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 F6UZH7 168 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 GOLT1AQ6ZVE7 132 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 TVP23CQ96ET8 276 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 MANBALQ9NQG1 85 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 PSG8Q9UQ74 426 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 SNURFLB1AK76 121 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 ATP5G1P05496 136 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 ATP5G3P48201 142 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 SUMO1P63165 101 aaKnown RBP6.69□□□□□ -1.34
CLK4-209ENST00000521621 FLI1Q01543 452 aaPredicted RBP6.69□□□□□ -1.34
CLK4-209ENST00000521621 ZNF415Q09FC8 603 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 RNF212Q495C1 297 aa6.69□□□□□ -1.34
CLK4-209ENST00000521621 NBEAL2Q6ZNJ1 2754 aa6.68□□□□□ -1.34
CLK4-209ENST00000521621 PEX7O00628 323 aa6.68□□□□□ -1.34
CLK4-209ENST00000521621 TEX46H3BTG2 121 aa6.68□□□□□ -1.34
CLK4-209ENST00000521621 RGS13O14921 159 aa6.68□□□□□ -1.34
CLK4-209ENST00000521621 HMGB3O15347 200 aaKnown RBP6.68□□□□□ -1.34
CLK4-209ENST00000521621 H2AFB1P0C5Y9 115 aa6.68□□□□□ -1.34
CLK4-209ENST00000521621 TMEM183BQ1AE95 376 aa6.68□□□□□ -1.34
CLK4-209ENST00000521621 SMIM12Q96EX1 92 aa6.68□□□□□ -1.34
CLK4-209ENST00000521621 P0DMU3 169 aa6.67□□□□□ -1.34
CLK4-209ENST00000521621 FAM231AP0DMU4 169 aa6.67□□□□□ -1.34
CLK4-209ENST00000521621 FAM231CP0DMU5 169 aa6.67□□□□□ -1.34
CLK4-209ENST00000521621 Q8TAT8 98 aa6.67□□□□□ -1.34
CLK4-209ENST00000521621 C11orf52Q96A22 123 aa6.67□□□□□ -1.34
CLK4-209ENST00000521621 TREM1Q9NP99 234 aa6.67□□□□□ -1.34
CLK4-209ENST00000521621 PFN1P07737 140 aaKnown RBP6.67□□□□□ -1.34
CLK4-209ENST00000521621 GNG5P63218 68 aa6.67□□□□□ -1.34
CLK4-209ENST00000521621 SMUG1Q53HV7 270 aa6.67□□□□□ -1.34
CLK4-209ENST00000521621 RASL10AQ92737 203 aa6.67□□□□□ -1.34
CLK4-209ENST00000521621 KMT2CQ8NEZ4 4911 aaKnown RBP6.67□□□□□ -1.34
CLK4-209ENST00000521621 PLECQ15149 4684 aaKnown RBP6.67□□□□□ -1.34
CLK4-209ENST00000521621 SACSQ9NZJ4 4579 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 LTAP01374 205 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 CXCL1P09341 107 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 SLAQ13239 276 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 FAM159AQ6UWV7 190 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 Q86TA4 180 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 LYPD6BQ8NI32 183 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 FAM213BQ8TBF2 198 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 TMPRSS5Q9H3S3 457 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 NOP10Q9NPE3 64 aaKnown RBP6.66□□□□□ -1.34
CLK4-209ENST00000521621 RYR2Q92736 4967 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 ZFP69Q49AA0 526 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 SDF2L1Q9HCN8 221 aa6.66□□□□□ -1.34
CLK4-209ENST00000521621 IGHV3-16A0A0C4DH30 117 aa6.65□□□□□ -1.34
CLK4-209ENST00000521621 SFT2D1Q8WV19 159 aa6.65□□□□□ -1.34
CLK4-209ENST00000521621 IGLL5B9A064 214 aa6.65□□□□□ -1.35
CLK4-209ENST00000521621 EIF3GO75821 320 aaKnown RBP eCLIP6.65□□□□□ -1.35
CLK4-209ENST00000521621 BTF3P20290 206 aaKnown RBP6.65□□□□□ -1.35
CLK4-209ENST00000521621 EMP1P54849 157 aa6.65□□□□□ -1.35
CLK4-209ENST00000521621 C9orf85Q96MD7 179 aa6.65□□□□□ -1.35
CLK4-209ENST00000521621 FGF8P55075 233 aaPredicted RBP6.64□□□□□ -1.35
CLK4-209ENST00000521621 TMEM183AQ8IXX5 376 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms