RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 OR2J3O76001 311 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 HLA-DRB1P01911 266 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 S100A9P06702 114 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 SMIM6P0DI80 62 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 HIST1H1EP10412 219 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 MGST1P10620 155 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 ERVFC1-1P60608 527 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 YPEL3P61236 119 aaPredicted RBP5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 TMEM183BQ1AE95 376 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 PDZD11Q5EBL8 140 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 COA6Q5JTJ3 125 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 BAGE2Q86Y30 109 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 NHLRC2Q8NBF2 726 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 SYT8Q8NBV8 401 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 ZNF414Q96IQ9 312 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 BTF3L4Q96K17 158 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 SGK494Q96LW2 274 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 C17orf77Q96MU5 243 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 SHANK2-AS3Q9BTD1 123 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 Q9H3A6 140 aa5.36□□□□□ -1.55
CTNNA1-227ENST00000521387 TRAV30A0A087WSZ9 112 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 XKRY2A2RUG3 117 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 MRPS12O15235 138 aaKnown RBP5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 GATCO43716 136 aaKnown RBP5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 GNG7O60262 68 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 FABP1P07148 127 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 CD7P09564 240 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 HIST1H1BP16401 226 aaKnown RBP5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 FCGR2BP31994 310 aaPredicted RBP5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 TCTAP57738 103 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 NANOS2P60321 138 aaKnown RBP5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 KLK9Q2XQG4 91 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 Q56UQ5 140 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 UNQ5815/PRO19632Q6UWF5 114 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 GTSCR1Q86UQ5 136 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 OR8I2Q8N0Y5 310 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 OR10D4PQ8NGN7 298 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 RNF125Q96EQ8 232 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 TMEM68Q96MH6 324 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 TCEAL7Q9BRU2 100 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 OTORQ9NRC9 128 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 C21orf62Q9NYP8 219 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 MDFICQ9P1T7 246 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 FBXL7Q9UJT9 491 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 KLK9Q9UKQ9 250 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 RPH3ALQ9UNE2 315 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 KLF12Q9Y4X4 402 aa5.35□□□□□ -1.55
CTNNA1-227ENST00000521387 SMIM27A0A1W2PRY6 76 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 ZNF705GA8MUZ8 300 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 G3V318 75 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 ATP6V0E1O15342 81 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 SPINK4O60575 86 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 IL4P05112 153 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 FABP4P15090 132 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 CBLN1P23435 193 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 S100A2P29034 98 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 PPIFP30405 207 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 TCL1AP56279 114 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 USF2Q15853 346 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 IBA57Q5T440 356 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 FAM231DQ6ZW35 169 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 TMEM183AQ8IXX5 376 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 LYPD1Q8N2G4 141 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 EXOC3-AS1Q8N2X6 119 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 C5orf17Q8NAS9 161 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 NUDT10Q8NFP7 164 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 NUDT11Q96G61 164 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 GRAMD2BQ96HH9 432 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 NIT2Q9NQR4 276 aa5.34□□□□□ -1.55
CTNNA1-227ENST00000521387 TRBV19A0A075B6N1 114 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 OR2T8A6NH00 312 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 KRTAP29-1A8MX34 341 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 IGLL5B9A064 214 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 NUPR1O60356 82 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 CA1P00915 261 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 AMBPP02760 352 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 TCRAP04437 139 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 CTSGP08311 255 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 IGLC2P0DOY2 106 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 PRB4P10163 310 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 XGP55808 180 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 UBE2G1P62253 170 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 ECSCRQ19T08 205 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 PYY3Q5JQD4 70 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 TMEM136Q6ZRR5 245 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 TMEM256Q8N2U0 113 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 POM121L12Q8N7R1 296 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 ZNF502Q8TBZ5 544 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 VN1R17PQ8TDU5 208 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 FMC1Q96HJ9 113 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 GPR82Q96P67 336 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 TXN2Q99757 166 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 HIST1H2BLQ99880 126 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 ATG101Q9BSB4 218 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 CHRDL1Q9BU40 450 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 MLST8Q9BVC4 326 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 THYN1Q9P016 225 aa5.33□□□□□ -1.56
CTNNA1-227ENST00000521387 TRBV9A0A0B4J1U6 114 aa5.32□□□□□ -1.56
CTNNA1-227ENST00000521387 TRBV6-1A0A0K0K1D8 114 aa5.32□□□□□ -1.56
CTNNA1-227ENST00000521387 ZNF785A8K8V0 405 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms