RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 SCXQ7RTU7 201 aa4.03□□□□□ -1.76
CCDC6-203ENST00000518638 ZNF738Q8NE65 137 aa4.03□□□□□ -1.76
CCDC6-203ENST00000518638 ZNF680Q8NEM1 530 aa4.03□□□□□ -1.76
CCDC6-203ENST00000518638 VSIG2Q96IQ7 327 aa4.03□□□□□ -1.76
CCDC6-203ENST00000518638 SLC25A39Q9BZJ4 359 aaPredicted RBP4.03□□□□□ -1.76
CCDC6-203ENST00000518638 VCXQ9H320 206 aa4.03□□□□□ -1.76
CCDC6-203ENST00000518638 NDUFB11Q9NX14 153 aa4.03□□□□□ -1.76
CCDC6-203ENST00000518638 PRO0255Q9UI72 69 aa4.03□□□□□ -1.76
CCDC6-203ENST00000518638 RNF24Q9Y225 148 aa4.03□□□□□ -1.76
CCDC6-203ENST00000518638 ZNF324O75467 553 aaPredicted RBP4.02□□□□□ -1.77
CCDC6-203ENST00000518638 TSPAN13O95857 204 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 GNAO1P09471 354 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 OR5AC1P0C628 307 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 SRIP30626 198 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 ASIPP42127 132 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 KRTAP10-4P60372 401 aaPredicted RBP4.02□□□□□ -1.77
CCDC6-203ENST00000518638 HIST1H1AQ02539 215 aaPredicted RBP4.02□□□□□ -1.77
CCDC6-203ENST00000518638 TRIM16LQ309B1 348 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 MUC21Q5SSG8 566 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 GPR107Q5VW38 600 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 LYPD5Q6UWN5 251 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 S100A7AQ86SG5 101 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 OR8A1Q8NGG7 326 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 SLC35E1Q96K37 410 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 TXNDC17Q9BRA2 123 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 PYGO2Q9BRQ0 406 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 CHAC1Q9BUX1 264 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 PPDPFQ9H3Y8 114 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.02□□□□□ -1.77
CCDC6-203ENST00000518638 NUDT15Q9NV35 164 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 ANAPC10Q9UM13 185 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 U3KQ87 197 aa4.02□□□□□ -1.77
CCDC6-203ENST00000518638 CEBPZOSA8MTT3 80 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 IGKV1-5P01602 117 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 PMP2P02689 132 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 ORM1P02763 201 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 PRB4P10163 310 aaPredicted RBP4.01□□□□□ -1.77
CCDC6-203ENST00000518638 RPL37AP61513 92 aaKnown RBP4.01□□□□□ -1.77
CCDC6-203ENST00000518638 CYCSP99999 105 aaKnown RBP4.01□□□□□ -1.77
CCDC6-203ENST00000518638 C22orf42Q6IC83 251 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 Q6ZRU5 148 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 SH2D6Q7Z4S9 175 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 HSD17B11Q8NBQ5 300 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 RSG1Q9BU20 258 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 PARLQ9H300 379 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 SLC25A22Q9H936 323 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 FUT9Q9Y231 359 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 RCL1Q9Y2P8 373 aaKnown RBP4.01□□□□□ -1.77
CCDC6-203ENST00000518638 TMEM56-RWDD3S4R434 201 aa4.01□□□□□ -1.77
CCDC6-203ENST00000518638 LRP1Q07954 4544 aaKnown RBP4□□□□□ -1.77
CCDC6-203ENST00000518638 A0A0U1RQV1 116 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 C3orf85A0A1B0GTC6 90 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 MEIS3P1A6NDR6 274 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 IBA57-AS1B1ANH7 110 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 MBP02144 154 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 PGAM2P15259 253 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 GATA1P15976 413 aaPredicted RBP4□□□□□ -1.77
CCDC6-203ENST00000518638 RPL7P18124 248 aaKnown RBP4□□□□□ -1.77
CCDC6-203ENST00000518638 RCVRNP35243 200 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 HRH1P35367 487 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 GPX4P36969 197 aaPredicted RBP4□□□□□ -1.77
CCDC6-203ENST00000518638 NMSQ5H8A3 153 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 LINC01556Q5JQF7 62 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 Q6ZTI0 123 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 WFDC10BQ8IUB3 73 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 ARRDC1Q8N5I2 433 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 CCDC71LQ8N9Z2 235 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 LRRC20Q8TCA0 184 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 SLC25A38Q96DW6 304 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 S100A16Q96FQ6 103 aaKnown RBP4□□□□□ -1.77
CCDC6-203ENST00000518638 LINC00479Q96M42 142 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 TRGV9Q99603 122 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 VGLL1Q99990 258 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 TMEM147Q9BVK8 224 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 DUSP21Q9H596 190 aa4□□□□□ -1.77
CCDC6-203ENST00000518638 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 TRGV1A0A0A0MS02 117 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 C9JCJ5 164 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 MT1HL1P0DM35 61 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 CXCL2P19875 107 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 HNRNPA3P51991 378 aaKnown RBP3.99□□□□□ -1.77
CCDC6-203ENST00000518638 CRYBA4P53673 196 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 PIGPP57054 158 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 ZNF90Q03938 601 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 RNF182Q8N6D2 247 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 ZFAND1Q8TCF1 268 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 ODF3Q96PU9 254 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 TP53RKQ96S44 253 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 DPH3P1Q9H4G8 78 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 COPZ2Q9P299 210 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 HHLA3Q9XRX5 114 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 FAT3Q8TDW7 4589 aa3.99□□□□□ -1.77
CCDC6-203ENST00000518638 TRAV8-2A0A0B4J237 113 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 TRAV8-6A0A0B4J262 113 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 PIGBOS1A0A0B4J2F0 54 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 SNRPCP09234 159 aaKnown RBP3.98□□□□□ -1.77
CCDC6-203ENST00000518638 CXCL3P19876 107 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms