RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PFN1P07737 140 aaKnown RBP2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 RPL7P18124 248 aaKnown RBP2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 CXCL3P19876 107 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 HERV-K104P63124 156 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 FABP5Q01469 135 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 HIST1H1AQ02539 215 aaPredicted RBP2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 MLLT11Q13015 90 aaPredicted RBP2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 WFDC2Q14508 124 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 LRRC37A5PQ49AS3 106 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 SPINK9Q5DT21 86 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 IBA57Q5T440 356 aaKnown RBP2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 GPR107Q5VW38 600 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 AHSA2Q719I0 299 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 S100A7AQ86SG5 101 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 SLC7A5P1Q8MH63 180 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 EIF4E3Q8N5X7 224 aaKnown RBP2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 C11orf72Q8NBR9 251 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 ZNF738Q8NE65 137 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 ATP6V0E2Q8NHE4 81 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 BLNKQ8WV28 456 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 PCNPQ8WW12 178 aaKnown RBP2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 PYDC1Q8WXC3 89 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 MRGPRFQ96AM1 343 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 RMI2Q96E14 147 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 ACY3Q96HD9 319 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 ODF3Q96PU9 254 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 AUNIPQ9H7T9 357 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 Q9HAA7 133 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 S100A14Q9HCY8 104 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 C8orf4Q9NR00 106 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 EHFQ9NZC4 300 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 TMEM56-RWDD3S4R434 201 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 U3KQ87 197 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 IGKV1D-37A0A075B6S9 117 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 TRAV8-1A0A0A6YYK1 113 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 TRGV4A0A0C4DH28 118 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 TRDV1A0A1B0GX56 115 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 HSBP1L1C9JCN9 74 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 CIB2O75838 187 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 SLC25A5P05141 298 aaKnown RBP2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 SEC11BP0C7V7 166 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 MYL9P24844 172 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 LEPP41159 167 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 AKR1C2P52895 323 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 TCL1AP56279 114 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 TAS2R46P59540 309 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 RND3P61587 244 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 LYZP61626 148 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 SRPXP78539 464 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 ZNF90Q03938 601 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 ZNF846Q147U1 533 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 LINC01620Q4KN68 170 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 NMSQ5H8A3 153 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 LAIR2Q6ISS4 152 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 C8orf59Q8N0T1 100 aaPredicted RBP2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 DHRSXQ8N5I4 330 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 BPIFCQ8NFQ6 507 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 OR5H2Q8NGV7 314 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 LRRC20Q8TCA0 184 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 ZNF431Q8TF32 576 aaPredicted RBP2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 C11orf52Q96A22 123 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 RPUSD4Q96CM3 377 aaKnown RBP2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 TRGV9Q99603 122 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 MGLLQ99685 303 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 CHCHD5Q9BSY4 110 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 SLC25A31Q9H0C2 315 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 RHBDL2Q9NX52 303 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 SCN3BQ9NY72 215 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 TP53TG3Q9ULZ0 132 aa2.31□□□□□ -2.04
PDLIM5-218ENST00000513341 IGLV4-3A0A075B6K6 122 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 TRAV12-3A0A0B4J271 114 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 C3orf85A0A1B0GTC6 90 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 FABP12A6NFH5 140 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 CRYM-AS1A6NIL9 109 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 PANO1I0J062 215 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 MPDU1O75352 247 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 CDS2O95674 445 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 NMBP08949 121 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 STAG3L3P0CL85 134 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 CXCL2P19875 107 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 HRH1P35367 487 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 TSPAN5P62079 268 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 FGL1Q08830 312 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 COTL1Q14019 142 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 MEF2DQ14814 521 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 TRIM16LQ309B1 348 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 OR10J3Q5JRS4 329 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 REG3GQ6UW15 175 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 TMUB2Q71RG4 321 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 ARRDC1Q8N5I2 433 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 RNF182Q8N6D2 247 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 PACRGLQ8N7B6 248 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 C9orf163Q8N9P6 203 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 OR10G4Q8NGN3 311 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 OR10G9Q8NGN4 311 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 BAALCQ8WXS3 180 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 RASL10AQ92737 203 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 S100A16Q96FQ6 103 aaKnown RBP2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 RNF185Q96GF1 192 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 SLC35E1Q96K37 410 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms