RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 TRAV26-1A0A087WT03 109 aa9.58□□□□□ -0.88
SPCS3-204ENST00000513139 IGLC2P0DOY2 106 aa9.58□□□□□ -0.88
SPCS3-204ENST00000513139 ERVFC1-1P60608 527 aa9.58□□□□□ -0.88
SPCS3-204ENST00000513139 RHOBP62745 196 aa9.58□□□□□ -0.88
SPCS3-204ENST00000513139 ZNF493Q6ZR52 646 aa9.58□□□□□ -0.88
SPCS3-204ENST00000513139 BAP18Q8IXM2 172 aa9.58□□□□□ -0.88
SPCS3-204ENST00000513139 MRPL32Q9BYC8 188 aaKnown RBP9.58□□□□□ -0.88
SPCS3-204ENST00000513139 RNF24Q9Y225 148 aa9.58□□□□□ -0.88
SPCS3-204ENST00000513139 TRAV8-2A0A0B4J237 113 aa9.57□□□□□ -0.88
SPCS3-204ENST00000513139 A0A1W2PPV4 95 aa9.57□□□□□ -0.88
SPCS3-204ENST00000513139 MBP02144 154 aa9.57□□□□□ -0.88
SPCS3-204ENST00000513139 PRB4P10163 310 aaPredicted RBP9.57□□□□□ -0.88
SPCS3-204ENST00000513139 OR5I1Q13606 314 aa9.57□□□□□ -0.88
SPCS3-204ENST00000513139 LINC01587Q99440 93 aa9.57□□□□□ -0.88
SPCS3-204ENST00000513139 TMEM14CQ9P0S9 112 aa9.57□□□□□ -0.88
SPCS3-204ENST00000513139 A0A087X0K7 114 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 BOLA2-SMG1P6H3BVE0 249 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 SLC17A3O00476 420 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 OR10J4P0C629 311 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 TPT1P13693 172 aaKnown RBP9.56□□□□□ -0.88
SPCS3-204ENST00000513139 ICAM4Q14773 271 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 ZNF726P1Q15940 193 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 RNF182Q8N6D2 247 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 LINC00612Q8N6U2 182 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 STOML3Q8TAV4 291 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 BLNKQ8WV28 456 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 TMED6Q8WW62 240 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 RAB24Q969Q5 203 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 FXYD5Q96DB9 178 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 PAXXQ9BUH6 204 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 OR51M1Q9H341 326 aa9.56□□□□□ -0.88
SPCS3-204ENST00000513139 NOP10Q9NPE3 64 aaKnown RBP9.56□□□□□ -0.88
SPCS3-204ENST00000513139 TRAV12-2A0A075B6T6 113 aa9.55□□□□□ -0.88
SPCS3-204ENST00000513139 OR7C2O60412 319 aa9.55□□□□□ -0.88
SPCS3-204ENST00000513139 SEC11BP0C7V7 166 aa9.55□□□□□ -0.88
SPCS3-204ENST00000513139 HIST1H1EP10412 219 aaKnown RBP9.55□□□□□ -0.88
SPCS3-204ENST00000513139 CDC34P49427 236 aaPredicted RBP9.55□□□□□ -0.88
SPCS3-204ENST00000513139 FHITP49789 147 aa9.55□□□□□ -0.88
SPCS3-204ENST00000513139 KRTAP10-1P60331 282 aa9.55□□□□□ -0.88
SPCS3-204ENST00000513139 EIF5AP63241 154 aaKnown RBP9.55□□□□□ -0.88
SPCS3-204ENST00000513139 AKR1C8PQ5T2L2 129 aa9.55□□□□□ -0.88
SPCS3-204ENST00000513139 SLC51BQ86UW2 128 aa9.55□□□□□ -0.88
SPCS3-204ENST00000513139 LRRC20Q8TCA0 184 aa9.55□□□□□ -0.88
SPCS3-204ENST00000513139 RNASE8Q8TDE3 154 aaKnown RBP9.55□□□□□ -0.88
SPCS3-204ENST00000513139 TMEM263Q8WUH6 116 aaKnown RBP9.55□□□□□ -0.88
SPCS3-204ENST00000513139 SAT2Q96F10 170 aaPredicted RBP9.55□□□□□ -0.88
SPCS3-204ENST00000513139 ACTR3CQ9C0K3 210 aaPredicted RBP9.55□□□□□ -0.88
SPCS3-204ENST00000513139 MDFICQ9P1T7 246 aa9.55□□□□□ -0.88
SPCS3-204ENST00000513139 TRBV19A0A075B6N1 114 aa9.54□□□□□ -0.88
SPCS3-204ENST00000513139 A0A0J9YY99 117 aa9.54□□□□□ -0.88
SPCS3-204ENST00000513139 NDUFB4O95168 129 aa9.54□□□□□ -0.88
SPCS3-204ENST00000513139 SMR3BP02814 79 aaPredicted RBP9.54□□□□□ -0.88
SPCS3-204ENST00000513139 NBEAP1P0C6P0 100 aa9.54□□□□□ -0.88
SPCS3-204ENST00000513139 FUSP35637 526 aaKnown RBP eCLIP9.54□□□□□ -0.88
SPCS3-204ENST00000513139 Q6ZSN1 163 aa9.54□□□□□ -0.88
SPCS3-204ENST00000513139 ZNF331Q9NQX6 463 aaPredicted RBP9.54□□□□□ -0.88
SPCS3-204ENST00000513139 STAG3L2P0CL84 134 aa9.53□□□□□ -0.88
SPCS3-204ENST00000513139 STAG3L3P0CL85 134 aa9.53□□□□□ -0.88
SPCS3-204ENST00000513139 ARL14EPLP0DKL9 152 aa9.53□□□□□ -0.88
SPCS3-204ENST00000513139 HTN1P15515 57 aa9.53□□□□□ -0.88
SPCS3-204ENST00000513139 HOXA5P20719 270 aa9.53□□□□□ -0.88
SPCS3-204ENST00000513139 TAS2R45P59539 299 aa9.53□□□□□ -0.88
SPCS3-204ENST00000513139 KHDC3LQ587J8 217 aa9.53□□□□□ -0.88
SPCS3-204ENST00000513139 LCN15Q6UWW0 184 aa9.53□□□□□ -0.88
SPCS3-204ENST00000513139 SIVA1O15304 175 aa9.52□□□□□ -0.89
SPCS3-204ENST00000513139 FGF8P55075 233 aaPredicted RBP9.52□□□□□ -0.89
SPCS3-204ENST00000513139 UBE2L3P68036 154 aaKnown RBP9.52□□□□□ -0.89
SPCS3-204ENST00000513139 PSG3Q16557 428 aa9.52□□□□□ -0.89
SPCS3-204ENST00000513139 GUK1Q16774 197 aa9.52□□□□□ -0.89
SPCS3-204ENST00000513139 NFE4Q86UQ8 179 aa9.52□□□□□ -0.89
SPCS3-204ENST00000513139 EXOC3-AS1Q8N2X6 119 aa9.52□□□□□ -0.89
SPCS3-204ENST00000513139 FAM213BQ8TBF2 198 aa9.52□□□□□ -0.89
SPCS3-204ENST00000513139 PHYHIPLQ96FC7 376 aa9.52□□□□□ -0.89
SPCS3-204ENST00000513139 TMPRSS5Q9H3S3 457 aa9.52□□□□□ -0.89
SPCS3-204ENST00000513139 A0A087WTM6 91 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 CTXND1A0A1B0GTU2 59 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 PRAC2D3DTV9 90 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 H7BYZ3 331 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 GCHFRP30047 84 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 RANP62826 216 aaKnown RBP9.51□□□□□ -0.89
SPCS3-204ENST00000513139 ANKRD39Q53RE8 183 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 PQLC2Q6ZP29 291 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 ZNF738Q8NE65 137 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 OR8A1Q8NGG7 326 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 C20orf144Q9BQM9 153 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 PPP1R14DQ9NXH3 145 aa9.51□□□□□ -0.89
SPCS3-204ENST00000513139 A0A096LPF7 62 aa9.5□□□□□ -0.89
SPCS3-204ENST00000513139 UMAD1C9J7I0 102 aa9.5□□□□□ -0.89
SPCS3-204ENST00000513139 M0R3E3 92 aa9.5□□□□□ -0.89
SPCS3-204ENST00000513139 CXorf1O96002 111 aa9.5□□□□□ -0.89
SPCS3-204ENST00000513139 GCSHP23434 173 aa9.5□□□□□ -0.89
SPCS3-204ENST00000513139 CDKN1BP46527 198 aa9.5□□□□□ -0.89
SPCS3-204ENST00000513139 HIST1H1AQ02539 215 aaPredicted RBP9.5□□□□□ -0.89
SPCS3-204ENST00000513139 FAM74A1Q5RGS3 127 aa9.5□□□□□ -0.89
SPCS3-204ENST00000513139 EIF5AL1Q6IS14 154 aaKnown RBP9.5□□□□□ -0.89
SPCS3-204ENST00000513139 IQCF2Q8IXL9 164 aa9.5□□□□□ -0.89
SPCS3-204ENST00000513139 RPUSD4Q96CM3 377 aaKnown RBP9.5□□□□□ -0.89
SPCS3-204ENST00000513139 A0A1B0GV50 99 aa9.49□□□□□ -0.89
SPCS3-204ENST00000513139 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms