RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ODF3Q96PU9 254 aa6.04□□□□□ -1.44
PDPN-209ENST00000510906 C20orf144Q9BQM9 153 aa6.04□□□□□ -1.44
PDPN-209ENST00000510906 NOP10Q9NPE3 64 aaKnown RBP6.04□□□□□ -1.44
PDPN-209ENST00000510906 TIMM9Q9Y5J7 89 aa6.04□□□□□ -1.44
PDPN-209ENST00000510906 FAT2Q9NYQ8 4349 aa6.04□□□□□ -1.44
PDPN-209ENST00000510906 IGLV2-18A0A075B6J9 118 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 IGKV2-40A0A087WW87 121 aaPredicted RBP6.03□□□□□ -1.44
PDPN-209ENST00000510906 TRAV12-3A0A0B4J271 114 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 F5H768 121 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 IGKV2D-40P01614 121 aaPredicted RBP6.03□□□□□ -1.44
PDPN-209ENST00000510906 PDE6HQ13956 83 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 ZNF493Q6ZR52 646 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 ATP5SQ99766 215 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 KRTAP9-9Q9BYP9 154 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 SMIM3Q9BZL3 60 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 AGPAT4-IT1Q9H0P7 198 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 KCNIP2Q9NS61 270 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 MBD2Q9UBB5 411 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 PRELID1Q9Y255 219 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 HSPB11Q9Y547 144 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 TIMM8BQ9Y5J9 83 aaPredicted RBP6.03□□□□□ -1.44
PDPN-209ENST00000510906 DNAH17Q9UFH2 4485 aa6.03□□□□□ -1.44
PDPN-209ENST00000510906 C17orf112F2Z3M2 114 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 EIF3GO75821 320 aaKnown RBP eCLIP6.02□□□□□ -1.45
PDPN-209ENST00000510906 SLPIP03973 132 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 ATP5G1P05496 136 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 OR10J4P0C629 311 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 NBEAP1P0C6P0 100 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 RPL12P30050 165 aaKnown RBP6.02□□□□□ -1.45
PDPN-209ENST00000510906 ATP5G3P48201 142 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 BTN1A1Q13410 526 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 FAM122CQ6P4D5 195 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 C15orf53Q8NAA6 179 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 FXYD5Q96DB9 178 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 PHYHIPLQ96FC7 376 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 PAXXQ9BUH6 204 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 MRPL32Q9BYC8 188 aaKnown RBP6.02□□□□□ -1.45
PDPN-209ENST00000510906 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 OR51M1Q9H341 326 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 AAMDCQ9H7C9 122 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 WFDC1Q9HC57 220 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 FUT9Q9Y231 359 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 COX11Q9Y6N1 276 aa6.02□□□□□ -1.45
PDPN-209ENST00000510906 C7orf71A4D174 169 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 KLLNB2CW77 178 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 RTL8CO15255 209 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 GAGE7O76087 117 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 NUDT3O95989 172 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 SLC25A5P05141 298 aaKnown RBP6.01□□□□□ -1.45
PDPN-209ENST00000510906 GAGE12FP0CL80 117 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 GAGE12GP0CL81 117 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 GAGE12IP0CL82 117 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 PET100P0DJ07 73 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 CD300CQ08708 224 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 LGALS9BQ3B8N2 356 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 RNF212Q495C1 297 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 FFAR4Q5NUL3 377 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 PIK3CD-AS1Q5SR53 167 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 PRR9Q5T870 116 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 C9orf47Q6ZRZ4 202 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 LINC00612Q8N6U2 182 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 FAM19A4Q96LR4 140 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 LINC00477Q96M19 166 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 VGLL1Q99990 258 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 PYGO2Q9BRQ0 406 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 ALG5Q9Y673 324 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 DNAH11Q96DT5 4516 aa6.01□□□□□ -1.45
PDPN-209ENST00000510906 SNURFLB1AK76 121 aa6□□□□□ -1.45
PDPN-209ENST00000510906 USP17L23D6RBM5 183 aa6□□□□□ -1.45
PDPN-209ENST00000510906 OR7C2O60412 319 aa6□□□□□ -1.45
PDPN-209ENST00000510906 ZNF324O75467 553 aaPredicted RBP6□□□□□ -1.45
PDPN-209ENST00000510906 IFNA5P01569 189 aa6□□□□□ -1.45
PDPN-209ENST00000510906 RNASE4P34096 147 aaKnown RBP6□□□□□ -1.45
PDPN-209ENST00000510906 UBE2L3P68036 154 aaKnown RBP6□□□□□ -1.45
PDPN-209ENST00000510906 Q6ZQT7 251 aa6□□□□□ -1.45
PDPN-209ENST00000510906 Q6ZR54 194 aa6□□□□□ -1.45
PDPN-209ENST00000510906 LINC00336Q6ZUF6 198 aa6□□□□□ -1.45
PDPN-209ENST00000510906 ZFAND2AQ8N6M9 145 aa6□□□□□ -1.45
PDPN-209ENST00000510906 Q8TAT8 98 aa6□□□□□ -1.45
PDPN-209ENST00000510906 SCGB1C1Q8TD33 95 aa6□□□□□ -1.45
PDPN-209ENST00000510906 GSN-AS1Q9NRJ2 163 aa6□□□□□ -1.45
PDPN-209ENST00000510906 DYNC1H1Q14204 4646 aaKnown RBP6□□□□□ -1.45
PDPN-209ENST00000510906 PKHD1P08F94 4074 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 A0A1B0GVY2 172 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 GPX1P07203 203 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 CRISP2P16562 243 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 RANP62826 216 aaKnown RBP5.99□□□□□ -1.45
PDPN-209ENST00000510906 DAZ2Q13117 558 aaKnown RBP5.99□□□□□ -1.45
PDPN-209ENST00000510906 OR5I1Q13606 314 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 TMEM78Q5T7P6 136 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 Q6ZTI0 123 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 C11orf72Q8NBR9 251 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 ATG101Q9BSB4 218 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 Q9H3A6 140 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 ZNF492Q9P255 531 aa5.99□□□□□ -1.45
PDPN-209ENST00000510906 TRAV26-1A0A087WT03 109 aa5.98□□□□□ -1.45
PDPN-209ENST00000510906 A0A0J9YY99 117 aa5.98□□□□□ -1.45
PDPN-209ENST00000510906 ZNF138P52744 262 aa5.98□□□□□ -1.45
PDPN-209ENST00000510906 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms