RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 LYRM9A8MSI8 78 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 HMGB3O15347 200 aaKnown RBP3.44□□□□□ -1.86
HTT-206ENST00000509618 ARPC5O15511 151 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 EIF3GO75821 320 aaKnown RBP eCLIP3.44□□□□□ -1.86
HTT-206ENST00000509618 MBP02144 154 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 PRM2P04554 102 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 SLC25A5P05141 298 aaKnown RBP3.44□□□□□ -1.86
HTT-206ENST00000509618 CT45A10P0DMU9 189 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 RNASE4P34096 147 aaKnown RBP3.44□□□□□ -1.86
HTT-206ENST00000509618 CDC34P49427 236 aaPredicted RBP3.44□□□□□ -1.86
HTT-206ENST00000509618 SUMO1P63165 101 aaKnown RBP3.44□□□□□ -1.86
HTT-206ENST00000509618 Q5BKY6 102 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 GFI1BQ5VTD9 330 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 PQLC2Q6ZP29 291 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 UBE2DNLQ8IWF7 75 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 IQCF2Q8IXL9 164 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 SVIPQ8NHG7 77 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 FXYD5Q96DB9 178 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 GNPNAT1Q96EK6 184 aaPredicted RBP3.44□□□□□ -1.86
HTT-206ENST00000509618 C16orf74Q96GX8 76 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 LINC00477Q96M19 166 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 ODF3Q96PU9 254 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 C20orf144Q9BQM9 153 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 NDUFAF3Q9BU61 184 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 Q9H3A6 140 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 DKK2Q9UBU2 259 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 RPH3ALQ9UNE2 315 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 TNFSF18Q9UNG2 199 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 FAT3Q8TDW7 4589 aa3.44□□□□□ -1.86
HTT-206ENST00000509618 C7orf71A4D174 169 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 RNF222A6NCQ9 220 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 PGPA6NDG6 321 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 KRTAP29-1A8MX34 341 aaPredicted RBP3.43□□□□□ -1.86
HTT-206ENST00000509618 SNURFLB1AK76 121 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 GPX1P07203 203 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 ARL14EPLP0DKL9 152 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 AZU1P20160 251 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 ATP6V0CP27449 155 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 SERF2P84101 59 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 KIR3DS1Q14943 382 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 AKR1C8PQ5T2L2 129 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 RPL7L1Q6DKI1 246 aaKnown RBP3.43□□□□□ -1.86
HTT-206ENST00000509618 ZNF493Q6ZR52 646 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 C6orf223Q8N319 242 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 OR2G3Q8NGZ4 309 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 Q8TAT8 98 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 RXFP4Q8TDU9 374 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 TMEM263Q8WUH6 116 aaKnown RBP3.43□□□□□ -1.86
HTT-206ENST00000509618 VGLL1Q99990 258 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 PYGO2Q9BRQ0 406 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 PSMG3Q9BT73 122 aaPredicted RBP3.43□□□□□ -1.86
HTT-206ENST00000509618 SSBP4Q9BWG4 385 aaPredicted RBP3.43□□□□□ -1.86
HTT-206ENST00000509618 ACTR3CQ9C0K3 210 aaPredicted RBP3.43□□□□□ -1.86
HTT-206ENST00000509618 AGPAT4-IT1Q9H0P7 198 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 SH3BGRL3Q9H299 93 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 NOP10Q9NPE3 64 aaKnown RBP3.43□□□□□ -1.86
HTT-206ENST00000509618 OTORQ9NRC9 128 aa3.43□□□□□ -1.86
HTT-206ENST00000509618 TIMM8BQ9Y5J9 83 aaPredicted RBP3.43□□□□□ -1.86
HTT-206ENST00000509618 NBDYA0A0U1RRE5 68 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 RBAKDNA6NC62 111 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 CBY3A6NI87 242 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 F5H768 121 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 SMLR1H3BR10 107 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 TAAR5O14804 337 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 ATP5G1P05496 136 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 ATP5G3P48201 142 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 ZNF138P52744 262 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 CD300CQ08708 224 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 BTN1A1Q13410 526 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 SOHLH1Q5JUK2 328 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 C9orf47Q6ZRZ4 202 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 GOLT1AQ6ZVE7 132 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 ZNF680Q8NEM1 530 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 ZNRF2Q8NHG8 242 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 RNASE8Q8TDE3 154 aaKnown RBP3.42□□□□□ -1.86
HTT-206ENST00000509618 FRZBQ92765 325 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 RAB24Q969Q5 203 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 FAM210BQ96KR6 192 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 ARPC5LQ9BPX5 153 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 TMEM167BQ9NRX6 74 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 ZNF492Q9P255 531 aa3.42□□□□□ -1.86
HTT-206ENST00000509618 TRGV2A0A075B6R0 118 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 KANTRA0A1W2PQU2 76 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 GAGE12BA1L429 117 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 PLAC8L1A1L4L8 177 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 KLLNB2CW77 178 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 DIRC3C9JPN6 131 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 K7EQM0 130 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 PFDN1O60925 122 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 GAGE7O76087 117 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 CXorf1O96002 111 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 IFNA7P01567 189 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 NMBP08949 121 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 GAGE12FP0CL80 117 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 GAGE12GP0CL81 117 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 GAGE12IP0CL82 117 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 STAG3L2P0CL84 134 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 STAG3L3P0CL85 134 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 CRISP2P16562 243 aa3.41□□□□□ -1.86
HTT-206ENST00000509618 GCHFRP30047 84 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms