RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 DNAH10Q8IVF4 4471 aa13.07□□□□□ -0.32
UBE3D-207ENST00000509102 BORCS7-ASMTA0A0B4J1R7 106 aa13.07□□□□□ -0.32
UBE3D-207ENST00000509102 TCL1AP56279 114 aa13.07□□□□□ -0.32
UBE3D-207ENST00000509102 ZNF415Q09FC8 603 aa13.07□□□□□ -0.32
UBE3D-207ENST00000509102 ARL6IP6Q8N6S5 226 aa13.07□□□□□ -0.32
UBE3D-207ENST00000509102 C11orf72Q8NBR9 251 aa13.07□□□□□ -0.32
UBE3D-207ENST00000509102 TMED6Q8WW62 240 aa13.07□□□□□ -0.32
UBE3D-207ENST00000509102 FXYD6-FXYD2A0A087WZ82 144 aa13.06□□□□□ -0.32
UBE3D-207ENST00000509102 HMGB3O15347 200 aaKnown RBP13.06□□□□□ -0.32
UBE3D-207ENST00000509102 EIF3GO75821 320 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBE3D-207ENST00000509102 ATP6V0CP27449 155 aa13.06□□□□□ -0.32
UBE3D-207ENST00000509102 PRR9Q5T870 116 aa13.06□□□□□ -0.32
UBE3D-207ENST00000509102 TMPRSS5Q9H3S3 457 aa13.06□□□□□ -0.32
UBE3D-207ENST00000509102 H3BNG1 76 aa13.05□□□□□ -0.32
UBE3D-207ENST00000509102 ARL14EPLP0DKL9 152 aa13.05□□□□□ -0.32
UBE3D-207ENST00000509102 FAM159AQ6UWV7 190 aa13.05□□□□□ -0.32
UBE3D-207ENST00000509102 OR2T35Q8NGX2 323 aa13.05□□□□□ -0.32
UBE3D-207ENST00000509102 C18orf15Q96N68 181 aa13.05□□□□□ -0.32
UBE3D-207ENST00000509102 A0A0J9YY99 117 aa13.04□□□□□ -0.32
UBE3D-207ENST00000509102 K7EQM0 130 aa13.04□□□□□ -0.32
UBE3D-207ENST00000509102 GOLT1AQ6ZVE7 132 aa13.04□□□□□ -0.32
UBE3D-207ENST00000509102 RAB24Q969Q5 203 aa13.04□□□□□ -0.32
UBE3D-207ENST00000509102 ACTR3CQ9C0K3 210 aaPredicted RBP13.04□□□□□ -0.32
UBE3D-207ENST00000509102 KLF12Q9Y4X4 402 aa13.04□□□□□ -0.32
UBE3D-207ENST00000509102 TRGV11A0A075B6L2 103 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 SERTM2A0A1B0GWG4 89 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 PRSS29PA6NIE9 313 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 SPINK4O60575 86 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 STAG3L2P0CL84 134 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 STAG3L3P0CL85 134 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 HOXA5P20719 270 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 MUC21Q5SSG8 566 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 Q6ZR54 194 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 ST6GAL2Q96JF0 529 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 NDFIP1Q9BT67 221 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 TMEM167BQ9NRX6 74 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 TNFSF18Q9UNG2 199 aa13.03□□□□□ -0.32
UBE3D-207ENST00000509102 CXorf1O96002 111 aa13.02□□□□□ -0.33
UBE3D-207ENST00000509102 Q5BKY6 102 aa13.02□□□□□ -0.33
UBE3D-207ENST00000509102 C1orf134Q5TEV5 83 aa13.02□□□□□ -0.33
UBE3D-207ENST00000509102 Q6AWC8 147 aa13.02□□□□□ -0.33
UBE3D-207ENST00000509102 SSX7Q7RTT5 188 aa13.02□□□□□ -0.33
UBE3D-207ENST00000509102 TP53TG3Q9ULZ0 132 aa13.02□□□□□ -0.33
UBE3D-207ENST00000509102 LCE2BO14633 110 aa13.01□□□□□ -0.33
UBE3D-207ENST00000509102 GCHFRP30047 84 aa13.01□□□□□ -0.33
UBE3D-207ENST00000509102 IQCF2Q8IXL9 164 aa13.01□□□□□ -0.33
UBE3D-207ENST00000509102 C5orf17Q8NAS9 161 aa13.01□□□□□ -0.33
UBE3D-207ENST00000509102 SH3BGRL3Q9H299 93 aa13.01□□□□□ -0.33
UBE3D-207ENST00000509102 NAGKQ9UJ70 344 aa13.01□□□□□ -0.33
UBE3D-207ENST00000509102 LINC00588Q9Y4M8 146 aa13.01□□□□□ -0.33
UBE3D-207ENST00000509102 TRAV21A0A0B4J279 112 aa13□□□□□ -0.33
UBE3D-207ENST00000509102 RNF222A6NCQ9 220 aa13□□□□□ -0.33
UBE3D-207ENST00000509102 SLAQ13239 276 aa13□□□□□ -0.33
UBE3D-207ENST00000509102 RPL7L1Q6DKI1 246 aaKnown RBP13□□□□□ -0.33
UBE3D-207ENST00000509102 ZNRF2Q8NHG8 242 aa13□□□□□ -0.33
UBE3D-207ENST00000509102 SPXQ9BT56 116 aa13□□□□□ -0.33
UBE3D-207ENST00000509102 TREM1Q9NP99 234 aa13□□□□□ -0.33
UBE3D-207ENST00000509102 MRPL16Q9NX20 251 aaKnown RBP13□□□□□ -0.33
UBE3D-207ENST00000509102 NBDYA0A0U1RRE5 68 aa12.99□□□□□ -0.33
UBE3D-207ENST00000509102 TAAR5O14804 337 aa12.99□□□□□ -0.33
UBE3D-207ENST00000509102 RTL8CO15255 209 aa12.99□□□□□ -0.33
UBE3D-207ENST00000509102 TMEM183BQ1AE95 376 aa12.99□□□□□ -0.33
UBE3D-207ENST00000509102 Q6ZQT7 251 aa12.99□□□□□ -0.33
UBE3D-207ENST00000509102 TMEM183AQ8IXX5 376 aa12.99□□□□□ -0.33
UBE3D-207ENST00000509102 NACAE9PAV3 2078 aa12.99□□□□□ -0.33
UBE3D-207ENST00000509102 GNG5P63218 68 aa12.98□□□□□ -0.33
UBE3D-207ENST00000509102 TRAV8-1A0A0A6YYK1 113 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 FBLL1A6NHQ2 334 aaKnown RBP12.97□□□□□ -0.33
UBE3D-207ENST00000509102 ARPC5O15511 151 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 PAX4O43316 350 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 IGHV3-53P01767 116 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 TCRAP04437 139 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 TDRG1Q3Y452 100 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 ZFP69Q49AA0 526 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 TTC32Q5I0X7 151 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 AKR1C8PQ5T2L2 129 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 SUN5Q8TC36 379 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 KCNS1Q96KK3 526 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 SDF2L1Q9HCN8 221 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 PRO0255Q9UI72 69 aa12.97□□□□□ -0.33
UBE3D-207ENST00000509102 CTXND1A0A1B0GTU2 59 aa12.96□□□□□ -0.33
UBE3D-207ENST00000509102 F6UZH7 168 aa12.96□□□□□ -0.33
UBE3D-207ENST00000509102 SUMO1P63165 101 aaKnown RBP12.96□□□□□ -0.33
UBE3D-207ENST00000509102 Q9H8V8 135 aa12.96□□□□□ -0.33
UBE3D-207ENST00000509102 MDFICQ9P1T7 246 aa12.96□□□□□ -0.33
UBE3D-207ENST00000509102 ICOSQ9Y6W8 199 aa12.96□□□□□ -0.33
UBE3D-207ENST00000509102 TRGV4A0A0C4DH28 118 aa12.95□□□□□ -0.34
UBE3D-207ENST00000509102 CYB561D1Q8N8Q1 229 aa12.95□□□□□ -0.34
UBE3D-207ENST00000509102 VSIG2Q96IQ7 327 aa12.95□□□□□ -0.34
UBE3D-207ENST00000509102 HHLA3Q9XRX5 114 aa12.95□□□□□ -0.34
UBE3D-207ENST00000509102 HECTD4Q9Y4D8 3996 aa12.95□□□□□ -0.34
UBE3D-207ENST00000509102 A0A096LPF7 62 aa12.94□□□□□ -0.34
UBE3D-207ENST00000509102 A0A1W2PRE2 83 aa12.94□□□□□ -0.34
UBE3D-207ENST00000509102 ESRGQ1W209 222 aa12.94□□□□□ -0.34
UBE3D-207ENST00000509102 C6orf223Q8N319 242 aa12.94□□□□□ -0.34
UBE3D-207ENST00000509102 RASL10AQ92737 203 aa12.94□□□□□ -0.34
UBE3D-207ENST00000509102 SGK494Q96LW2 274 aa12.94□□□□□ -0.34
UBE3D-207ENST00000509102 UPK3BQ9BT76 320 aa12.94□□□□□ -0.34
UBE3D-207ENST00000509102 EPDR1Q9UM22 224 aa12.94□□□□□ -0.34
UBE3D-207ENST00000509102 PSG8Q9UQ74 426 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms