RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 ZNF471Q9BX82 626 aaPredicted RBP12□□□□□ -0.49
CLDND1-219ENST00000508659 GGTLC3B5MD39 225 aa11.99□□□□□ -0.49
CLDND1-219ENST00000508659 F5H768 121 aa11.99□□□□□ -0.49
CLDND1-219ENST00000508659 K7EQM0 130 aa11.99□□□□□ -0.49
CLDND1-219ENST00000508659 ANXA2RQ3ZCQ2 193 aa11.99□□□□□ -0.49
CLDND1-219ENST00000508659 TMEM88Q6PEY1 159 aa11.99□□□□□ -0.49
CLDND1-219ENST00000508659 NDFIP1Q9BT67 221 aa11.99□□□□□ -0.49
CLDND1-219ENST00000508659 IGHV1OR15-1A0A075B7D0 117 aa11.98□□□□□ -0.49
CLDND1-219ENST00000508659 TRAV8-1A0A0A6YYK1 113 aa11.98□□□□□ -0.49
CLDND1-219ENST00000508659 MAP1LC3B2A6NCE7 125 aa11.98□□□□□ -0.49
CLDND1-219ENST00000508659 PFDN1O60925 122 aa11.98□□□□□ -0.49
CLDND1-219ENST00000508659 TCRAP04437 139 aa11.98□□□□□ -0.49
CLDND1-219ENST00000508659 MAP1LC3BQ9GZQ8 125 aa11.98□□□□□ -0.49
CLDND1-219ENST00000508659 GSN-AS1Q9NRJ2 163 aa11.98□□□□□ -0.49
CLDND1-219ENST00000508659 A0A1W2PRE2 83 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 GAGE12BA1L429 117 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 GAGE7O76087 117 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 GAGE12FP0CL80 117 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 GAGE12GP0CL81 117 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 GAGE12IP0CL82 117 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 P0DMU3 169 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 FAM231AP0DMU4 169 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 FAM231CP0DMU5 169 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 FGF8P55075 233 aaPredicted RBP11.97□□□□□ -0.49
CLDND1-219ENST00000508659 EIF5AP63241 154 aaKnown RBP11.97□□□□□ -0.49
CLDND1-219ENST00000508659 DAZ2Q13117 558 aaKnown RBP11.97□□□□□ -0.49
CLDND1-219ENST00000508659 IBA57Q5T440 356 aaKnown RBP11.97□□□□□ -0.49
CLDND1-219ENST00000508659 Q6AWC8 147 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 C11orf72Q8NBR9 251 aa11.97□□□□□ -0.49
CLDND1-219ENST00000508659 KMT2AQ03164 3969 aa11.96□□□□□ -0.49
CLDND1-219ENST00000508659 F6UZH7 168 aa11.96□□□□□ -0.49
CLDND1-219ENST00000508659 SUMO1P63165 101 aaKnown RBP11.96□□□□□ -0.49
CLDND1-219ENST00000508659 MUC21Q5SSG8 566 aa11.96□□□□□ -0.49
CLDND1-219ENST00000508659 Q6ZQT7 251 aa11.96□□□□□ -0.49
CLDND1-219ENST00000508659 LINC00612Q8N6U2 182 aa11.96□□□□□ -0.49
CLDND1-219ENST00000508659 CYB561D1Q8N8Q1 229 aa11.96□□□□□ -0.49
CLDND1-219ENST00000508659 C15orf53Q8NAA6 179 aa11.96□□□□□ -0.49
CLDND1-219ENST00000508659 TREM1Q9NP99 234 aa11.96□□□□□ -0.49
CLDND1-219ENST00000508659 SEC11BP0C7V7 166 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 TCL1AP56279 114 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 UBE2G2P60604 165 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 ZNF415Q09FC8 603 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 FAM159AQ6UWV7 190 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 UBE2DNLQ8IWF7 75 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 TCTE3Q8IZS6 198 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 STOML3Q8TAV4 291 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 SGK494Q96LW2 274 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 ATG101Q9BSB4 218 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 TMPRSS5Q9H3S3 457 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 NAGKQ9UJ70 344 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 TP53TG3Q9ULZ0 132 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 EPDR1Q9UM22 224 aa11.95□□□□□ -0.5
CLDND1-219ENST00000508659 TRGV2A0A075B6R0 118 aa11.94□□□□□ -0.5
CLDND1-219ENST00000508659 TRGV1A0A0A0MS02 117 aa11.94□□□□□ -0.5
CLDND1-219ENST00000508659 TRAV21A0A0B4J279 112 aa11.94□□□□□ -0.5
CLDND1-219ENST00000508659 UMAD1C9J7I0 102 aa11.94□□□□□ -0.5
CLDND1-219ENST00000508659 IFNA7P01567 189 aa11.94□□□□□ -0.5
CLDND1-219ENST00000508659 TPT1P13693 172 aaKnown RBP11.94□□□□□ -0.5
CLDND1-219ENST00000508659 ZFP69Q49AA0 526 aa11.94□□□□□ -0.5
CLDND1-219ENST00000508659 Q6ZNX1 250 aa11.94□□□□□ -0.5
CLDND1-219ENST00000508659 Q6ZTI0 123 aa11.94□□□□□ -0.5
CLDND1-219ENST00000508659 TMUB2Q71RG4 321 aa11.94□□□□□ -0.5
CLDND1-219ENST00000508659 TMEM75Q8N9X5 138 aa11.94□□□□□ -0.5
CLDND1-219ENST00000508659 TRGV11A0A075B6L2 103 aa11.93□□□□□ -0.5
CLDND1-219ENST00000508659 FHITP49789 147 aa11.93□□□□□ -0.5
CLDND1-219ENST00000508659 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
CLDND1-219ENST00000508659 NKX6-2Q9C056 277 aaPredicted RBP11.93□□□□□ -0.5
CLDND1-219ENST00000508659 KLF12Q9Y4X4 402 aa11.93□□□□□ -0.5
CLDND1-219ENST00000508659 hCG_2014768A0A024R1R8 64 aa11.92□□□□□ -0.5
CLDND1-219ENST00000508659 FBLL1A6NHQ2 334 aaKnown RBP11.92□□□□□ -0.5
CLDND1-219ENST00000508659 FAM74A7A6NL05 159 aa11.92□□□□□ -0.5
CLDND1-219ENST00000508659 PPT1P50897 306 aa11.92□□□□□ -0.5
CLDND1-219ENST00000508659 FLI1Q01543 452 aaPredicted RBP11.92□□□□□ -0.5
CLDND1-219ENST00000508659 OR5I1Q13606 314 aa11.92□□□□□ -0.5
CLDND1-219ENST00000508659 TMEM183BQ1AE95 376 aa11.92□□□□□ -0.5
CLDND1-219ENST00000508659 TMEM183AQ8IXX5 376 aa11.92□□□□□ -0.5
CLDND1-219ENST00000508659 POM121L12Q8N7R1 296 aa11.92□□□□□ -0.5
CLDND1-219ENST00000508659 TVP23CQ96ET8 276 aa11.92□□□□□ -0.5
CLDND1-219ENST00000508659 PSG8Q9UQ74 426 aa11.92□□□□□ -0.5
CLDND1-219ENST00000508659 VPS13DQ5THJ4 4388 aa11.92□□□□□ -0.5
CLDND1-219ENST00000508659 PEX7O00628 323 aa11.91□□□□□ -0.5
CLDND1-219ENST00000508659 SPINK4O60575 86 aa11.91□□□□□ -0.5
CLDND1-219ENST00000508659 NUDT3O95989 172 aa11.91□□□□□ -0.5
CLDND1-219ENST00000508659 DPPA3Q6W0C5 159 aa11.91□□□□□ -0.5
CLDND1-219ENST00000508659 PRNTQ86SH4 94 aa11.91□□□□□ -0.5
CLDND1-219ENST00000508659 AKAP14Q86UN6 197 aa11.91□□□□□ -0.5
CLDND1-219ENST00000508659 MRPL16Q9NX20 251 aaKnown RBP11.91□□□□□ -0.5
CLDND1-219ENST00000508659 IGLV2-11P01706 119 aa11.9□□□□□ -0.5
CLDND1-219ENST00000508659 HIST1H2BAQ96A08 127 aa11.9□□□□□ -0.5
CLDND1-219ENST00000508659 C18orf15Q96N68 181 aa11.9□□□□□ -0.5
CLDND1-219ENST00000508659 C8orf49Q96NF6 230 aa11.9□□□□□ -0.5
CLDND1-219ENST00000508659 SDF2L1Q9HCN8 221 aa11.9□□□□□ -0.5
CLDND1-219ENST00000508659 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
CLDND1-219ENST00000508659 TRAV26-1A0A087WT03 109 aa11.89□□□□□ -0.51
CLDND1-219ENST00000508659 GCGP01275 180 aa11.89□□□□□ -0.51
CLDND1-219ENST00000508659 C1QBP02746 253 aa11.89□□□□□ -0.51
CLDND1-219ENST00000508659 HOXA5P20719 270 aa11.89□□□□□ -0.51
CLDND1-219ENST00000508659 LGALS9BQ3B8N2 356 aa11.89□□□□□ -0.51
CLDND1-219ENST00000508659 TDRG1Q3Y452 100 aa11.89□□□□□ -0.51
CLDND1-219ENST00000508659 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms